GENSCAN 1.0	Date run:  8-Nov-116	Time: 06:21:37

Sequence gi568815596f:98269976_98497252 : 227277 bp : 44.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    707    908  202  2  1  126   90   125 0.993  15.79
 1.02 Intr +   6916   7083  168  0  0   67   50    62 0.235   0.44
 1.03 Intr +   8472   8600  129  2  0   70   30    73 0.132   0.59
 1.04 Intr +  20536  20647  112  0  1  114   68    52 0.738   5.75
 1.05 Intr +  27932  28056  125  0  2   92   80   113 0.990  11.20
 1.06 Intr +  30104  30241  138  1  0  104   89   184 0.999  20.76
 1.07 Intr +  32087  32177   91  1  1  108   52    44 0.529   2.37
 1.08 Intr +  36097  36229  133  2  1   64   72    14 0.128  -2.90
 1.09 Intr +  41598  41816  219  0  0   31   53   186 0.840   6.82
 1.10 Intr +  41844  42057  214  0  1  101  -15   210 0.668  10.72
 1.11 Term +  43874  43990  117  1  0   46   39   162 0.981   5.64
 1.12 PlyA +  44750  44755    6                               1.05

 2.00 Prom +  48270  48309   40                              -1.96
 2.01 Sngl +  50585  50989  405  1  0   48   44   154 0.895   3.28
 2.02 PlyA +  52231  52236    6                               1.05

 3.05 PlyA -  52274  52269    6                               1.05
 3.04 Term -  73091  72995   97  1  1  101   45    88 0.814   3.24
 3.03 Intr -  77114  76873  242  2  2   97   86    68 0.540   3.85
 3.02 Intr -  78918  78874   45  0  0   90   82    37 0.632   1.91
 3.01 Init -  87498  87430   69  0  0   98   94    23 0.734   4.95
 3.00 Prom -  90061  90022   40                              -6.56

 4.00 Prom +  91151  91190   40                              -6.46
 4.01 Init + 100001 100101  101  1  2   88  110    48 0.739   6.74
 4.02 Intr + 107712 107825  114  0  0   47   93   131 0.920   9.06
 4.03 Intr + 110200 110379  180  1  0   96  116    97 0.883  12.28
 4.04 Intr + 113413 113466   54  1  0  127   83    62 0.820   7.69
 4.05 Intr + 119683 119799  117  1  0   67  115   219 0.589  22.08
 4.06 Intr + 121889 121995  107  2  2   52  109   202 0.956  18.56
 4.07 Term + 125869 127280 1412  2  2  119   48  2182 0.999 208.52
 4.08 PlyA + 128603 128608    6                               1.05

 5.05 PlyA - 128981 128976    6                               1.05
 5.04 Term - 135467 135361  107  0  2   10   48    90 0.056  -4.23
 5.03 Intr - 135732 135649   84  1  0   68  110    21 0.098   2.09
 5.02 Intr - 147416 147314  103  2  1   48   82    95 0.150   4.65
 5.01 Init - 160693 160607   87  1  0   68   69    64 0.204   3.14
 5.00 Prom - 171246 171207   40                              -4.06

 6.02 PlyA - 171679 171674    6                               1.05
 6.01 Sngl - 175498 174650  849  1  0   67   42   314 0.909  19.59
 6.00 Prom - 194853 194814   40                              -3.96

 7.11 PlyA - 196802 196797    6                               1.05
 7.10 Term - 197665 197486  180  1  0   -6   38   137 0.170  -3.09
 7.09 Intr - 200546 200414  133  1  1  110   89    65 0.990   9.45
 7.08 Intr - 202201 202014  188  1  2   65   37   120 0.792   3.09
 7.07 Intr - 204744 204685   60  0  0   64   94    46 0.492   1.73
 7.06 Intr - 207396 207218  179  1  2   74  -18   138 0.217   1.44
 7.05 Intr - 211351 211257   95  0  2   82   60    41 0.089   0.31
 7.04 Intr - 214511 214393  119  2  2   92   53    25 0.150  -1.34
 7.03 Intr - 219219 219158   62  1  2  145   65    42 0.483   6.05
 7.02 Intr - 220367 220207  161  1  2  110   82    -1 0.734   1.13
 7.01 Init - 220868 220735  134  2  2   22   94    88 0.541   2.43

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_1|549_aa
XLDANKPIQYLENKTVLNQALERLNWPISLKELSMLESEILAGKMYIQQAMELQEAAKKN
YANKAPGELPCRFLSLGQLHDFSVSKNQRWEGDTAANAVSREPVPAFYAPASTGSSWLAQ
MRPKLLFSMQEESGHTNKLKMVNTGNFIADESDSQQDGELERGWSGKQQKLQGNPTKKTK
SKRPDPLKGQKVIARCDENGFYFPGVVKKCVSRTQALVGFSYGDTKVVSTSFITPVGGAM
PCPLLQVGDYVFAKIVIPKGFDFYVPAIVIALPNKHVATEKFYTVLKCNNRRGVCPQDPS
VAPAGSMSLTSSQVEDSLLPECGLCAFTRLSILPGQLFLALSHLGNSKTELKRQHHHVMS
QHPSPPRTGPYTQVLRAVGGSQTPKARGNELSGPKPSLKHWVHSAPETPFHGKRDVGKEL
RSSRGDGLDISVDPAAIKAGEDVEARNSAFLFWPLKEADTQDSREPRREKPRRKKRPAKQ
PLQQAAPSDSDGSSHGISSHGSCQGTHPEPRCTRPSFDVFNDSAYFSVMEEVAITTVNFH
LQPIQNGSN

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_1|1650_bp
nngttagatgcaaacaaaccaatacagtacttggaaaacaaaacagttttaaaccaggct
ttagaacggttgaattggcccatttcactgaaagagctgtcgatgctggaaagtgaaatc
ctagctgggaaaatgtacatccagcaggccatggaactccaggaggctgccaagaagaat
tatgcaaacaaggccccgggagagctgccttgccgattcctaagtttggggcagcttcat
gatttttctgtcagtaagaaccagcggtgggaaggagacacggcagcaaatgctgtgtcc
agggagcctgtgcctgctttttatgctccagcttccacgggcagttcctggctggcccag
atgagacctaaactcttgttcagcatgcaggaagaatcaggtcacacgaacaaattgaag
atggtaaatacagggaattttattgctgatgaaagtgactctcagcaggatggagagcta
gaaaggggatggagtgggaagcaacagaaattgcaaggaaatccaacaaagaaaaccaaa
tcaaaaagaccagatcccctcaaaggacagaaggttattgcaagatgtgatgaaaatggc
ttttattttccaggggttgtgaagaagtgtgtgagccgcacccaagcactggtgggcttc
agttacggagacaccaaggtcgtgtccacctccttcatcacgcctgtggggggcgccatg
ccctgcccgctgctccaggttggagattatgtgtttgccaaaattgtgatacccaaagga
tttgacttctatgtccctgccattgtcatagcacttcccaataagcatgtggccacagaa
aaattctacacagttttgaagtgtaacaaccggagaggagtatgcccccaggaccccagt
gtggccccagccggctccatgagcttgacctccagccaggtggaagactcactgcttcct
gaatgcggtctctgtgccttcaccagattaagtattctccctggacagctattccttgcc
ctcagccacctggggaactccaagactgagctcaaacgtcaacaccaccatgtgatgtcc
cagcaccctagcccccccaggacgggtccgtatactcaagttctccgtgccgtgggaggc
tcccaaacaccaaaggctcgtggaaatgaactgagtggacctaagcccagcctaaagcat
tgggttcacagcgctccagagactcctttccatgggaagagggacgtgggcaaggagctg
agaagcagccgtggggatggcttggacatctctgtagaccccgcagccatcaaggcagga
gaggatgtggaggcgaggaactctgctttcctcttctggccactgaaagaagcggacacg
caggattccagagagccaagacgagagaagcccaggaggaaaaagaggcccgccaagcag
ccactccagcaggcggcgccctcggactcggacggctcctcccacggcatcagctcccat
gggtcctgccaggggacacaccccgagcccaggtgcacaaggccatcatttgatgtgttc
aatgatagtgcctacttcagtgtaatggaggaagttgcaattacaacggtgaacttccac
ctccaaccaatacagaatggcagcaactag

>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_2|134_aa
MDNKVQAVVDSDGDEEIVGNCSKGCLCYAKRLAAFCLCSRDLWNFEIERDDLGYLVEEIS
KQQSTQEVTERRSSENLQPNDAIGEKTPFSGEKFQPTAEICISNEEPNANHQDNGENVSR
PCQRPSWQPLPSQA

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_2|405_bp
atggacaataaagtccaggctgtggtggactcagatggagatgaggaaattgttgggaac
tgtagtaaaggttgcctttgctatgcaaagagactggcagcattttgcctctgctctaga
gatctgtggaactttgaaattgagagagatgatttagggtatctggtggaagaaatttct
aagcagcaaagcactcaagaggtgacagagcgtagaagttcggaaaatttgcagcccaat
gatgcaataggagagaaaacgccattttctggggagaaattccagccaactgcagaaata
tgcataagtaatgaggagccaaatgctaatcaccaagacaatggggaaaatgtctccagg
ccctgtcagagaccttcatggcagcccctcccatcacaggcctag

>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_3|150_aa
MGAMQDGEEILNSALGTIKEASQGSVITSIYTRNAGHLATDSTSPGAARTREDAAPAPDL
EPGKWVLPGLAVRGQRDRRKCMGWGRGCKPYPSPAGASPAPSASRPDGSAGSAQRGCGTS
ALQTVAIGAALKTPVPAFHSPNFYCLTINA

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_3|453_bp
atgggtgcaatgcaggatggggaggaaatccttaattctgccttagggaccattaaggag
gcttcccagggctctgttatcacctccatttacacccggaatgcaggccacctggccact
gactcaacctcccccggcgcggcgcggactcgagaagacgcggcgcccgctcccgacttg
gagccggggaagtgggtccttcccggactggcggtccggggacagcgtgacaggaggaaa
tgtatggggtggggtcgcggctgcaagccctacccgtccccagcgggagccagccctgct
ccttctgcctcccgccccgacggctcagcgggctcggcccagcgcggctgtgggacgtca
gctttgcaaacagtcgctataggggctgcccttaagaccccagtgccagctttccactct
ccaaatttctactgtctgaccatcaatgcctga

>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_4|694_aa
MAKINTQYSHPSRTHLKVKTSDRDLNRAENGLSRAHSSSEETSSVLQPGIAMETRGLADS
GQGSFTGQGIARLSRLIFLLRRWAARHVHHQDQGPDSFPDRFRGAELKEVSSQESNAQAN
VGSQEPADRGRSAWPLAKCNTNTSNNTEEEKKTKKKDAIVVDPSSNLYYRWLTAIALPVF
YNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDVLVRARTGFLEQGLMVSDTNRLW
QHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFNRLLKFSRLFEFFDRTETRTNYPNM
FRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEHGRLSRKYIYSLYWST
LTLTTIGETPPPVKDEEYLFVVVDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSI
KQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLKKV
RIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVV
LSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEE
KGRQILMKDNLIDEELARAGADPKDLEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQ
RLSQLESQVKGGGDKPLADGEVPGDATKTEDKQQ

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_4|2085_bp
atggccaagatcaacacccaatactcccacccctccaggacccacctcaaggtaaagacc
tcagaccgagatctcaatcgcgctgaaaatggcctcagcagagcccactcgtcaagtgag
gagacatcgtcagtgctgcagccggggatcgccatggagaccagaggactggctgactcc
gggcagggctccttcaccggccaggggatcgccaggctgtcgcgcctcatcttcttgctg
cgcaggtgggctgccaggcatgtgcaccaccaggaccagggaccggactcttttcctgat
cgtttccgtggagccgagcttaaggaggtgtccagccaagaaagcaatgcccaggcaaat
gtgggcagccaggagccagcagacagagggagaagcgcctggcccctggccaaatgcaac
actaacaccagcaacaacacggaggaggagaagaagacgaaaaagaaggatgcgatcgtg
gtggacccgtccagcaacctgtactaccgctggctgaccgccatcgccctgcctgtcttc
tataactggtatctgcttatttgcagggcctgtttcgatgagctgcagtccgagtacctg
atgctgtggctggtcctggactactcggcagatgtcctgtatgtcttggatgtgcttgta
cgagctcggacaggttttctcgagcaaggcttaatggtcagtgataccaacaggctgtgg
cagcattacaagacgaccacgcagttcaagctggatgtgttgtccctggtccccaccgac
ctggcttacttaaaggtgggcacaaactacccagaagtgaggttcaaccgcctactgaag
ttttcccggctctttgaattctttgaccgcacagagacaaggaccaactaccccaatatg
ttcaggattgggaacttggtcttgtacattctcatcatcatccactggaatgcctgcatc
tactttgccatttccaagttcattggttttgggacagactcctgggtctacccaaacatc
tcaatcccagagcatgggcgcctctccaggaagtacatttacagtctctactggtccacc
ttgacccttaccaccattggtgagaccccaccccccgtgaaagatgaggagtatctcttt
gtggtcgtagacttcttggtgggtgttctgatttttgccaccattgtgggcaatgtgggc
tccatgatctcgaatatgaatgcctcacgggcagagttccaggccaagattgattccatc
aagcagtacatgcagttccgcaaggtcaccaaggacttggagacgcgggttatccggtgg
tttgactacctgtgggccaacaagaagacggtggatgagaaggaggtgctcaagagcctc
ccagacaagctgaaggctgagatcgccatcaacgtgcacctggacacgctgaagaaggtt
cgcatcttccaggactgtgaggcagggctgctggtggagctggtgctgaagctgcgaccc
actgtgttcagccctggggattatatctgcaagaagggagatattgggaaggagatgtac
atcatcaacgagggcaagctggccgtggtggctgatgatggggtcacccagttcgtggtc
ctcagcgatggcagctacttcggggagatcagcattctgaacatcaaggggagcaagtcg
gggaaccgcaggacggccaacatccgcagcattggctactcagacctgttctgcctctca
aaggacgatctcatggaggccctcaccgagtaccccgaagccaagaaggccctggaggag
aaaggacggcagatcctgatgaaagacaacctgatcgatgaggagctggccagggcgggc
gcggaccccaaggaccttgaggagaaagtggagcagctggggtcctccctggacaccctg
cagaccaggtttgcacgcctcctggctgagtacaacgccacccagatgaagatgaagcag
cgtctcagccaactggaaagccaggtgaagggtggtggggacaagcccctggctgatggg
gaagttcccggggatgctacaaaaacagaggacaaacaacagtga

>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_5|126_aa
MTQRKEDLRKSLDVVHGEEESQQMAKVTQACTATANEEKIMGQSHSDTDTTSAHLISLTS
TVAAISALGGTPIPGMLWFLQTLRCITLVVSDLKPAQYLVMPKASSDHCPATTYIHSRPK
GYTISR

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_5|381_bp
atgacccagagaaaggaagatttaagaaaaagcctagacgttgttcatggagaagaagag
agtcagcaaatggcaaaagtcacacaggcttgcacagccactgcaaatgaggagaaaatc
atgggacagtcacactcagacaccgacaccacttctgctcacctcatcagcctaacttca
acggtggctgccatatctgctttagggggcaccccaatcccgggaatgctgtggttcttg
cagactcttagatgtatcaccttggtggtctcagacctgaagccagcacagtacttggtc
atgcccaaggcctccagtgaccactgcccggctaccacctatattcactcaaggcccaag
ggctatacaatcagcagatga

>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_6|282_aa
MHVYFHPVMFPPQTRQGLQLQEPVDPALEPHRAGTASASRGHAPARHPAPCWGGRVFTGL
GVGRARIVLKRRHRRWTTGTVRQCNFHENRGRRPHPPQRGPGRAPAPAVRPRPRPPRRPR
RLLPGPAHLPGAPRPPAPAAPLSRRAARQSPAAAAAPPPGCEVAGCGPGLRCWSSCPGPR
SPTRRQTSSEPSTRAAALASRRRSRRRAQPRPGPAPLSRMRAEGPARALRPPPHYQPELG
PPSETVGPVTELLAPIPTARFPQDPTLSCDCFTCKEFLNFWT

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_6|849_bp
atgcatgtttactttcacccggttatgtttccaccccaaacacggcaaggcctccagctt
caggagcccgtagacccagccctggagccgcatcgggcaggcaccgcgtctgcgtcccgc
ggccacgcgcccgctcggcacccggctccctgctggggcggccgcgtcttcacggggctg
ggggtcggccgggctcggattgttctcaaaagacgccaccgcaggtggaccactggcacc
gttaggcagtgcaatttccatgaaaaccgcgggcgccgtccacatccgccccagcgggga
cctggacgcgcccccgcgcccgctgtccgtccccggccccggcccccgcggcggccgcgt
cgcctcctgcccggcccggcccacctacctggcgctccccggcccccggcgccagccgcc
ccgctgtcccgccgggctgcgcgccagagccccgcagcagcagcagcgccgccgcctggc
tgtgaagtcgcgggctgcgggcccggcctcaggtgctggtcctcctgccccggcccacgg
agcccgacccggcggcaaaccagcagcgaaccctccacgcgcgccgcagccctagccagc
cgccgccgctctagacgccgggcgcagccccgccctggccccgcccccttgtcgcgcatg
cgcgctgagggcccggcccgcgccctgcgacccccgccccactaccagcccgagctgggt
ccgccctctgagacagtagggccggtgaccgagctgctcgcgccaattcctactgctagg
ttcccacaagatcccaccctatcctgtgactgcttcacctgcaaggagttcttgaacttc
tggacttga

>gi568815596f:98269976_98497252|GENSCAN_predicted_peptide_7|436_aa
MTAKGLIKLKLLFGRRQAEDLHPHQLQVTVGDSGLIYSEAQASHRDSHVICSMLRKRKPD
ETPSPSSDAQFSGMLAVAVSSLLCPRSSPSQQWHCHSPSTTILGSSDVSDTSFQPSTKLG
PVHGFPPQSRDCILDFELIRKVTGAWSSLTAGSWETKIQEFSEEDILAPHRITPGPHSSK
SPVHFLASLWGRKTKLYHHTIQDKEPRSVPEAGSSGRRDGGGAAHSMLCMAPEPDHPGSN
PNCRSPATLHADADGNLQREAAKCQGDGTQVSTHVDHTSAPRQAETGPATGENEKMESHG
RSKRGLVGADQCPAETLDSYTLLVGHKKRDKDSAWLRRRKAPPGLLAGAEAQRAMPPCGG
KGQTTKEQGLRAQKQRQEKKLHIKNTEVKSMEAEKIISTQFQGQRTLMMLGSLDLLSPHV
DGVANIADSFTVLTAT

>gi568815596f:98269976_98497252|GENSCAN_predicted_CDS_7|1311_bp
atgacagccaaaggactgattaaactcaagctgttgtttggccggaggcaggcagaggat
ctccatccccaccagctgcaggtgactgttggagattctggcctcatctactcggaggcc
caggcgtcacacagagattcccatgtgatatgcagcatgctcagaaaaaggaaaccggat
gagacacccagcccttcaagtgatgcccaattttctgggatgctcgctgttgctgtgtcc
agcctgctctgcccccggtcttctccatctcagcaatggcactgccattctccaagtacc
accattcttgggagctcagatgtatctgacacctctttccaaccatcaaccaaactgggc
cctgtgcatggcttcccaccccagtcacgtgactgcattctggactttgagctcatcagg
aaagtaactggggcttggtcttccctgactgcaggatcatgggaaacaaagatacaggaa
ttttcagaggaagacatccttgctccacacaggatcacaccaggtccacattcctccaag
tctcctgttcacttcctggcctctctgtggggcaggaagaccaagctgtaccaccacacc
attcaggacaaagagccaagaagcgtgcctgaagcaggcagctcagggagacgggacggc
gggggagctgcacacagcatgctgtgcatggccccagagccagaccatccgggctccaac
cccaactgccgctcacccgccacgctacacgctgatgctgatggcaatctgcaaagagag
gctgccaaatgtcagggtgatggcacccaggtctccacccatgtggaccatacttctgct
ccacggcaggcagaaacaggcccagccacaggagagaacgagaaaatggagtcacatggg
agatcaaaaagaggccttgttggagcagaccaatgcccagctgaaactcttgattcctac
accctccttgtggggcacaaaaagagggacaaggacagtgcctggctgagaaggcgaaag
gccccaccaggcctccttgcaggggccgaagcccagcgggccatgcctccctgcggaggg
aagggacagaccactaaggagcaaggacttagagctcagaagcagcgccaagaaaagaag
cttcacatcaagaacacagaagttaaatccatggaggctgagaagataatttccactcag
ttccaagggcaaaggacactgatgatgctaggttcactggacctgttgtccccacatgtg
gacggtgtcgctaacattgctgacagcttcacagtcttaacagcaacataa