GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:24:09

Sequence gi568815596r:42343937_42593501 : 249565 bp : 43.82% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -   1032   1027    6                               1.05
 1.11 Term -   7423   7283  141  1  0   72   44   199 0.999  11.83
 1.10 Intr -   9407   9276  132  2  0  126   94    81 0.999  13.34
 1.09 Intr -  17254  17154  101  2  2   54   96   114 0.264   8.63
 1.08 Intr -  41010  40926   85  0  1   60   80    77 0.202   3.49
 1.07 Intr -  63532  63481   52  0  1   84   81    93 0.098   7.11
 1.06 Intr -  63713  63598  116  2  2   17   59   124 0.065   1.65
 1.05 Intr -  64084  64007   78  1  0   83   77    63 0.078   4.45
 1.04 Intr -  64829  64751   79  1  1   67   84    39 0.054   0.95
 1.03 Intr -  71576  71547   30  1  0   84   84    44 0.001   0.85
 1.02 Intr - 100643 100035  609  1  0  117   48   225 0.021  12.93
 1.01 Init - 149565 148934  632  0  2   95   78  1635 0.078 156.02
 1.00 Prom - 162200 162161   40                              -2.86

 2.00 Prom + 205794 205833   40                              -3.76
 2.01 Init + 224810 224837   28  1  1  113   80    52 0.777   6.91
 2.02 Intr + 226501 226568   68  2  2   72   69    45 0.150  -0.38
 2.03 Intr + 235171 235264   94  0  1   91   94    50 0.339   5.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:42343937_42593501|GENSCAN_predicted_peptide_1|684_aa
MTFGRSGAASVVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNE
YFFDRHSEAFGFILLYVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRM
SDTYTFYSADEPGVLGRDEARPGGAEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVF
VIVSMVVLCASTLPDWRNAAADNRSLDDRSRIIEAICIGWFTAECIVRFIVSKNKCEFVK
RPLNIIDLLAITPYYISVLMTVFTGENSQLQRAGVTLRVLRMMRIFWVIKLARHFIGLQT
LGLTLKRCYREMVMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFTSIPAACWWVIISM
TTVGYGDMYPITVPGRILGGVCVVSGIVLLALPITFIYHSFVQCYHELKFRSARIQDEGY
ALICSFNLIIPWSRVLVLQPGRIRYADKQRLCSEIGVGTNSREKSGSGSRHFRACKLQLP
PKRGSLEEQEAWVHSHDLDGCGCTWGAPTPPIQKSQCDGSIRSRQAAVAITKLPCSSNSL
ADDHSPETGKAGTLQSWGKAADAGSRTLGVMYYKFSGFTQKLAGAWASEAYSPQGLKPVV
STEAPPIIFATPTKLTSDSTVYDYAGKNKVPELQKFFQKADGVPVYLKRGLPDQMLYRTT
MALTVGGTIYCLIALYMASQPKNK

>gi568815596r:42343937_42593501|GENSCAN_predicted_CDS_1|2055_bp
atgaccttcgggcgcagcggggcggcctcggtggtgctgaacgtgggcggcgcccggtat
tcgctgtcccgggagctgctgaaggacttcccgctgcgccgcgtgagccggctgcacggc
tgccgctccgagcgcgacgtgctcgaggtgtgcgacgactacgaccgcgagcgcaacgag
tacttcttcgaccggcactcggaggccttcggcttcatcctgctctacgtgcgcggccac
ggcaagctgcgcttcgcgccgcggatgtgcgagctctccttctacaacgagatgatctac
tggggcctggagggcgcgcacctcgagtactgctgccagcgccgcctcgacgaccgcatg
tccgacacctacaccttctactcggccgacgagccgggcgtgctgggccgcgacgaggcg
cgccccggcggggccgaggcggctccctccaggcgctggctggagcgcatgcggcggacc
ttcgaggagcccacgtcgtcgctggccgcgcagatcctggctagcgtgtcggtggtgttc
gtgatcgtgtccatggtggtgctgtgcgccagcacgttgcccgactggcgcaacgcagcc
gccgacaaccgcagcctggatgaccggagcaggataattgaagctatctgcataggttgg
ttcactgccgagtgcatcgtgaggttcattgtctccaaaaacaagtgtgagtttgtcaag
agacccctgaacatcattgatttactggcaatcacgccgtattacatctctgtgttgatg
acagtgtttacaggcgagaactctcaactccagagggctggagtcaccttgagggtactt
agaatgatgaggattttttgggtgattaagcttgcccgtcacttcattggtcttcagaca
ctcggtttgactctcaaacgttgctaccgagagatggttatgttacttgtcttcatttgt
gttgccatggcaatctttagtgcactttctcagcttcttgaacatgggctggacctggaa
acatccaacaaggactttaccagcattcctgctgcctgctggtgggtgattatctctatg
actacagttggctatggagatatgtatcctatcacagtgcctggaagaattcttggagga
gtttgtgttgtcagtggaattgttctattggcattacctatcacttttatctaccatagc
tttgtgcagtgttatcatgagctcaagtttagatctgctagaatccaggatgaaggatat
gcccttatctgctcttttaacctcatcattccatggtcccgagttcttgtgctgcaacca
ggaagaataaggtatgcagacaagcagaggctttgttctgagatcggcgtgggcaccaac
agcagggagaagtcaggcagtgggagcaggcatttccgagcctgcaagctgcagctgccc
cccaagcggggctccctggaggagcaggaggcctgggtccacagccatgacttggatggc
tgtggctgcacctggggagctcccaccccaccaattcagaagagccagtgtgatggcagc
atccgctccagacaggctgctgttgccatcaccaagcttccttgcagcagcaacagcctt
gctgacgaccacagtccagaaactggcaaggctggcaccttgcagagctgggggaaggca
gcggatgcgggaagccggactctgggcgtcatgtactacaagtttagtggcttcacgcag
aagttggcaggagcatgggcttcggaggcctatagcccgcagggattaaagcctgtggtt
tccacagaagcaccacctatcatatttgccacaccaactaaactgacctccgattccaca
gtgtatgattatgctgggaaaaacaaagttccagagctacaaaagtttttccagaaagct
gatggtgtgcccgtctacctgaaacgaggcctgcctgaccaaatgctttaccggaccacc
atggcgctgactgtgggagggaccatctactgcctgatcgccctctacatggcttcgcag
cccaaaaacaaatga

>gi568815596r:42343937_42593501|GENSCAN_predicted_peptide_2|64_aa
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLAD
KHAX

>gi568815596r:42343937_42593501|GENSCAN_predicted_CDS_2|192_bp
atggcggccaacatgtaccgggtcggagattatgtctactttgagaattcctccagcaac
ccatacctaataagaaggatagaagaactcaacaagactgcaagtggcaacgtggaagca
aaagtagtatgcttttatagacgacgtgatatttccaacacacttataatgctcgcagat
aagcatgctann