GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:54:53

Sequence gi568815595f:23707270_23990603 : 283334 bp : 42.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3113   3306  194  2  2   58   -8   155 0.424   1.11
 1.02 Intr +   3338   3561  224  0  2   15   44   224 0.535   7.62
 1.03 Intr +  32754  32811   58  2  1   88   54    64 0.016   0.54
 1.04 Intr +  35216  35389  174  0  0   75   66    68 0.122   2.29
 1.05 Intr +  55824  55978  155  1  2   81  105    14 0.177   1.27
 1.06 Term +  56170  56277  108  0  0   79   42   138 0.562   5.83
 1.07 PlyA +  56280  56285    6                               1.05

 2.00 Prom +  61314  61353   40                              -3.65
 2.01 Init +  76079  76109   31  1  1   78  115    19 0.168   3.55
 2.02 Intr +  82883  82909   27  0  0   87   86    42 0.063   1.07
 2.03 Intr +  98734  98819   86  2  2  100   80    60 0.881   5.02
 2.04 Intr +  99968 100152  185  1  2  116   69   252 0.946  23.76
 2.05 Intr + 104191 104241   51  1  0   86  109    55 0.185   4.50
 2.06 Intr + 108225 108423  199  0  1  106   31    36 0.109  -1.87
 2.07 Intr + 112422 112552  131  2  2   60   31   125 0.393   2.57
 2.08 Intr + 114715 114842  128  1  2   82   73    94 0.359   6.70
 2.09 Intr + 134815 134884   70  2  1   60  110    30 0.006  -0.28
 2.10 Term + 152849 152972  124  2  1   19   46   135 0.017  -0.72
 2.11 PlyA + 153502 153507    6                               1.05

 3.00 Prom + 154302 154341   40                              -3.05
 3.01 Init + 154350 154624  275  2  2   43   72   193 0.422   9.69
 3.02 Intr + 165861 165936   76  0  1   64  115    49 0.147   3.80
 3.03 Intr + 171376 171542  167  0  2   26  101   103 0.397   3.24
 3.04 Intr + 172343 172429   87  2  0   93   94    48 0.381   4.07
 3.05 Intr + 180298 180430  133  1  1   53  116   121 0.748  11.13
 3.06 Intr + 186897 187126  230  2  2    8   72   154 0.286   1.54
 3.07 Term + 187569 187767  199  0  1   53   41   128 0.681   0.49
 3.08 PlyA + 189052 189057    6                               1.05

 4.04 PlyA - 190547 190542    6                               1.05
 4.03 Term - 193780 193500  281  2  2   36   37   265 0.767  10.82
 4.02 Intr - 195704 195617   88  2  1   47   36   122 0.512   1.52
 4.01 Init - 200410 200348   63  1  0   69   81    72 0.610   5.80
 4.00 Prom - 207058 207019   40                              -7.15

 5.00 Prom + 209033 209072   40                              -7.45
 5.01 Init + 210591 210762  172  2  1   99  102   209 0.995  23.05
 5.02 Intr + 211171 211307  137  2  2   91   84   171 0.999  16.37
 5.03 Term + 211927 212232  306  0  0   91   34   206 0.998   9.63
 5.04 PlyA + 212262 212267    6                               1.05

 6.03 PlyA - 212608 212603    6                               1.05
 6.02 Term - 219263 219115  149  0  2   64   43   206 0.978  10.78
 6.01 Init - 220285 220219   67  1  1   65   44    26 0.304  -2.81
 6.00 Prom - 223288 223249   40                              -7.55

 7.00 Prom + 225686 225725   40                              -6.65
 7.01 Init + 229692 229817  126  2  0   63   97   132 0.847  11.81
 7.02 Intr + 238936 239213  278  0  2    4   -9   269 0.007   4.19
 7.03 Intr + 247329 247534  206  0  2   88  108    95 0.410   9.42
 7.04 Intr + 248768 248856   89  0  2   96   98    49 0.973   5.47
 7.05 Intr + 252402 252546  145  2  1   82   80    77 0.990   5.23
 7.06 Intr + 254708 255336  629  0  2   50   40   468 0.758  29.20
 7.07 Intr + 257708 257893  186  1  0   48   92    75 0.650   2.86
 7.08 Intr + 260544 260754  211  2  1  113  115   210 0.998  23.76
 7.09 Term + 269954 270150  197  0  2   60   48   114 0.804   1.19
 7.10 PlyA + 270257 270262    6                               1.05

 8.04 PlyA - 271161 271156    6                               1.05
 8.03 Term - 274474 274083  392  2  2   30   37   282 0.873  11.46
 8.02 Intr - 275138 274819  320  1  2   85   97   177 0.632  12.98
 8.01 Init - 281798 281725   74  2  2  115   99    27 0.944   7.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 210122 209901  222  2  0   71   45   314 0.993  21.33
S.002 Init - 210269 210246   24  2  0   67   79    33 0.811  -0.11
S.003 Term - 244549 244328  222  1  0   60   37   157 0.940   3.73
S.004 Init - 244924 244697  228  1  0   88   63   111 0.918   7.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_1|304_aa
XQTRAVLVTLLECKFSEVRDLPYSPLSLVPKQYLAHSNTSVRICGINKRITKQLDENGDI
TEESRQRPSSSAFIICNTSQCRMNPVNALTPKTGRLLPALLTDVYIPVSIVTEMPQKPAA
GLHPKLNTHKCLETWGDQGQKYSQSNEEIFIEEELYGLGGGKEKQQQPLYTNMPAQLGSL
VFGCRSRTNFQVAFRENPGKQFQSGNLLSLNISKTHLEDEIVKLALKTLFSLSSIQRDNC
GRKELSCLPDPAHSFFSGQLLLCRGSWEELFLAHAANRAQQARGGANMSPSSSPSAKVHL
KHEK

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_1|915_bp
nngcaaaccagggcagttctggtcaccctactcgagtgtaagttctctgaggtcagagat
ttgccttattcacctctgtctctggtccctaaacagtacctagcacatagtaacacctcg
gtacgtatttgtggaataaataagcgaataactaagcagctggatgaaaatggagacata
actgaggagtctcgccaaagacctagtagttctgctttcatcatttgcaacacatcacaa
tgccgaatgaatcccgtcaatgctttaactcctaagactggccgcctgcttcctgcccta
ctcactgatgtttatattcctgtctccatagttactgagatgcctcagaagccagcagct
gggttgcatcccaagctgaatacgcacaagtgtctggagacctggggtgatcaaggccag
aaatattcacaatctaatgaagaaatattcattgaggaagagctctatggcctgggagga
ggaaaagaaaaacaacaacaacctttgtatacaaatatgccagcccaacttggttctctt
gtatttggctgcagatcaagaacaaactttcaagtggcatttcgagagaatccaggaaag
cagtttcaatctggaaatttgctctccttaaatatttcaaaaacacatttagaagatgaa
attgtgaaattggccttgaaaactttattttcgctttcctcaattcaaagggacaattgt
ggaaggaaagaactgagctgcttgccagacccagcgcactcctttttctctggacagctg
ctgctttgcagagggtcgtgggaggagttatttttagcacacgcagccaacagagctcag
caggcccgtggaggcgctaacatgtcccccagttcatctccttctgcaaaggtgcatttg
aagcatgaaaaataa

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_2|343_aa
MRTGLKCKENVEEDEWRAEARERHEWPGPAAAAAAAAAAARRSQTQREGLFAGWGGGFAM
SDDDSRASTSSSSSSSSNQQTEKETNTPKKKESKVSMSKNSKLLSTSAKRIQKELADITL
DPPPNCRCSKLALCILPRSFCEFTLCFSGIPIPPRIGGNGNEMSVQKSQAAHHGSQWKEI
LFLQQWSVTYLVQKIVEIAGEIAVTFYSCPLLAVFLSWHPSSFGNFDLPAITEKLWTKER
HHEKSAQDEDSGIWHLEVYTRKSQQRRQKENQESVVLESSESKCGVTFGLTIMGSGISDV
RIRLKFRAQPFAASLLSQLSVLGFWVLSPWLDEDERSDPLRFL

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_2|1032_bp
atgaggacaggcctcaaatgtaaggaaaacgtggaggaggatgaatggagagcggaagcg
agagagagacacgagtggccaggcccagccgcagccgcagcagcagccgccgcggcggca
cggaggagccagacacaaagagaggggctgtttgcggggtggggtggggggttcgctatg
tcggatgacgattcgagggccagcaccagctcctcctcatcttcgtcttccaaccagcaa
accgagaaagaaacaaacacccccaagaagaaggagagtaaagtcagcatgagcaaaaac
tccaaactcctctccaccagcgccaagagaattcagaaggagctggcggacatcacttta
gaccctccacctaattgcagatgctccaagttagcactttgtatacttccacgtagtttc
tgtgaatttacattgtgtttttctggcattccaatacctcctcgaattggtggtaatggt
aatgagatgtcagttcagaagtcccaggctgctcatcatggttcacaatggaaagagatc
cttttcttgcaacagtggagtgttacatacctcgtccagaaaatagtggaaattgctggg
gaaattgctgtcacattttacagctgtccattgctggcagtctttctgagttggcaccca
agcagttttggcaattttgaccttcctgcaatcacagagaagctctggacaaaggaaagg
catcatgagaagagtgcccaggatgaagactcaggcatctggcatttagaagtgtacact
aggaaaagccagcaaaggagacagaaggaaaatcaagagagtgtggtattagaaagcagt
gaaagtaaatgtggtgtaacttttggtttgactataatgggcagtggaatctcagatgtt
aggatcagactgaaattcagagctcagccctttgctgccagcttgctctcacagctgtct
gtccttggtttctgggtgctttcaccttggctagatgaagatgaacgttctgacccgctc
aggtttctgtag

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_3|388_aa
MPRETHWRRNTQVDGRREECTGVGAHWDASRPSTGGMTQSLAGAVGEELGHQAARLQGKT
ISLLAAPSAESCFHSIKPRTHSPSPHVILFFWLWPSHTWCRFRKISQYKCEKMGVKMAHA
NPIVNCSCEGSRLRAPYENLMPDDLLLSPITPTWDCLVAGKQARGLPTDSTLCVCPNIWG
GALIPVRGHQGGLGRGGGQGTSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEY
PFKPPKTLRVTEYSSQSSGRRRDPKPDFQIVPVKITQDDVTVDNGQQELSKASLRSSSEL
IRSWNHYCLPSCLYIELELPVLQPAPQLLLITELTHGQPALAVTLVIILSDFTGHVDAAS
SNLVSYSLTSPMVSSSLPQPFTTPVVIS

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_3|1167_bp
atgccgagagaaacacattggcgaaggaatacacaggtggatggacgtcgagaggaatgc
actggtgtaggagcacactgggatgccagcaggccatcgactggtggaatgacacaaagt
ttggctggggcagttggagaagagttgggccaccaagcggccagactccaggggaaaacc
atttcccttctggctgccccatctgctgagagctgcttccactcaataaaacctcgcact
cattctccaagcccacatgtgatcctattcttctggctgtggccctctcacacctggtgt
agattcaggaaaatctcacagtacaaatgtgagaaaatgggagtaaaaatggcacacgca
aaccctattgtgaactgctcatgtgagggatctaggttgcgtgctccttatgagaatcta
atgcctgatgatctgctactgtcacccatcacccccacatgggactgtctagttgcagga
aaacaagctcgggggctccccactgattctacattatgcgtctgtcctaacatctgggga
ggtgctctgatacctgtccgtgggcaccagggaggcctgggccgcggcggaggacagggc
accagtgctggtcccaaaggcgataacatctatgaatggagatcaaccattctagggcct
ccaggatccgtgtatgagggtggtgtattctttctcgatatcacttttacaccagaatat
cccttcaagcctccaaagacactgcgcgtgacagaatacagcagtcaaagctcggggagg
agaagagaccccaaaccagattttcagatagtgcccgtaaagattacacaagacgatgtg
acagtagacaatgggcagcaagaactgtcaaaggcctctctgaggagcagcagtgaactc
atcagatcttggaaccactactgtcttccttcctgtctgtacattgagcttgagctccct
gtgctccagccggccccccaactgctcctcatcacagagctgactcatggtcaacctgct
ctcgccgttactctggtcataattcttagtgatttcactggccacgtagatgctgcttcc
agtaacctggtctcttattctttgacttctccaatggtctcatcatccttacctcagcca
ttcaccactcccgtggtcatatcctag

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_4|143_aa
MVKRGSNGNYTFSATDSICTKILQIPLDGDKELAASVLGAERESRRTSTFRMEDCETMED
VYMASVETDRGVKEQLHLYDTRGLQEGVELPKHYFSFADGFVLVYSVNNLESFQRVELLK
KEIDKFKDKKEASGYVKNAKCEL

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_4|432_bp
atggtgaagagaggatctaatggcaactatacgtttagtgccactgactcgatttgcact
aagattctccagattcccctggatggggataaagagctggctgccagtgttttgggagca
gaaagggaaagccggaggacttcaacattcagaatggaagattgcgaaacaatggaagat
gtatacatggcttcagtagaaacagaccgaggagtaaaagaacagttacatctttatgac
accagaggtctacaggaaggcgtggagctgccaaagcattatttttcatttgctgatggc
ttcgttcttgtgtacagtgtgaataaccttgaatcctttcaaagagtggagcttctgaag
aaagaaatcgataagttcaaagacaaaaaagaggcaagtggatatgttaaaaatgccaaa
tgtgaattataa

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_5|204_aa
MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV
IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW
VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF
HHTIGGSRRAAWRRRNTLQLHRYR

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_5|615_bp
atgggtgcatacaagtacatccaggagctatggagaaagaagcagtctgatgtcatgcgc
tttcttctgagggtccgctgctggcagtaccgccagctctctgctctccacagggctccc
cgccccacccggcctgataaagcgcgccgactgggctacaaggccaagcaaggttacgtt
atatataggattcgtgttcgccgtggtggccgaaaacgcccagttcctaagggtgcaact
tacggcaagcctgtccatcatggtgttaaccagctaaagtttgctcgaagccttcagtcc
gttgcagaggagcgagctggacgccactgtggggctctgagagtcctgaattcttactgg
gttggtgaagattccacatacaaattttttgaggttatcctcattgatccattccataaa
gctatcagaagaaatcctgacacccagtggatcaccaaaccagtccacaagcacagggag
atgcgtgggctgacatctgcaggccgaaagagccgtggccttggaaagggccacaagttc
caccacactattggtggctctcgccgggcagcttggagaaggcgcaatactctccagctc
caccgttaccgctaa

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_6|71_aa
MPIKSNAFISFGGVSCRLPGFQKNDTKKKKRKKRKRKEKERKRKKRKKREEEDEEQEEEE
EGGGGRRKKKK

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_6|216_bp
atgccaattaaatcaaatgctttcatcagttttggaggagtgagttgccgtttgccagga
tttcagaagaatgacacaaaaaaaaagaagaggaagaagaggaagaggaaagagaaggag
agaaagaggaagaagagaaaaaagagagaagaggaggacgaggagcaagaggaggaggag
gaaggaggaggaggaagaagaaagaagaagaaataa

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_7|688_aa
MRCTWRIHQWRRAPDKLKLSEELIVEKGPTWVSKSPLSIGDKRALTPQCTGRRTLFSRGD
PKARTPRKPNEPAPGEAGSCIPCRFRGGSAGRGRAAGRRRRLGEGVGLSRRDTLEGALRC
FDPERLPADWVAPPLEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDLANIEGILKNDR
IDCSMKTSKSSAPGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSI
QQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLIEM
QSAMKTMMNSQFSGHLQNDTLVEHHEQTALPAQEQLRPKPQLEQENIKSSSPPSSDFAKE
EVIGMVTRAHKDTFMYNQEQQENSAESMQPQRGERIPKNMEQYNLNHDHCGNGLSSHFPC
SESQQHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPIDGFSQNENKNS
YLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQ
HDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAGDLLNSMFEFSE
KLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLIMKNHPNEASIF
TKLLLKLPDLRSLNNMHSEELLAFKVHP

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_7|2067_bp
atgcgctgcacttggagaattcaccagtggaggagagctcctgataaactgaagctgagt
gaagagttgattgttgaaaagggacccacctgggtctctaagtctcctctaagtattggc
gacaagcgggcgctgacaccgcagtgcaccggacgccgcacgctcttttcgcgaggtgac
cccaaggcgcggaccccgcgcaaaccaaacgaaccggcgcctggggaggctggtagctgc
ataccttgcagattccgaggaggaagtgcaggacgagggcgtgctgcaggccggaggagg
cgcctcggggaaggcgtggggctttcccgaagggatacgctcgaaggagctctgaggtgc
ttcgatcccgagcgactccccgcagactgggtagcaccgccccttgagggttctgagaat
agtttccagtcctcctcctcttctgttccatcttctccaaatagctctaattctgatacc
aatggtaatcccaagaatggtgatctcgccaatattgaaggcatcttgaagaatgatcga
atagattgttctatgaaaacaagcaaatcgagtgcacctgggatgacaaaaagtcatagt
ggtgtgacaaaatttagtggcatggttctactgtgtaaagtctgtggggatgtggcgtca
ggattccactatggagttcatgcttgcgaaggctgtaagggtttctttcggagaagtatt
caacaaaacatccagtacaagaagtgcctgaagaatgaaaactgttctataatgagaatg
aataggaacagatgtcagcaatgtcgcttcaaaaagtgtctgtctgttggaatgtcaaga
gatgctgttcggtttggtcgtattcctaagcgtgaaaaacagaggatgctaattgaaatg
caaagtgcaatgaagaccatgatgaacagccagttcagtggtcacttgcaaaatgacaca
ttagtagaacatcatgaacagacagccttgccagcccaggaacagctgcgacccaagccc
caactggagcaagaaaacatcaaaagctcttctcctccatcttctgattttgcaaaggaa
gaagtgattggcatggtgaccagagctcacaaggatacctttatgtataatcaagagcag
caagaaaactcagctgagagcatgcagccccagagaggagaacggattcccaagaacatg
gagcaatataatttaaatcatgatcattgcggcaatgggcttagcagccattttccctgt
agtgagagccagcagcatctcaatggacagttcaaagggaggaatataatgcattaccca
aatggtcatgccatttgtattgcaaatggacattgtatgaacttctccaatgcttatact
caaagagtatgtgatagagttccgatagatggattttctcagaatgagaacaagaatagt
tacctgtgcaacactggaggaagaatgcatctggtttgtccaatgagtaagtctccatat
gtggatcctcataaatcaggacatgaaatctgggaagaattttcgatgagcttcactcca
gcagtgaaagaagtggtggaatttgcaaagcgtattcctgggttcagagatctctctcag
catgaccaggtcaaccttttaaaggctgggacttttgaggttttaatggtacggttcgca
tcattatttgatgcaaaggaacgtactgtcacctttttaagtggaaagaaatatagtgtg
gatgatttacactcaatgggagcaggggatctgctaaactctatgtttgaatttagtgag
aagctaaatgccctccaacttagtgatgaagagatgagtttgtttacagctgttgtcctg
gtatctgcagatcgatctggaatagaaaacgtcaactctgtggaggctttgcaggaaact
ctcattcgtgcactaaggaccttaataatgaaaaaccatccaaatgaggcctctattttt
acaaaactgcttctaaagttgccagatcttcgatctttaaacaacatgcactctgaggag
ctcttggcctttaaagttcacccttaa

>gi568815595f:23707270_23990603|GENSCAN_predicted_peptide_8|261_aa
MANLKLPMRSQLAHKIPETLAFMSWLRSACSPCYWHSLRPWSKVGAKSWGHEQQQETDGF
LGRRRRVPSEAPPSGYRGPECWQLSRQPCRPEWKLVVPFPGPPMAARGPISMHFLLSEAH
KIPRLSQSWGKAPLHLTLHSSVYLILPGCRTRTWDPLNGKAKSCNTNRIETCPLLTTLWV
KERKAAASPSGTSHLGTPQAKAVIPSLEPCGSWHLQPSGHHCIPRCQLGKLLMVHLVQLQ
PRREPAPGDVYPMAAADVSAQ

>gi568815595f:23707270_23990603|GENSCAN_predicted_CDS_8|786_bp
atggccaatctcaagctaccaatgcgaagtcaactggctcacaaaattcctgaaacattg
gctttcatgagctggctcagaagtgcctgttccccctgctattggcactcactccgacct
tggagcaaagttggggccaagtcctggggtcatgaacagcagcaagagacagacgggttc
ctgggcagaaggaggcgggtccccagtgaggccccaccttcaggctacagagggcctgaa
tgctggcaactgagccgccagccctgcagaccagagtggaaacttgtggtgccttttcca
ggcccacccatggctgcccgtggaccaatcagcatgcacttcctcctctccgaggcccat
aaaatccctaggctgagtcagagctggggaaaagctcctcttcatcttaccctccactca
tctgtgtacctcattcttcctggttgcaggacaagaacttgggacccactgaatggcaaa
gctaaaagttgtaacacaaataggattgaaacatgccccttgctcaccacgctgtgggtg
aaggagagaaaagctgcagccagcccttcagggacgtcacacctgggaacgccccaagcc
aaggctgtgattccctctttggagccctgtggttcctggcatcttcagccttccggccac
cactgcattcccaggtgccagctgggaaagctgctcatggtgcacctggtccagctgcag
cctcgcagagagcctgcacctggagatgtctatcccatggcagcagctgatgtgtctgca
cagtag