GENSCAN 1.0	Date run: 19-Feb-121	Time: 20:41:38

Sequence gi568815596r:156225747_156430186 : 204440 bp : 39.19% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   4782   5216  435  2  0   64   38   299 0.619  18.52
 1.02 PlyA +   5338   5343    6                               1.05

 2.00 Prom +  28479  28518   40                              -1.05
 2.01 Init +  29678  29978  301  1  1   88   -8   339 0.938  21.76
 2.02 Term +  30024  30691  668  1  2  -61   43   389 0.938  12.50
 2.03 PlyA +  30919  30924    6                               1.05

 3.00 Prom +  31088  31127   40                              -6.15
 3.01 Sngl +  31181  32248 1068  1  0   44   42   411 0.892  28.98
 3.02 PlyA +  32384  32389    6                               1.05

 4.00 Prom +  32414  32453   40                             -13.78
 4.01 Init +  32536  34139 1604  0  2   42   53   404 0.701  24.20
 4.02 Intr +  70849  70967  119  1  2   82   18    81 0.000  -0.31
 4.03 Intr +  90860  90941   82  0  1   60  108    43 0.033   1.28
 4.04 Intr +  91697  91756   60  2  0   86   94    37 0.562   1.03
 4.05 Intr +  93702  93850  149  0  2   23   28   193 0.290   5.76
 4.06 Term +  96866  97116  251  0  2  -44   47   263 0.024   3.88
 4.07 PlyA +  98128  98133    6                               1.05

 5.07 PlyA -  98709  98704    6                               1.05
 5.06 Term - 100254  99998  257  1  2   78   47   147 0.996   4.36
 5.05 Intr - 100582 100404  179  0  2   96   82   113 0.946  10.14
 5.04 Intr - 101174 100972  203  2  2   13   90   212 0.524  11.06
 5.03 Intr - 102268 102105  164  2  2   44   90   131 0.731   7.67
 5.02 Intr - 102787 102658  130  1  1   85  102    86 0.991   9.05
 5.01 Init - 104440 103577  864  1  0   89  105   827 0.741  79.12
 5.00 Prom - 105985 105946   40                              -4.05

 6.06 PlyA - 107190 107185    6                              -0.45
 6.05 Term - 108744 108380  365  1  2   81   43   288 0.143  17.34
 6.04 Intr - 114052 114012   41  0  2   86   89    30 0.082  -0.15
 6.03 Intr - 115661 115567   95  2  2   56   87    89 0.043   3.44
 6.02 Intr - 124571 124417  155  0  2   67   43   178 0.357  10.07
 6.01 Init - 147259 147118  142  1  1   70   72   111 0.931   8.05
 6.00 Prom - 148214 148175   40                              -6.15

 7.02 PlyA - 148383 148378    6                               1.05
 7.01 Sngl - 149635 149297  339  1  0   88   37   363 0.811  26.98
 7.00 Prom - 151912 151873   40                              -3.35

 8.02 PlyA - 152066 152061    6                               1.05
 8.01 Sngl - 174814 174359  456  1  0   56   42   247 0.563  10.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  90877  90941   65  0  2   64  108    39 0.838   4.17
S.002 Init +  96812  96887   76  1  1   75   60    96 0.822   6.80
S.003 Term +  96995  97116  122  0  2   78   47   108 0.808   3.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_1|144_aa
MGNITGLFEDIPSTSSEPSSPTDWLDRTVNTITAVQLSGSPIPRGRGRAPHQGIATWNKK
IWTAALQSQIFPLKQSTQRGRNQKRKYDNVTKQDSITFTKDHTRAMNPNQEEISELPDKQ
FRRLIIKLFKEVPEKGENQLNTIF

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_1|435_bp
atgggtaacatcacaggactctttgaagacattcccagcaccagctcagagcccagtagc
cccactgactggctagacagaacggtgaacacaatcactgctgttcagctctcaggaagc
cccatccccaggggaagaggaagagcaccacatcaagggattgccacatggaacaaaaaa
atctggacagcagcccttcagtcccagatctttccactgaaacagtctacccaaagggga
aggaaccagaaacggaagtatgataatgtgacaaaacaagattctataacattcacaaaa
gatcacactagagcaatgaatccaaaccaagaagaaatctctgaattgccagataaacaa
ttcagaaggttgattattaagctattcaaggaggtaccagagaaaggtgaaaaccaactt
aatacaattttttaa

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_2|322_aa
MGKKQNRKTGNSKTQSTSPPPKERSSSPATEQSRMENDFDELREEGFRRSNYSELREDIQ
TKGKELENFEKNLEECITRITNTEKCLKELMELKTKARDLQRVSAMEDEMNEMKREGKFR
EKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQDIIQENFPYLARQANV
QIQEIQRTPQRYSSRRATPRHIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTVNVSAE
TLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTSRPALKEL
LKEALNMERNNRYQPLQNHAKM

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_2|969_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaacgcagagcacctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagccggatggagaatgactttgat
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaacttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagatcta
caaagggtatcagcaatggaagatgaaatgaatgaaatgaagcgagaagggaagtttaga
gaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaaaga
ccaaatctacgtctgattggtgtacctgaaagtgatggggagaatggaaccaagttggaa
aacactctgcaggatattatccaggagaacttcccctatctagcaaggcaggccaacgtt
cagattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactccaaga
cacattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagag
aaaggtcgggttaccctcaaagggaagcccatcagactaacagtgaatgtctcggcagaa
accctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaagaatttt
caacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaataaaatac
tttacagacaagcaaatgctgagagattttgtcaccagcaggcctgccctaaaagagctc
ctgaaggaagcgctaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgcc
aaaatgtaa

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_3|355_aa
MGDFNTPLSTLDRSTRQKVNKDTQDLNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELSIKNLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDTFKAVCRRKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSCFFERINRIDRPLARLIK
KKREKNQIDTIKNDRGDITTDPTEIQTTIIEYYKHLYANKLENLEEMDKFLDTYTLPRLN
QGEVESLNRPITGSEIVAIINSLSIKKSPGPDGFTAEFYQRYKEELVPFLLKLFQ

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_3|1068_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggacttgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagagatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcagcattaagaatctc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagacggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagccgaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatcc
aggagctgcttttttgaaaggatcaacagaattgatagaccactagcaagactaataaag
aaaaaaagagagaagaatcaaatagacacaataaaaaatgatagaggggatatcaccacc
gatcccacagaaatacaaactaccatcatagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaac
cagggagaagttgaatctctgaatagaccaataacaggatctgaaattgtggcaataatc
aatagtttatcaatcaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactattccaatga

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_4|754_aa
MIISIEAEKAFDKIQQPFMLKTLNKLGVDGTYLKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMILYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPI
TFFTELEKNTLKFIWNQKRARIAKSILSQKNKAGGIMLPDFKLYYKAVVTKTAWYWYQNR
DIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLT
PYTKINSRWIKDLNIRPKTIKTLEENLGVTIQDIGMGKDFMSKTPKAMATKAKIDKWDLI
KLKSFCTAKETTIRVNRKPTKWEKIFATHSSDKGLISRIYNELKQIYKKKTNNPIKKWAK
DMNRHLSKEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNSIYALF
RPSVLVFIEKKSKIKNMIGTYSQKSLPQEAPASLKRHFENMSQGFLVPKSLIMNYFRITA
DKSMLPSRSLNMPEATSSTLSSFQSQEIVVDSIPLEVPLVPDERLLTLAAAALYCTRDVS
SRNLGIVSARTEDAGIRGRYEALITKFNLFLKKVMQRLAFGNAACLLFFLTLLLETLGQE
KSSAASGKMQGQCMRRSSPEQLGARPAGSLTATL

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_4|2265_bp
atgattatctcaatagaggcagaaaaagcctttgacaaaattcaacaacccttcatgcta
aaaactctcaataaattaggtgttgatgggacgtatctcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaagagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattttatatctagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatagtgaaa
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatc
actttcttcacagaattggaaaaaaatactttaaagttcatatggaaccaaaaaagagcc
cgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactacaaggctgtggtaaccaaaacagcatggtactggtaccaaaacaga
gatattgatcaatggaacagaacagagccctcagaaataacgccacatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttacacaaaaatcaattcaagatggattaaagacttaaacattagacctaaaaccata
aaaaccctagaagaaaacctaggcgttaccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagaaaacctaca
aaatgggagaaaattttcgcaacccactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaag
gacatgaacagacacttgtcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcaatcattaaaaagtcaggaaacaacagcatttatgccttattt
cggccttctgtgcttgtgttcatagagaagaaaagcaaaataaagaatatgattggcact
tactcacagaaatcacttcctcaagaagcacctgctagcctaaaaagacactttgagaac
atgtcacaaggcttccttgtccctaaatcactgattatgaattatttccggataactgca
gacaagtcaatgctcccctccagaagtctgaacatgcctgaagcaacatcctcaactctc
agcagcttccagagccaagaaattgtggtagactcaatccctctggaagtccctctagta
cccgatgaaagacttctcacactcgcagcagccgccctctactgtaccagggacgtctct
agcagaaacttgggcattgtatctgctagaacggaggacgcgggaatacgagggcggtat
gaagccctcattacaaagtttaatctctttctgaagaaggtaatgcaacgtctggctttt
ggcaatgcagcgtgtctgctgtttttcctcactttactcctagaaacattaggacaagaa
aagtcctcagctgcatctggaaagatgcaggggcaatgcatgcgacgctcttcacccgag
caactcggtgcgcggccggccgggagtttgacagcgactctgtga

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_5|598_aa
MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSF
STFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSV
YYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQ
SPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHA
SQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCL
ANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSP
PVSLISALVRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGW
AEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFG
EWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVT
FNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_5|1797_bp
atgccttgtgttcaggcgcagtatgggtcctcgcctcaaggagccagccccgcttctcag
agctacagttaccactcttcgggagaatacagctccgatttcttaactccagagtttgtc
aagtttagcatggacctcaccaacactgaaatcactgccaccacttctctccccagcttc
agtacctttatggacaactacagcacaggctacgacgtcaagccaccttgcttgtaccaa
atgcccctgtccggacagcagtcctccattaaggtagaagacattcagatgcacaactac
cagcaacacagccacctgcccccccagtctgaggagatgatgccgcactccgggtcggtt
tactacaagccctcctcgcccccgacgcccaccaccccgggcttccaggtgcagcacagc
cccatgtgggacgacccgggatctctccacaacttccaccagaactacgtggccactacg
cacatgatcgagcagaggaaaacgccagtctcccgcctctccctcttctcctttaagcaa
tcgccccctggcaccccggtgtctagttgccagatgcgcttcgacgggcccctgcacgtc
cccatgaacccggagcccgccggcagccaccacgtggtggacgggcagaccttcgctgtg
cccaaccccattcgcaagcccgcgtccatgggcttcccgggcctgcagatcggccacgcg
tctcagctgctcgacacgcaggtgccctcaccgccgtcgcggggctccccctccaacgag
gggctgtgcgctgtgtgtggggacaacgcggcctgccaacactacggcgtgcgcacctgt
gagggctgcaaaggcttctttaagcgcacagtgcaaaaaaatgcaaaatacgtgtgttta
gcaaataaaaactgcccagtggacaagcgtcgccggaatcgctgtcagtactgccgattt
cagaagtgcctggctgttgggatggtcaaagaagtggttcgcacagacagtttaaaaggc
cggagaggtcgtttgccctcgaaaccgaagagcccacaggagccctctcccccttcgccc
ccggtgagtctgatcagtgccctcgtcagggcccatgtcgactccaacccggctatgacc
agcctggactattccaggttccaggcgaaccctgactatcaaatgagtggagatgacacc
cagcatatccagcaattctatgatctcctgactggctccatggagatcatccggggctgg
gcagagaagatccctggcttcgcagacctgcccaaagccgaccaagacctgctttttgaa
tcagctttcttagaactgtttgtccttcgattagcatacaggtccaacccagtggagggt
aaactcatcttttgcaatggggtggtcttgcacaggttgcaatgcgttcgtggctttggg
gaatggattgattccattgttgaattctcctccaacttgcagaatatgaacatcgacatt
tctgccttctcctgcattgctgccctggctatggtcacagagagacacgggctcaaggaa
cccaagagagtggaagaactgcaaaacaagattgtaaattgtctcaaagaccacgtgact
ttcaacaatggggggttgaaccgccccaattatttgtccaaactgttggggaagctccca
gaacttcgtaccctttgcacacaggggctacagcgcattttctacctgaaattggaagac
ttggtgccaccgccagcaataattgacaaacttttcctggacactttacctttctaa

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_6|265_aa
MDKFLDTYIFPTLNQEEVESLNRPITGSETEAIKVQDQTDSQPNSTREFSPVGHWGHNIV
QKITLPYVGKNCPLSQQSPTFLAPGTGFMDNFSTDLRSGIDSKSQVNGAKLDFPPKYNSV
SRRRRSWISVSTSTRCVLNVISSDGHRRAAAAAAAAAAAATSGGNLRWSRRFPRGCGAKE
PAASWGSRRASDGNASPAAGELGAAGSRQRRGCRLGLSSPGSRIVPRSHRPVLRTRVGGQ
VAKGSRLPGNEPHRERRGGWDALRE

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_6|798_bp
atggataaattcctggacacatacatcttcccaacactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaactgaggcaataaaagtccaggatcagacagat
tcacagccgaattctaccagagaattctccccagtaggacactggggtcacaacattgtg
cagaagattacacttccctatgttggtaaaaactgtccactaagtcaacagtcccccacg
tttttggcaccagggactggtttcatggacaatttttccacggacctgcggtcggggata
gactctaagtctcaagttaatggcgctaagctagattttccccccaagtacaattccgtc
agccgtcgtcggcgcagctggatttccgtaagcaccagcactcgatgtgtcttaaatgtg
atcagtagtgatgggcatcgccgagcagcggcggcggcggcagcagcagcggcagccgca
acatctgggggaaacttaaggtggtcacgtaggtttccccgaggctgcggcgcaaaagag
cccgcggcttcctggggcagccgcagggcatctgatggcaacgcctccccagccgccggc
gagctgggggcagcagggagtaggcaaaggcggggctgcagattagggttgagcagcccg
ggatcccgaatagttccacggagccatcggccggtactgagaacacgagtaggggggcaa
gttgcaaaagggtcccggctgcctggaaacgagccacaccgagaaaggaggggcggctgg
gacgctctgcgcgagtag

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_7|112_aa
MGRNQSRKAENSKNQTASSPPKECSSLPAMEQSWMENDFDELREEGFRRSVTTNFSKLKE
DVRTHRKEAKNLEKRLDEWLTIINSVEKTLNDLMELKTMAQELCDACTSFSS

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_7|339_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaatcagactgcctcttctcct
ccaaaggaatgcagctccttgccagcaatggaacaaagctggatggagaatgactttgat
gagttgagagaagaaggcttcagacgatcggtaacaacaaacttctccaagctaaaggag
gatgttcgaacccatcgcaaagaagctaaaaaccttgaaaaaagattagacgaatggcta
actataataaacagtgtagagaagaccttaaatgacctgatggagctgaaaaccatggca
caagaactatgtgacgcatgcacaagcttcagtagctga

>gi568815596r:156225747_156430186|GENSCAN_predicted_peptide_8|151_aa
MKPHSRALLLDVGSLGSWRDPVPCAATAAGLPGAQCLPELAPPQAYCAGSADPGGRGVSG
LWLCCRVEPRSKPRARAQRSGRAASVASGAHGDWFMEQKGGDLLFAHENVMDLPEHSSPP
KINAHLRKTTCSHQIPIPCLCKGYSQITPCR

>gi568815596r:156225747_156430186|GENSCAN_predicted_CDS_8|456_bp
atgaagcctcactccagagcacttctgctggacgtcgggagcctgggatcctggagggat
ccggtgccctgcgcggccacagcggcgggactcccgggtgcccaatgcctgccggagctg
gcacctccccaggcttattgcgcaggcagcgcagatccaggaggccgtggtgtgtccggc
ctctggctttgctgccgggtagaaccccggtccaaacctcgagcccgggcccagcgctcg
ggccgcgccgcgagcgtcgcctcgggtgctcatggagactggttcatggagcagaaaggt
ggagaccttctctttgcacacgaaaatgttatggatttacctgaacactcttcacccccg
aaaataaatgcacatctcaggaaaaccacgtgttcacaccaaatccccataccttgctta
tgtaagggttacagccagataaccccttgcagataa