GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:59:21

Sequence gi568815596f:230660002_230918701 : 258700 bp : 45.28% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   3144   3139    6                               1.05
 1.07 Term -   8614   8444  171  1  0  114   39   129 0.848   8.43
 1.06 Intr -  30460  30396   65  2  2   -1   83   100 0.008  -0.96
 1.05 Intr -  34687  34550  138  2  0   75   80    80 0.633   6.34
 1.04 Intr -  41053  40907  147  2  0   52   47    75 0.350   0.01
 1.03 Intr -  42948  42620  329  2  2   53   38   222 0.926   9.04
 1.02 Intr -  44475  44024  452  0  2   48  113    91 0.332  -0.30
 1.01 Init -  47271  47140  132  0  0   47   41   116 0.538   2.94
 1.00 Prom -  50964  50925   40                              -5.76

 2.02 PlyA -  52090  52085    6                               1.05
 2.01 Sngl -  53325  52567  759  0  0   78   31   225 0.743  10.03
 2.00 Prom -  63060  63021   40                              -5.06

 3.02 PlyA -  63861  63856    6                               1.05
 3.01 Sngl -  65402  65142  261  2  0   70   44   339 0.888  22.86
 3.00 Prom -  70943  70904   40                              -3.46

 4.05 PlyA -  70966  70961    6                               1.05
 4.04 Term -  75102  74643  460  2  1   22   41   196 0.466   2.86
 4.03 Intr -  80826  80754   73  1  1   58   72    66 0.509   0.46
 4.02 Intr -  87432  87307  126  1  0   73   43   114 0.658   6.05
 4.01 Init -  95130  95076   55  0  1   63   12    58 0.126  -2.85
 4.00 Prom -  95436  95397   40                              -1.36

 5.00 Prom +  98538  98577   40                              -6.46
 5.01 Init + 100001 100114  114  1  0  103   86    89 0.982  10.41
 5.02 Intr + 102406 102501   96  0  0   59   65    70 0.308   2.01
 5.03 Intr + 130871 131035  165  1  0   68   94   132 0.793  11.96
 5.04 Intr + 136538 136602   65  1  2   73   65    34 0.109  -2.88
 5.05 Intr + 138728 138896  169  2  1  104   87    45 0.206   5.95
 5.06 Intr + 150262 150321   60  0  0  102   89    22 0.226   2.63
 5.07 Intr + 154048 154113   66  0  0  106   86    30 0.271   3.70
 5.08 Intr + 157753 157896  144  0  0   45   75   105 0.298   5.38
 5.09 Term + 158515 158703  189  0  0  132   33   240 0.998  20.35
 5.10 PlyA + 158709 158714    6                               1.05

 6.00 Prom + 159401 159440   40                              -8.06
 6.01 Init + 162098 162148   51  1  0   89   90    74 0.953   8.86
 6.02 Intr + 167898 168021  124  2  1   79   66    52 0.818   2.26
 6.03 Intr + 168928 169064  137  2  2   70   64    66 0.227   2.69
 6.04 Term + 184638 184799  162  2  0   58   33   133 0.307   2.74
 6.05 PlyA + 188695 188700    6                               1.05

 7.00 Prom + 198502 198541   40                              -5.16
 7.01 Init + 205025 205144  120  1  0  106   76   213 0.994  22.09
 7.02 Intr + 213416 213556  141  1  0   96   94   226 0.974  24.55
 7.03 Intr + 215517 215540   24  2  0  129   65     5 0.581   0.52
 7.04 Intr + 215619 215807  189  2  0   84   76   440 0.996  42.18
 7.05 Intr + 216856 216966  111  0  0   94   91   193 0.999  20.78
 7.06 Intr + 217399 217549  151  0  1   92   69   305 0.999  28.74
 7.07 Term + 218007 218098   92  1  2  104   54   225 0.918  18.58
 7.08 PlyA + 219226 219231    6                               1.05

 8.04 PlyA - 219971 219966    6                               1.05
 8.03 Term - 230183 230043  141  2  0   49   43    89 0.313  -1.57
 8.02 Intr - 234535 234108  428  2  2  106   77   111 0.513   5.31
 8.01 Init - 236145 235998  148  0  1   84   82    86 0.834   7.85
 8.00 Prom - 237738 237699   40                              -2.66

 9.02 PlyA - 237811 237806    6                               1.05
 9.01 Sngl - 250961 250002  960  2  0   76   43  1314 0.988 122.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_1|477_aa
MSARLKSIPTKPSRYAEKEAYRGCGAGLREKSAEETSCSPGSEEKHQTEQLTPQKSTFLR
TKNQVRDYSTWFKLHITERGTEEGRKDSLELLMFPIPPSPGSNHGARRESVVLGEGEHSD
CRILHFQLWWLWGENHLLEERSGKSKGDFGNLGISSASGEQSTKQAFRVPDSRPWLLDGI
SGPALDQRGVYCPERNQKISTSIKTVQENSSSNKLNKTSGTSPGETEIWELSDRQFKIAI
LKKLNKIQDNTEKEFRILSDKFNKEIEIIKKNQAEILELKNTTDMLKNTSESPTSRIDQA
EERINVHILIPGTCEYVTLGGKGNFVEVIKILEVGKLSRILWWAQCNQNGVYKLPATNSH
KGSQHFAPDCPAGVTTICAEPLCSPPVAHPSDSRPFNISAILGPMQKIATVSEEQYITVH
KICKAWQCGTAQASKPETQHGKPHQGKEAWMGNFLDTGEEQPESLILTHFTLFHLPF

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_1|1434_bp
atgtcagcacgtttaaagtccatcccaaccaagcccagccgttacgccgagaaggaggcc
tacaggggctgtggggctggactcagagagaaatcagctgaggaaacatcctgcagccct
ggaagtgaggagaaacaccaaactgagcaactaaccccacaaaaaagcaccttcctgaga
accaaaaatcaagtgagagattatagcacctggtttaaacttcatatcactgaaagaggc
actgaagagggtaggaaagatagtcttgaattgctgatgttccctattcccccatcccct
ggcagcaaccatggggcacgaagagaatctgtggtcttgggtgagggagagcacagtgat
tgcaggattttgcatttccagctgtggtggctatggggagagaaccatctgcttgaggaa
aggagtgggaagagtaaaggggactttggcaacttaggtatcagctcagcctcaggggag
cagagcaccaaacaggcttttagagtccctgattctaggccgtggctcttggatggcatt
tctggacctgccctggaccagaggggagtctactgccctgaaagaaaccagaaaatatcc
acaagcatcaagaccgtccaggaaaacagctcgtcaaacaaactaaataagacatcaggg
accagtcctggagagacagagatatgggaactttcagacagacaattcaaaatagctatt
ttgaagaaactcaataaaattcaagataacacagagaaggaattcagaatactatcagat
aaatttaacaaagagattgaaatcattaaaaagaatcaagcagaaattctggagttgaaa
aacacaactgacatgctgaagaatacatcagagtctcctaccagcagaattgatcaagca
gaagaaagaattaatgtccacatcctaatccctggaacctgtgaatacgtgaccttaggt
ggtaaagggaactttgtagaagtgattaagatccttgaagtggggaaattatccaggatc
ctctggtgggctcagtgtaatcagaacggtgtttataagctgccagcgacgaactctcat
aagggcagccagcacttcgcccctgactgtcctgctggagtgacaaccatctgtgctgag
cctctttgcagtcctcctgtggctcatccctcggacagccgccctttcaacatctcagct
attttaggaccaatgcagaagattgccacggtgtctgaggaacagtacatcacagtacat
aagatctgcaaagcctggcagtgtggcactgcccaggccagcaaaccagagacacagcac
ggcaagccccaccaggggaaagaggcttggatgggcaacttcctggacactggggaggag
caaccagaaagcctcatcctcacccactttaccctgttccaccttcctttctga

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_2|252_aa
MEAAPGPVRAQRGRRKPGRRPHHEQGRPGVTHGAGPGVPFSASASSLSPSSAAAASGCSF
GPRGVARTLGPSVVFRPLLLPATGSRGGGGCAGGRLPRGSRGCRRAAALAWAAAAAVGPG
AALVFACAPAPAPEGSVSPRPRRSPNPSPRLRPEPGFDVRTAQPPRTRRRAVPQRPLPPR
APPSGRRTQGAASRREARAGGAAEKSRSQAPQFLFLRRSFQGGAQPFLLRLSALTAGIAR
PLSTTTSSTLQA

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_2|759_bp
atggaggcagccccggggccggtgagggcccagcggggcaggcggaagccgggcaggcgt
ccgcaccacgagcagggccggccgggggtcactcacggggctgggccgggcgttcccttc
tctgcctccgcgtcgtcgctgtccccgtcctcggccgccgccgcttcgggctgctcgttc
ggtccccgcggagtggctcggacgctcggcccctccgttgtcttccgcccgctcctgctc
ccggcgacgggctcccgcggcggcggcggctgcgcgggcggacggctgcccaggggctcc
cgcggctgccgccgcgctgctgcgctcgcttgggctgcggctgctgctgtggggcccggc
gccgccttagtcttcgcctgtgcccccgccccggcgcctgaaggctctgtgtctcccagg
ccgcgccgctccccgaacccctcgccccgcttgcggcccgagcccggctttgacgtgcgc
actgcgcagccgccgaggacgcgacgtcgggcggtgccgcaacgcccccttccgcctcgg
gcgcccccgagcggccggcggactcagggcgccgcaagtaggcgcgaggcccgagcggga
ggggccgcagagaaaagcagaagccaagccccgcagttcctcttcctccgccgcagcttc
caaggcggggctcagccctttctcctccgcctgagcgctcttactgcgggaatcgcacgc
ccactttcaacgaccacttcctcaactcttcaagcttaa

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_3|86_aa
MTTSQKHRDFVAEPMGEKPVGSLAGIGEVLGKKLEERGFDKAYVVLGQFLVLKKDEDLYR
EWLKDTCGASAKQSRDCLREWCDAFL

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_3|261_bp
atgacaacctcccaaaagcaccgagacttcgtggcagagcccatgggggagaagccagtg
gggagcctggctgggattggtgaagtcctgggcaagaagctggaggaaaggggctttgac
aaggcctacgttgtccttggccagtttctggtgctaaagaaagatgaagacctctaccgg
gaatggctgaaagacacttgtggcgccagcgccaagcagtcccgggactgccttcgagag
tggtgcgacgccttcttgtga

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_4|237_aa
MEPIQMPINQRVDKETVECKRKNIYRGNSSMGNAINKWFIVLLSPSLREIIFGNYSNANG
GVPSPRAVEWYGSSDLLVTEEVSSGKLRKTTRIQGVSGQATSKEHNVNEKQADEISQNAT
QSTSIGHLMLSYDSTENTTPPPPPNIGGLDQQTNNAEQCSTRVGHIFQFLPPQLRECKCS
DSFVGVECLWDPVGQLFRLPQAFMIPVAKSPKAGPTFKTNMRTKGQNNRNEDVVWVK

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_4|714_bp
atggaaccaatccaaatgcccatcaatcaacgagtggataaagaaactgttgagtgtaag
aggaagaatatctacagaggaaacagttccatgggcaatgccatcaacaagtggttcata
gtgctcctctccccttctctccgtgaaataatttttggaaactacagcaatgccaatggg
ggggtccccagcccccgggctgtggagtggtacgggtccagtgacctgctagtaacagag
gaggtgagcagtgggaaattaaggaaaacaacaagaattcaaggggtatcagggcaggcg
accagcaaagagcacaatgtaaatgaaaaacaagccgatgagataagccaaaatgctacc
caatcaacaagtattggtcacttgatgctttcctatgattcaacagaaaacacaacccca
ccaccgccaccaaatattggtggtttagaccagcagactaataatgcagaacagtgttcc
acccgggtggggcacatattccagttcctccctccacagttgagagaatgtaagtgcagt
gactccttcgtcggggtggaatgcctctgggatcctgtgggccagctctttagactccct
caggccttcatgatacctgtggccaaaagccctaaagcagggcctacatttaagactaac
atgaggactaaaggacaaaataacaggaatgaagatgtggtctgggtcaaataa

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_5|355_aa
MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKLDIFNFRKHSAVLIALQALHQV
EAANSQQRAEATEEVSKNLVAMKEILYGTNEKEPQTEAVAQLAQELYNSGLLSTLVADLQ
LIDFELSKDELYDQPFCEQIFPSSKSRYESPEIALNCGIMLRECIRHEPLAKIILWSEQF
YDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTK
RQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPN
KTQPILDILLKNQAKLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_5|1068_bp
atgccgttcccgtttgggaagtctcacaaatctccagcagacattgtgaagaatctgaag
gagagcatggctgttctggaaaagcaagacatttctgataaaaaagcagaaaagttggac
atcttcaactttaggaagcactcagcagtcctgatagccctacaggctttgcaccaggtg
gaggcagctaacagccagcaaagagcagaggctacagaagaagtttccaaaaatctggtt
gccatgaaagaaattctgtatggcacaaatgaaaaagagcctcagacagaagcagtagct
caacttgctcaagaactctataatagtgggctccttagcaccctggtagctgatttacag
ctcattgactttgagctcagcaaagatgaattgtatgatcagccattttgtgagcagata
tttccatcaagtaagagccggtatgaatctccagaaatagctctaaattgtggaataatg
ttaagagaatgcatcagacatgaaccacttgcaaaaatcattttgtggtcggaacagttt
tatgatttcttcagatatgtcgaaatgtcaacatttgacatagcttcagatgcatttgcc
acattcaaggatttacttacaagacataaattgctcagtgcagaatttttggaacagcat
tatgatagatttttcagtgaatatgagaagttacttcattcagaaaattatgtgacaaaa
agacagtcactgaagcttctcggtgaactactactagatagacacaacttcacaattatg
acaaaatacatcagtaaacctgagaacctcaaattaatgatgaacctgctgcgagacaaa
agtcgcaacatccagtttgaggcctttcacgtttttaaggtgtttgtagccaatcctaac
aagacgcagcccatcctagacatcctcctcaagaaccaggccaaactcatagagttcctc
agcaagtttcagaacgacaggacggaggatgagcagtttaacgacgagaagacctattta
gttaaacagatcagggatttgaagagaccagctcagcaagaagcttaa

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_6|157_aa
MAVSSLTIWFPEDMKDRNLQSTLLGPEEQCQGSRNPICSDQQSQDRRRGKRICHRPLTEP
VPAVSKACAGLEAVSHSEGLSLLPQGTVPDAGPRPGKWTLKSPQPASQPAIHSAIHVAIQ
TSINQGQFCKELPAMPRDRYSLVITIGGEEQDASGIQ

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_6|474_bp
atggctgtgtcctcactgaccatctggtttccagaagacatgaaggacaggaacctccag
agcacattgttggggcctgaggagcagtgccaagggtcccggaatcccatctgctctgat
caacagtcacaggaccgccgacgaggaaagaggatttgccaccgtcccctgacagagcct
gtccctgctgtgtcgaaggcctgtgcaggactcgaggccgtctcccactcagagggcctg
tccttgctgccccaagggactgtccctgacgcagggcctaggcctggaaagtggacactc
aagagtccccagccagccagccagccagccattcattcagccatccatgtggccatccaa
acatctatcaaccaggggcaattttgcaaggaacttccagcaatgcctagagatagatat
tctttggttatcacaattggtggtgaggagcaggatgcttctggcatccagtag

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_7|275_aa
MVKISFQPAVAGIKGDKADKASASAPAPASATEILLTPAREEQPPQHRSKRGGSVGGVCY
LSMGMVVLLMGLVFASVYIYRYFFLAQAFGACSGRLARDNFFRCGVLYEDSLSSQVRTQM
ELEEDVKIYLDENYERINVPVPQFGGGDPADIIHDFQRGLTAYHDISLDKCYVIELNTTI
VLPPRNFWELLMNVKRGTYLPQTYIIQEEMVVTEHVSDKEALGSFIYHLCNGKDTYRLRR
RATRRRINKRGAKNCNAIRHFENTFVVETLICGVV

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_7|828_bp
atggtgaagattagcttccagcccgccgtggctggcatcaagggcgacaaggctgacaag
gcgtcggcgtcggcccctgcgccggcctcggccaccgagatcctgctgacgccggctagg
gaggagcagcccccacaacatcgatccaagagggggggctcagtgggcggcgtgtgctac
ctgtcgatgggcatggtcgtgctgctcatgggcctcgtgttcgcctctgtctacatctac
agatacttcttccttgcgcaggcttttggggcatgtagcggacggctggcccgagataac
ttcttccgctgtggtgtgctgtatgaggactccctgtcctcccaggtccggactcagatg
gagctggaagaggatgtgaaaatctacctcgacgagaactacgagcgcatcaacgtgcct
gtgccccagtttggcggcggtgaccctgcagacatcatccatgacttccagcggggtctg
actgcgtaccatgatatctccctggacaagtgctatgtcatcgaactcaacaccaccatt
gtgctgccccctcgcaacttctgggagctcctcatgaacgtgaagagggggacctacctg
ccgcagacgtacatcatccaggaggagatggtggtcacggagcatgtcagtgacaaggag
gccctggggtccttcatctaccacctgtgcaacgggaaagacacctaccggctccggcgc
cgggcaacgcggaggcggatcaacaagcgtggggccaagaactgcaatgccatccgccac
ttcgagaacaccttcgtggtggagacgctcatctgcggggtggtgtga

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_8|238_aa
MGSDKTESPLSSSRTPGVHTSNQGFLVFAQRDYQVARNDQTGAVIGWREGCSLGELNNVM
HKRNSLNSLENCDTTFCAETEVEVVGGVFTAPSLGARGVGCLHLPCTQDPKERGTVCETG
ERSPPEPGHLISQALGCPSGATKTLRLGTSHRNAVLSILFAPILVNVSFITSSNNKKTKS
EAIQLEAFLGLEPQVFLYSNTHRLRQLVTSPAPTPDAKPSRYCPKLGGAEEPSEGEEK

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_8|717_bp
atggggtcagataaaactgagtcaccactgtcctcctcaagaacacctggtgtccacacc
tctaaccagggcttcctggtgtttgcacaaagagattatcaggtggccaggaacgatcag
actggagcagtcattgggtggagggaaggctgcagcctgggtgagctgaacaatgtcatg
cacaaaagaaattctcttaacagtttggaaaactgtgacaccaccttctgtgcagaaacg
gaagtggaagtggtggggggtgtcttcacggctcccagcctcggggcacgtggtgtgggg
tgtttgcacctgccgtgcacccaagaccccaaggagcgggggaccgtgtgtgaaactggt
gaacgcagccctcctgagccagggcatctaatttcccaggctcttggctgcccaagtggg
gctactaaaaccctgagacttggcaccagtcaccgaaatgctgttctttccattctgttt
gccccaattctggtaaatgtgagttttattaccagcagcaacaacaagaagacaaagtca
gaagcgatccaactggaagccttcctgggtttggagcctcaggtgttcctttacagcaac
acacaccgactaagacaactagtgacctctcctgctccgacgcccgacgccaagccctca
cgctactgtcccaaacttggaggcgccgaggagcctagtgaaggggaggaaaagtag

>gi568815596f:230660002_230918701|GENSCAN_predicted_peptide_9|319_aa
MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
VFFPLEVFGFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
AHRPSRVQLVLQDTTISRG

>gi568815596f:230660002_230918701|GENSCAN_predicted_CDS_9|960_bp
atgagtcagcaaaacaccagtggggactgcctgtttgacggtgtcaacgagctgatgaaa
accctacagtttgcagtccacatccccaccttcgtcctgggcctgctcctcaacctgctg
gccatccatggcttcagcaccttccttaagaacaggtggcccgattatgctgccacctcc
atctacatgatcaacctggcagtctttgacctgctgctggtgctctccctcccattcaag
atggtcctgtcccaggtacagtcccccttcccgtccctgtgcaccctggtggagtgcctt
tacttcgtcagcatgtacggaagcgtcttcaccatctgcttcatcagcatggaccggttc
ttggccatccgttacccgctactggtgagccacctccggtcccccaggaagatctttggg
atctgctgcaccatctgggtcctggtgtggaccggaagcatccctatctacagtttccat
gggaaagtggaaaaatacatgtgcttccacaacatgtctgatgatacctggagcgccaag
gtcttcttcccgctggaggtgtttggcttcctccttcccatgggcatcatgggcttctgc
tgctccaggagcatccacatcctgctgggccgccgagaccacacccaggactgggtgcag
cagaaagcctgcatctacagcatcgcagccagcctggctgtcttcgtggtctccttcctc
ccagtccacctggggttcttcctgcagttcctggtgagaaacagctttatcgtagagtgc
agagccaagcagagcatcagcttcttcttgcaattgtccatgtgtttctccaacgtcaac
tgctgcctggatgttttctgctactactttgtcatcaaagaattccgcatgaacatcagg
gcccaccggccttccagggtccagctggtcctgcaggacaccacgatctcccggggctaa