GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:52:50

Sequence gi568815595r:32383963_32602745 : 218783 bp : 42.72% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7945   8103  159  0  0   72  115   136 0.330  12.58
 1.02 Term +   8256   8660  405  2  0   23   53   170 0.272   1.20
 1.03 PlyA +   9887   9892    6                               1.05

 2.08 PlyA -  13286  13281    6                               1.05
 2.07 Term -  21393  20951  443  1  2   51   48   207 0.512   7.43
 2.06 Intr -  30455  30343  113  1  2   28   51   164 0.053   5.80
 2.05 Intr -  35483  35427   57  1  0   84  116    44 0.483   3.88
 2.04 Intr -  36752  36605  148  0  1   96   92    63 0.320   5.87
 2.03 Intr -  39668  39599   70  2  1   78   27    65 0.140  -2.76
 2.02 Intr -  40323  40206  118  2  1   78   72    83 0.389   5.25
 2.01 Init -  45038  44872  167  2  2   70   86   189 0.894  16.05
 2.00 Prom -  45242  45203   40                             -11.24

 3.00 Prom +  46957  46996   40                              -5.45
 3.01 Init +  52309  52392   84  0  0   96   35    79 0.157   4.27
 3.02 Intr +  57878  58051  174  1  0   93  103   165 0.874  17.71
 3.03 Intr +  65492  65590   99  1  0  127   77   127 0.824  14.89
 3.04 Intr +  68430  68511   82  2  1  116  109    24 0.563   5.59
 3.05 Intr +  70311  70398   88  1  1   18   56    42 0.108  -7.89
 3.06 Intr +  71436  71730  295  0  1   11   94   239 0.445  12.89
 3.07 Intr +  73914  74041  128  2  2   80   60    86 0.438   3.56
 3.08 Intr +  84882  85080  199  0  1   39   43   197 0.117   8.73
 3.09 Term +  87025  87297  273  0  0  -40   48   399 0.453  17.59
 3.10 PlyA +  90499  90504    6                               1.05

 4.05 PlyA -  93982  93977    6                               1.05
 4.04 Term - 100135  99998  138  1  0  141   43    72 0.931   4.98
 4.03 Intr - 107924 107748  177  2  0   64  111    12 0.457   0.29
 4.02 Intr - 109951 109868   84  1  0   57  100    52 0.623   2.40
 4.01 Init - 118783 118646  138  1  0   87  105    98 0.967  11.60
 4.00 Prom - 119879 119840   40                             -11.54

 5.00 Prom + 121799 121838   40                              -8.65
 5.01 Sngl + 123993 124370  378  2  0   66   45   277 0.704  17.11
 5.02 PlyA + 124594 124599    6                               1.05

 6.10 PlyA - 126698 126693    6                               1.05
 6.09 Term - 142946 142837  110  0  2   80   49   134 0.999   6.39
 6.08 Intr - 144639 144484  156  1  0  102   85    47 0.682   4.86
 6.07 Intr - 145698 145578  121  0  1   71   83   116 0.999   8.55
 6.06 Intr - 146558 146499   60  2  0   72   80    57 0.693   1.31
 6.05 Intr - 157244 157075  170  0  2   64   96    94 0.672   6.54
 6.04 Intr - 161144 160914  231  0  0   92   84   149 0.996  11.72
 6.03 Intr - 162003 161887  117  1  0   79  101    85 0.995   8.42
 6.02 Intr - 186457 186384   74  0  2  112  106    11 0.936   3.43
 6.01 Init - 186808 186663  146  1  2  104   25   169 0.982  11.87
 6.00 Prom - 188929 188890   40                              -6.85

 7.00 Prom + 196870 196909   40                              -7.15
 7.01 Init + 198442 198544  103  0  1   85  113    32 0.813   5.85
 7.02 Intr + 208715 209085  371  0  2   75  -33   333 0.146  13.80
 7.03 Term + 213012 213245  234  2  0   78   47   151 0.210   5.34
 7.04 PlyA + 213249 213254    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  30455  30299  157  1  1   28   46   221 0.840   8.32
S.002 Term - 186178 186069  110  2  2   93   43    60 0.854  -0.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_1|187_aa
MSHGAGLVRTTCSSGSALGPGAGAAQPSASPLEGLLDLSYPRTHAALLKVAQMASSGKVA
AAAPALELSPQSRPGPCSRGPRSPGSQVSPATPLRSLTRLLTETTGKVPFRLSSSSLGRA
ASNPSRGWKSRPGGGAEGAKPDLFPVHGLLFPPNPARQGFPALCAVSLEGGGQRVLCSIV
GKKNWDR

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_1|564_bp
atgtcgcacggagccgggctcgtccgcaccacgtgcagcagcggcagcgcgctcggaccc
ggggccggcgcggcccagcccagcgcgagccccttggaggggctgctggacctcagctac
ccccgcacccacgcggccctgctgaaagtggcgcaaatggcttcctccgggaaagttgct
gccgcagcccccgcgctggagctcagtccccagagccgccccggcccttgctcccgcgga
cccaggtcgccagggtcgcaagtttctccggccacccccctgcgaagcctgacccgccta
ctgactgaaaccacgggcaaagttccttttcgtctttcttcctcttctctgggccgcgcc
gcttcgaacccgagccgggggtggaagagtcgcccaggcggcggcgctgagggagcgaaa
cccgacctcttccccgtccacggcctcctctttcctccgaacccagcgcggcagggcttc
cctgctctgtgtgcagtttcgctcgaaggaggaggtcagagggtcttgtgttccatagtg
gggaaaaagaactgggaccgttga

>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_2|371_aa
MRLYIHKSYQCKYQRRALVGAGLVQSSKPWLVSEWGQVGHRWAAVICGFPRLSGARLLAL
GTLAPCYERLRALERPCVGVTAHKAASQHQLQCETARGSDGANCWAWGLHALLQVNEEWN
KKPAVVNRPSVRQTVGLWRGHLAPFFLLQPFQPCPQFKGMIIVTCRPREQGKDVFSHILI
LLEVAISNEAIKGALVRNVKDEGTSRDLHQTEAVNAVLKYSGKEGAAIRDPALMQDKKAF
VTALVIYCCTTNYHKLGTLTQHSFIFSQFPRSRSLGRSPLFRVSQDCNKRLARLGVLFRA
HMAVSGFQFLVTIGLKARFLAGCQLRAALASRHDPWMLVTWPLTGPLSTRQFTSSEPAGD
SLPLGRTQYFF

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_2|1116_bp
atgaggctctacattcacaaaagttaccagtgcaaataccagcgcagagccttggtggga
gcaggtctggtgcagtcaagcaaaccctggctggtgtctgagtggggccaggtgggccac
aggtgggcagctgttatctgcggctttccacgactctcaggtgcaaggctgctcgcccta
ggaaccctggcaccatgttatgagaggcttagagcactggagaggccatgtgtaggtgtt
acagcccataaggccgccagccagcatcaactgcaatgtgagacagctagaggctctgac
ggggctaactgctgggcctgggggctccacgctctgcttcaggtcaatgaagaatggaac
aaaaagccagctgtggtaaaccgcccttcagtcaggcagacagtgggactatggcgtgga
caccttgcccctttcttcctcctccagccttttcaaccgtgtccccagttcaaaggcatg
atcattgtgacctgcaggcccagggaacaaggaaaagatgtcttttctcacattcttata
ctgctggaagttgcaataagtaatgaggcaataaaaggagccttagtaagaaatgtcaaa
gatgaggggacgagcagagacttgcaccaaacagaagctgtgaacgcagtgctgaaatac
agcggtaaagaaggagcagccatcagagatccagctttgatgcaggataaaaaggctttt
gtgactgcgttagttatctactgctgcacaaccaattaccacaaacttggcaccttaaca
caacattcatttatcttctcacagtttccacggagcaggagtctggggagaagtccactg
ttcagagtctcacaagactgcaacaagaggttggccaggcttggggtcctcttccgagct
cacatggctgttagtggctttcagtttcttgtaaccataggtctgaaggcccgttttctt
gctggctgtcagctgagggctgctctggcttctaggcatgacccttggatgcttgtgaca
tggcccctcacaggccctctctcaacaaggcagttcacttcttcagagccagcaggagac
tctctccctttgggaaggacccagtacttcttctaa

>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_3|473_aa
MGQVSQPVGVNEIAQRLLDDGDFNREARVTLLIAFICVRSSLWTNYSAYSYFEVVTICDL
IMILAFYLVHLFRFYRVLTCISWPLSELLHYLIGTLLLLIASIVAASKSYNQSGLVAGAI
FGFMATFLCMASIWLSYKISCVTQSTGPSGALQRGGRVLQARPLDLCSCAKVLSGCPILA
SAECCRKWKQPLWALSWSSGATLVAAGQLGASGSVWDDLRKQHPWCIWSRVLLMGGDPVY
QLGWSGNMAELTLAQSAPPGQWNGGVSAEEGTVQPSETLAPLGTVGTQRQSRGCGEPHSP
WILGAFEEGWPELWGLGASPARPTTMSCQHNLIAVIWAFNCHLGAFLWTLPWDLLSGHTV
QLASAAGEFTPCEVTLTNGTQEPKKKEEEEEEEEEEEEEEDRRRTRRRGGEEGEGEEEEK
RRKKKEEEEEKWPYSKIGRWMVHPKPKNIPTASIPQVIRHVATFAQEPEQQRT

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_3|1422_bp
atggggcaggtttctcagccagtgggtgtcaatgagattgcacaaaggctattagatgat
ggtgactttaacagggaggcacgggtcaccctgctgattgccttcatctgtgtgcggagc
tccctgtggaccaactacagcgcctacagctactttgaagtggtcaccatttgcgacttg
ataatgatcctcgccttttacctggtccacctcttccgcttctaccgcgtgctcacctgt
atcagctggcccctgtcggaacttctgcactatttaatcggtaccctgctcctcctcatc
gcctccattgtggcagcttccaagagttacaaccagagcggactggtagccggagcgatc
tttggtttcatggccaccttcctctgcatggcaagcatatggctgtcctataagatctcg
tgtgtaacccagtccacaggcccctcaggagctttgcagagaggaggacgtgtactccag
gcgaggcctctggacctgtgttcctgtgccaaagtcctgtcaggctgccccatccttgcc
tctgctgagtgttgccggaaatggaagcagcccctgtgggctttgagctggagctctggg
gctactcttgtggctgctggccagctcggggcatcgggttctgtctgggatgatctaagg
aagcagcacccgtggtgtatctggagccgagtgctgctgatgggaggggatcctgtgtac
cagctgggctggagcgggaacatggctgagctgaccctggcacagtcggctcctccaggg
caatggaatggaggagtctcagctgaggagggcacggtccagccctcagagacccttgcc
cctctgggcactgtggggacccagaggcagagcagagggtgtggggaacctcatagtccc
tggatcctgggagctttcgaggaaggctggccagagctctggggcctgggtgctagccct
gcaaggcctacgaccatgtcatgccagcataacctgatagctgtgatttgggccttcaac
tgtcaccttggcgctttcctgtggacactgccatgggacctgctcagcggccacacagtg
caacttgcaagtgctgcaggggaattcactccctgtgaggtaacactgaccaatgggaca
caggaaccaaagaagaaggaggaggaggaggaagaggaagaggaagaagaagaagaagaa
gatagaagaaggacaaggaggagaggaggagaggagggggagggggaggaggaggagaaa
agaagaaaaaagaaagaagaagaagaagaaaagtggccctacagcaaaattggccgctgg
atggtacatcccaaacctaagaatattcctacagcttccatcccccaagtcatcagacat
gtggccacatttgcccaagagcctgaacaacaaagaacctaa

>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_4|178_aa
MENGAVYSPTTEEDPGPARGPRSGLAAYFFMGRLPLLRRVLKGLQLYCNRASLPDYPGTF
LANVTGNLLIAQSKLLSLLAFICEEVVSQCTLCGGLYFFEFVSCSAFLLSLLILIVYCTP
FYERVDTTKVKSSVFGFIASFMFLLDFITMLYEKRQESQLRKPENTTRAEALTEPLNA

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_4|537_bp
atggagaacggagcggtgtacagccccactacggaggaggacccgggccccgccagaggc
ccccggagcggcctcgctgcctactttttcatgggccggctcccattgctccggcgcgtt
ctcaagggcttgcagctgtattgtaatcgagcttctctccctgactaccctggaactttt
cttgctaatgtcactggcaaccttcttatagctcagtctaagttgctgtctctgctggcc
ttcatctgtgaagaagttgtatcacaatgtactttatgtggaggactttatttttttgag
tttgtaagctgcagtgcctttcttctgagtctccttatactgattgtgtattgcactcca
ttttatgagagagttgataccacaaaagtaaaatcatcggtgtttggatttatagcaagt
tttatgttcctacttgactttatcactatgctgtatgaaaaacgacaggagtcccagctg
agaaaacctgaaaataccactagggctgaagccctcactgagccacttaatgcctaa

>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_5|125_aa
MASAKKGGQKKKGRSAINEVVTQEYTINIHKRTHGVRFKKCAPWALKEIRKFAMKEMVAP
DMCVATRLNKAVWAKGIRNVSYRIRVRLSRIRMKIHQISSILWLPMYRLPLSKIYRQSMW
MRTNC

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_5|378_bp
atggcttccgcaaagaagggtggccaaaagaaaaagggccgttctgctatcaacgaggtg
gtgacccaagaatacaccatcaacattcacaagcgcacccatggagtgcgcttcaagaag
tgtgccccttgggcactcaaagagattcggaaatttgccatgaaggagatggtagctcca
gacatgtgcgttgctaccaggctcaacaaagctgtctgggccaaaggaataaggaatgtc
tcataccgaatccgtgtgcgattatccagaataaggatgaagattcaccaaataagctct
atactttggttacctatgtaccggttaccactttcaaaaatctacagacagtcaatgtgg
atgagaactaattgctga

>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_6|394_aa
MAAVGRVGSFGSSPPGLSSTYTGGPLGNEIASGNGGAAAGDDEDGQNLWSCILSEVSTRS
RSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVW
ILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPP
EEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPV
LVVCTKFVHEKEIMAEDDQVFLMKLQDASPRVPGGSPRTPNRSVSSNVASVSPIPAGSKK
IDPNMKAGATSEGVLANFFNSLLSKKTGSPGGPGVSGGSPAGGAGGGSSGLPPSTKKSGQ
KPVLDVHAELDRITRKPVTVSPTTPTSPTEGEAS

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_6|1185_bp
atggcggccgtggggcgagtcggctccttcggttcttctccgccgggattatcctcgact
tacactggcggccccttgggcaacgagatagcgtcgggcaacggtggcgccgcggcaggc
gacgacgaggacgggcagaacctttggtcctgcatcctcagcgaggtctccacccgctcg
cgctccaagctccctgcggggaagaacgtgctactgctgggtgaagatggagctggaaaa
acaagcttaataagaaaaattcagggaatagaggagtataagaaaggaagaggattggaa
tatttgtacttaaatgtgcatgatgaagacagggatgatcaaacaagatgtaatgtttgg
atcttagatggagacctatatcacaaaggcctccttaaattttcactggatgccgtatct
ctgaaggatactctagttatgctggttgttgacatgtcaaagccttggactgctttggat
tctttacagaaatgggcaagtgttgttagagaacatgttgacaaactgaaaatccctcct
gaagaaatgaaacaaatggaacaaaagttgattagagacttccaagaatatgtagagcca
ggagaagacttcccggcttctccccagagaagaaatactgcgtcacaagaagacaaagat
gacagtgtagttttacctctgggtgcggatacacttacacataacttgggcattccagta
ctagtagtttgcacaaagtttgtacatgagaaggaaattatggcagaagatgatcaggtg
tttcttatgaagctacaggatgcctcaccaagagtcccaggaggctccccacgaacacca
aatagatctgtatcatctaatgttgccagcgtgtcacccattcctgctgggtcaaaaaaa
attgatccaaacatgaaagctggagctacaagtgaaggcgttctggcaaatttcttcaac
agtttgttgagtaaaaagactggctctccaggaggccctggtgtgagtggtggtagccct
gcaggtggggctggaggtggaagcagtggtttaccaccatccaccaaaaagtcaggccag
aagcctgtcttagatgttcatgcagaactagacagaattacacgaaaaccagttacagtt
tctcccacaacacctacatctcctacggaaggagaagcttcttga

>gi568815595r:32383963_32602745|GENSCAN_predicted_peptide_7|235_aa
MAVNLHYLDDTECLHLMFVVRVMAYTVHAPQSDEDLYSGPHRAVSHLSRTLSSSLLQAAA
AASRPDWKTDTRCGRSCREKPTVEMEAYTGVSEGRTGRVCMQVPRLFFSTLKPAERGELK
DADEGREPALLSNRPEVPSKKADSSTASIALSKSLLWRILNYIMTQKIEWLDSWLPRQKG
GYALLVLRSLKGYLLHQLTTHKINYLFLHLEEPRGLVDCLGAKINLQEKQSTGSD

>gi568815595r:32383963_32602745|GENSCAN_predicted_CDS_7|708_bp
atggcagttaatttgcattatttagatgatacagaatgtttgcatttaatgtttgtggta
agggtaatggcttatacagtccatgctccacaatcagatgaagacctttattctggtcct
catcgtgcagtaagccacttaagcagaacactttcttcatctctgctccaagcagcagcg
gctgcatccaggcctgactggaagacggacacacgttgtggaagatcttgtagggaaaag
ccaacggttgagatggaggcttataccggtgtgagcgagggtagaacaggaagagtatgt
atgcaagtgccaagactgttcttctcaacgctgaagcctgcggagaggggcgagctgaag
gatgcagatgaaggccgggaacctgcactgctgagcaatcgacccgaagtaccttccaaa
aaagcagattcatccacagcttctatcgcattatccaaatctctcctctggaggatatta
aattacatcatgacacagaagatagaatggctagacagctggcttccccgccagaaggga
ggatatgctcttctagttctcaggagcctgaaagggtacctccttcatcagctgactaca
cataagataaactatctcttcctacacttggaagaaccacgaggtttggtggactgcctt
ggagcaaaaataaaccttcaggagaaacagtccactgggtcagactga