GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:53:36

Sequence gi568815596r:69860660_70061688 : 201029 bp : 44.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    619    688   70  2  1   69   98    41 0.475   1.44
 1.02 Intr +   4241   4316   76  2  1   68  100    25 0.710   1.22
 1.03 Term +   9060   9209  150  2  0   95   45   132 0.893   7.51
 1.04 PlyA +   9259   9264    6                               1.05

 2.04 PlyA -  11062  11057    6                               1.05
 2.03 Term -  13164  12903  262  2  1  127   38   414 0.998  35.30
 2.02 Intr -  33366  33203  164  0  2   45   64   149 0.966   6.97
 2.01 Init -  35757  35701   57  0  0   57   83    27 0.445   0.41
 2.00 Prom -  36883  36844   40                              -1.76

 3.03 PlyA -  37242  37237    6                               1.05
 3.02 Term -  42090  41665  426  0  0 -163   44  1091 0.604  74.90
 3.01 Init -  51537  51490   48  0  0   49   86    25 0.421  -0.65
 3.00 Prom -  52669  52630   40                              -7.76

 4.00 Prom +  52730  52769   40                              -7.06
 4.01 Init +  54353  54409   57  1  0   62  101    44 0.291   2.79
 4.02 Intr +  54603  54744  142  2  1   -5   40   256 0.252  11.43
 4.03 Intr +  55462  55561  100  2  1  112   91    74 0.646   9.27
 4.04 Intr +  61077  61106   30  0  0   94   95    37 0.380   2.25
 4.05 Intr +  74692  74806  115  1  1   84  115   -20 0.466   0.75
 4.06 Intr +  76576  76735  160  0  1   86   72   277 0.972  25.46
 4.07 Term +  77438  77625  188  0  2  112   48   269 0.996  22.95
 4.08 PlyA +  82261  82266    6                               1.05

 5.03 PlyA -  82983  82978    6                               1.05
 5.02 Term -  85219  84939  281  2  2  117   48   106 0.608   5.11
 5.01 Init -  88553  88475   79  2  1   77   98    31 0.794   4.39
 5.00 Prom -  96022  95983   40                              -5.56

 6.03 PlyA -  99453  99448    6                               1.05
 6.02 Term - 100903  99998  906  1  0   73   54   987 0.889  86.10
 6.01 Init - 101334 101197  138  0  0   59   54   156 0.402   7.47
 6.00 Prom - 102039 102000   40                              -5.36

 7.00 Prom + 107571 107610   40                              -4.26
 7.01 Init + 116027 116071   45  1  0   73   95    68 0.173   4.68
 7.02 Term + 142036 142212  177  0  0   93   48   110 0.575   5.19
 7.03 PlyA + 144961 144966    6                               1.05

 8.00 Prom + 145579 145618   40                              -1.16
 8.01 Init + 187828 187972  145  0  1   77   95    98 0.614   9.68
 8.02 Term + 193084 193160   77  2  2   75   43    54 0.444  -2.40
 8.03 PlyA + 193637 193642    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_1|98_aa
XWLSSVYKQQWFAMLRAEQDSEVGPQEINKEELEGNSMRCGRKLAKDGEYCWRWTGFNFG
FDLLVTYTNRYIIFKRNTLNQPCSGSVSLQPRRSIAFR

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_1|297_bp
naatggctctcttctgtgtataaacagcagtggtttgctatgctgcgggcagaacaggac
agtgaggtggggcctcaagaaatcaataaagaagaactagagggaaacagcatgaggtgt
ggtagaaagcttgccaaagatggtgaatactgctggcgttggacaggttttaacttcggc
ttcgacctacttgtaacttacaccaatcgatacatcattttcaaacgcaatacactgaat
cagccatgtagcggatctgtcagtttacagcctcgaaggagcatagcatttaggtag

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_2|160_aa
MLETDRHINFVSISTDIHEDSPLRGERLRLRPIWSPASRKQLCNNFREGREPSFYRRPEN
VKTSCEGSGLLCSRPDHYATNKFSQATDLAMKKTEDNNALVFIVDVEVKKHKIKQAVEEL
YDTNVAKINTVIRADGEKKAHVQLAPEHAAFRGCQKIGII

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_2|483_bp
atgttagaaacagacagacatatcaactttgtatcaatcagcacagatatacatgaggac
tcacccctccgtggagagcggctgcgactgcgacccatttggagtcccgcttcccggaaa
caactgtgcaacaacttccgggagggccgggaaccgagcttttaccgccgaccagaaaac
gtcaaaacgagttgcgagggttccggtcttctttgttcacggcctgaccactatgcgacc
aacaagttctcccaggccactgacttggccatgaagaagacagaggacaacaatgcactt
gtgttcattgtggatgtcgaggtcaaaaagcataagatcaaacaggctgtggaggagctc
tatgacaccaatgtggccaagatcaacaccgtgatcagggctgatggagagaagaaagcc
catgttcagctggctcctgagcatgctgcttttagaggctgccaaaaaattgggatcatc
taa

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_3|157_aa
MKTFKGCLVPSTGNEVKQQQQKKLKQQQQKQKKKQEQQKEQQKEQQKKQKQKKQEQQQHK
QQKKQKHKQQKQKKQKQQKEQQKQQKQKQKLEQQQHKQQQQQRKQKQQQQKPKKKQEQQK
EQQKKQTQKQNQKKQEQQQEKQHKQKQQQEQQQQQRK

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_3|474_bp
atgaagaccttcaaagggtgtttggtgccatctactggaaatgaagtaaagcagcagcag
cagaagaaactgaaacagcagcagcagaagcagaagaagaagcaagagcagcagaaggag
cagcagaaggagcagcagaagaagcagaagcaaaagaagcaagagcagcagcagcacaag
cagcagaagaagcagaaacacaagcagcagaagcagaagaagcaaaagcagcagaaggag
cagcagaagcagcagaagcagaagcagaagctagagcagcagcagcacaagcagcagcag
cagcagaggaaacagaaacagcagcagcagaagccgaagaagaagcaagagcagcagaag
gagcagcagaagaagcagacgcagaagcagaaccagaagaagcaggagcagcagcaggag
aagcagcacaaacagaagcagcagcaagagcagcagcagcagcagcggaagtag

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_4|263_aa
MRNAAEAGLSREGAGGGEMRSGGGSEPVGSGGWSRGSGPRCRMAAAVRMNIQMLLEAADY
LERREREAEHGYASMLPYNNKDRDALKRRNKSKKNNSSSRSTHNEMEKNRRAHLRLCLEK
LKGLVPLGPESSRHTTLSLLTKAKLHIKKLEDCDRKAVHQIDQLQREQRHLKRQLEKLGI
ERIRMDSIGSTVSSERSDSDREEIDVDVESTDYLTGDLDWSSSSVSDSDERGSMQSLGSD
EGYSSTSIKRIKLQDSHKACLGL

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_4|792_bp
atgaggaacgcggccgaagctggcctgtcaagagaaggggctgggggcggggagatgcgg
tccggcggcggcagcgagcccgtgggcagtgggggttggtcccgtggctccggcccccgg
tgcagaatggcggcggcggttcggatgaacatccagatgctgctggaggcggccgactat
ctggagcggcgggagagagaagctgaacatggttatgcctccatgttaccatacaataac
aaggacagagatgccttaaaacggaggaacaaatccaaaaagaataacagcagtagcaga
tcaactcacaatgaaatggagaagaatagacgggctcatcttcgcttgtgcctggagaag
ttgaaggggctggtgccacttggacccgaatcaagtcgacacactacgttgagtttatta
acaaaagccaaattgcacataaagaaacttgaagattgtgacagaaaagccgttcaccaa
atcgaccagcttcagcgagagcagcgacacctgaagaggcagctggagaagctgggcatt
gagaggatccggatggacagcatcggctccaccgtctcctcggagcgctccgactccgac
agggaagaaatcgacgttgacgtggagagcacggactatctcacaggtgatctggactgg
agcagcagcagtgtgagcgactctgacgagcggggcagcatgcagagcctcggcagtgat
gagggctattccagcaccagcatcaagagaataaagctgcaggacagtcacaaggcgtgt
cttggtctctaa

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_5|119_aa
MVLGIGSEPQGACRVCSGRGPCEHQAGKAKSILEKPLPFSPGPEWASLAPIPPVHPLRPG
LRCMPLASVLALPVVIPLDKMVRLSHYIPSLPSPDTLPSPTAGEAPGSFSQLEPALPSA

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_5|360_bp
atggtcctgggcattgggtcagagccgcagggggcctgcagggtctgctccggcagaggt
ccgtgtgaacatcaagcaggcaaggccaagagcatcctagaaaagcccctgcccttttct
ccagggcctgagtgggcctctctagctccaatacccccagtccacccgctcagacctggc
ctcaggtgcatgcccttggcctccgtcctggctcttcctgtggtcatccctttggataag
atggttcgcctgtcccattacatccctagcctgccttcaccagacacgctgccttcaccc
acagccggggaggctcccggaagcttcagccagttagagcctgccctgccgtctgcctga

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_6|347_aa
MAASPVSELMGVWSLPPLPSLADDKYLNVITSSVSSSVILEHRPGRAGQVIPTLLREAPF
SSVIAPTLLCGFLFLAWVAAEVPEESSRMAGSGARSEEGRRQHAFVPEPFDGANVVPNLW
LHSFEVINDLNHWDHITKLRFLKESLRGEALGVYNRLSPQDQGDYGTVKEALLKAFGVPG
AAPSHLPKEIVFANSMGKGYYLKGKIGKVPVRFLVDSGAQVSVVHPNLWEEVTDGDLDTL
QPFENVVKVANGAEMKILGVWDTAVSLGKLKLKAQFLVANASAEEAIIGTDVLQDHNAIL
DFEHRTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSEEGRQELSH

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_6|1044_bp
atggcggcttccccggtctctgagctgatgggcgtctggtccctgcctccccttccttca
ctggctgatgacaaatacctgaatgtcatcacatcctccgtgtcctcatctgttattctg
gaacacaggccagggagggccgggcaagtcatccccactctgcttcgagaggccccgttt
tccagcgtgattgcgccgacactgctctgtgggtttctcttcttggcgtgggttgctgct
gaggttccagaggagagcagcaggatggccgggagcggagccaggagtgaggaaggccgc
cggcagcatgccttcgtcccggaaccttttgatggggccaatgtcgtcccaaacctctgg
ctgcacagctttgaagtcatcaatgacctcaaccattgggaccatatcaccaagctaagg
ttcctgaaagagtccctcagaggagaggccctgggtgtctacaataggctcagtccccag
gaccagggagactatgggactgtgaaagaggccctcctgaaggcctttggggtccctggg
gctgcccccagccacctgcccaaagagatcgtctttgccaacagcatgggtaagggctac
tatctcaaggggaagattggcaaagtgcccgtgaggttcctggtggactctggggcccag
gtctctgtggtccacccaaacttgtgggaggaggtcactgatggcgatctggacaccctg
cagccctttgagaatgtggtaaaggtggccaatggtgctgaaatgaagatcctgggtgtc
tgggatacagcggtgtccctaggcaagctgaagctgaaggcacagttcctagtggccaat
gcgagtgccgaggaagccatcattggcactgatgtgctccaggaccacaatgctatcctg
gactttgagcaccgcacatgcaccctgaaagggaagaagtttcgccttctgcctgtggga
gggtccctggaagatgagtttgacctggagctcatagaggaggacccctcctcagaagaa
gggcggcaggagctatcccactga

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_7|73_aa
MAGPLPFPLQAQSVLCKVGFDPREHFPSIYNFTSLLLEASSEKVPPFLNWGADQNSPMSL
VFKVSFTSSPSSF

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_7|222_bp
atggctggccccctccctttccccctccaggcacagagtgtcctgtgcaaagttggcttt
gatccaagggagcacttcccctccatctacaacttcacatctttgctgttggaggcctct
tctgagaaagtacctcctttcttaaactggggggctgatcagaatagccctatgtccctg
gtgtttaaagtcagcttcaccagctccccctcgtccttctga

>gi568815596r:69860660_70061688|GENSCAN_predicted_peptide_8|73_aa
MAMVKVETQQQQQQEVWNLCTASTVGAYRDLKVFDFSGPQFPLSENEDAGNITLMYASQV
PNTLGLQVEEIPC

>gi568815596r:69860660_70061688|GENSCAN_predicted_CDS_8|222_bp
atggccatggtaaaggtggagacccaacaacagcaacagcaggaggtatggaatctatgc
acagccagcacagtaggggcctacagagatctcaaagtatttgacttctctgggcctcag
tttcctttatctgaaaatgaagatgcaggaaacatcacactcatgtacgcatctcaagtc
cccaacacacttggtctgcaagtggaagaaattccctgctag