GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:33:32

Sequence gi568815596r:28750202_28970277 : 220076 bp : 40.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1837   2239  403  0  1   32    2   367 0.006  15.58
 1.02 Intr +  26650  26781  132  2  0   52   68    92 0.655   3.30
 1.03 Intr +  28608  28838  231  1  0  109  101   129 0.997  13.12
 1.04 Intr +  31537  31641  105  2  0  110   59    42 0.869   2.77
 1.05 Intr +  33706  33777   72  2  0   77  111   106 0.999  10.26
 1.06 Intr +  38457  38608  152  1  2   90   80    70 0.889   5.36
 1.07 Intr +  43662  43796  135  2  0  104   80   149 0.999  15.54
 1.08 Term +  48998  49102  105  1  0   34   49   183 0.821   6.43
 1.09 PlyA +  51048  51053    6                               1.05

 2.02 PlyA -  51962  51957    6                               1.05
 2.01 Sngl -  61300  60626  675  1  0   56   45   308 0.999  19.23
 2.00 Prom -  65752  65713   40                              -4.35

 3.00 Prom +  67372  67411   40                              -2.45
 3.01 Init +  70560  70570   11  2  2   37   77    10 0.086  -5.25
 3.02 Intr +  78947  79118  172  2  1   53   94   104 0.378   6.52
 3.03 Intr +  89971  90268  298  0  1   50   86   215 0.440  13.02
 3.04 Term +  98109  98137   29  1  2   77   54    36 0.066  -3.64
 3.05 PlyA +  98448  98453    6                               1.05

 4.07 PlyA -  99644  99639    6                               1.05
 4.06 Term - 101087 100824  264  2  0   14   44   205 0.234   3.22
 4.05 Intr - 111107 110917  191  0  2   18   92   101 0.870   1.88
 4.04 Intr - 114918 114816  103  0  1   74  110    72 0.860   6.83
 4.03 Intr - 116191 116144   48  1  0   60   53    89 0.498   0.56
 4.02 Intr - 120209 119378  832  1  1   73   90   427 0.724  31.87
 4.01 Init - 125254 125109  146  1  2   35   80   184 0.895  11.94
 4.00 Prom - 134531 134492   40                              -7.15

 5.00 Prom + 139626 139665   40                              -9.25
 5.01 Init + 142516 142518    3  0  0  113   22     0 0.184  -4.05
 5.02 Intr + 144432 144722  291  2  0  113   98   347 0.880  34.61
 5.03 Intr + 151786 151923  138  0  0  127   92    60 0.994  10.04
 5.04 Intr + 156259 156380  122  0  2  106   89    65 0.765   6.77
 5.05 Intr + 162389 162509  121  2  1   32   84    83 0.670   1.88
 5.06 Intr + 163868 164007  140  1  2   78   84   156 0.989  12.54
 5.07 Intr + 167692 167794  103  1  1   76   84    47 0.564   2.36
 5.08 Intr + 172718 172782   65  1  2   71  106    14 0.571  -1.90
 5.09 Intr + 174781 174952  172  1  1  117   76    82 0.991   8.92
 5.10 Intr + 177368 177499  132  1  0   80   80   104 0.990   8.72
 5.11 Intr + 179378 179509  132  1  0  100  101   101 0.998  12.52
 5.12 Intr + 185320 185406   87  0  0  111   78    23 0.801   2.85
 5.13 Intr + 191260 191373  114  0  0   69   89    39 0.728   1.82
 5.14 Intr + 192111 192180   70  2  1   93   98    83 0.991   7.64
 5.15 Intr + 196249 196298   50  2  2  103   81   111 0.890   9.38
 5.16 Term + 196399 196578  180  0  0   60   49   477 0.999  37.63
 5.17 PlyA + 196770 196775    6                               1.05

 6.00 Prom + 197941 197980   40                              -1.55
 6.01 Init + 201191 201309  119  1  2   62   28   157 0.729   6.82
 6.02 Intr + 201844 202054  211  1  1   75   78    92 0.792   4.89
 6.03 Term + 202162 202269  108  0  0   82   46    75 0.827   0.23
 6.04 PlyA + 202569 202574    6                               1.05

 7.04 PlyA - 203452 203447    6                               1.05
 7.03 Term - 206539 206303  237  1  0   11   42   275 0.797  10.38
 7.02 Intr - 209061 208916  146  1  2   31   54   109 0.217   0.88
 7.01 Intr - 217538 217514   25  2  1   99  121    35 0.370   4.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_1|444_aa
VRERRAVAAASAAEKPLFPLLGRRVCADKMADGELNVDSLITRLLEGECAPGRGTEGGRA
PPPTPASPSAAGTRGDPFPAPRRVSGSAARRTNRGGGEEALGAGERPLGARSGEIGGEGA
VPADPRGPGPPAEGLRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGD
IHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSME
QIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLI
CRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK
YQYGGLNSGRPVTPPRTANPPKKR

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_1|1335_bp
gtgagagaacgccgagccgtcgccgcagcctccgccgccgagaagcccttgttcccgctg
ctgggaaggagagtctgtgccgacaagatggcggacggggagctgaacgtggacagcctc
atcacccggctgctggagggtgagtgcgcgcctggccgcgggacagagggaggtcgggca
ccgccgccgacccctgcgtccccgtctgccgccggaacgcgaggggacccctttcccgcc
ccgagacgagtctctgggagcgcggcgcggcggacgaaccgaggagggggcgaggaggct
ctgggcgcgggggagcggcctctgggagcgcggtcaggggagatcgggggagagggggcc
gttcccgcggaccctcgggggccaggcccgccggccgaaggcttacgaggatgtcgtcca
ggaaagattgtgcagatgactgaagcagaagttcgaggcttatgtatcaagtctcgggag
atctttctcagccagcctattcttttggaattggaagcaccgctgaaaatttgtggagat
attcatggacaatatacagatttactgagattatttgaatatggaggtttcccaccagaa
gccaactatcttttcttaggagattatgtggacagaggaaagcagtctttggaaaccatt
tgtttgctattggcttataaaatcaaatatccagagaacttctttctcttaagaggaaac
catgagtgtgctagcatcaatcgcatttatggattctatgatgaatgcaaacgaagattt
aatattaaattgtggaagaccttcactgattgttttaactgtctgcctatagcagccatt
gtggatgagaagatcttctgttgtcatggaggattgtcaccagacctgcaatctatggag
cagattcggagaattatgagacctactgatgtccctgatacaggtttgctctgtgatttg
ctatggtctgatccagataaggatgtgcaaggctggggagaaaatgatcgtggtgtttcc
tttacttttggagctgatgtagtcagtaaatttctgaatcgtcatgatttagatttgatt
tgtcgagctcatcaggtggtggaagatggatatgaattttttgctaaacgacagttggta
accttattttcagccccaaattactgtggcgagtttgataatgctggtggaatgatgagt
gtggatgaaactttgatgtgttcatttcagatattgaaaccatctgaaaagaaagctaaa
taccagtatggtggactgaattctggacgtcctgtcactccacctcgaacagctaatccg
ccgaagaaaaggtga

>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_2|224_aa
MSYGPGTETQQLRSQNSGADDLGDKKRCLMGHKEVGFIKKTPQISIPPTIKAAGTRGDGS
ACPGPSLRADGRASGAASGIGPARPSPGTFTRYAAGRRAAKAPTCAATASLARSLSPEPA
AGSACVVAAKAAEGAHGRRREDEAGALPSHLRRAVGSPASEPRDRAHSKLEIRLRGPFPG
ASTGTCGSPGLRGRGPGNGGQGSVAALLASDGCSSVASQQRYPL

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_2|675_bp
atgagctacgggcctggtactgagacacagcagctcagatctcaaaattctggggcagac
gatcttggggacaaaaagaggtgtttaatgggacataaggaggtaggatttatcaaaaag
accccccaaatctccattcctcccacaataaaggcggcaggcacacgtggagacgggagc
gcctgcccagggccctccctccgagcagacggccgagcttcgggagcagcctccggtatc
ggccctgcccgtccttcccctggaaccttcacccgctacgccgccgggcggagggcggcc
aaagccccaacctgcgcggccactgcctccctcgccaggtccctcagcccagagcccgct
gcggggagcgcgtgtgtcgtcgccgcgaaggcagctgagggcgcccacgggaggcggcgt
gaggacgaggctggagcgctgccttctcatctaaggcgggcggtggggtcgccggcgagc
gaacccagggaccgggcacactcgaaactggagattcgcctgcgaggccccttcccgggg
gcgagcacaggtacctgcggaagcccggggctgcgcgggagagggccgggcaacggcggt
caaggctccgtcgcagcgctcctggcctcagacggttgctcgtcggtcgctagccagcag
cggtacccgctctaa

>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_3|169_aa
MSGRYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCE
EVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRLGLS
SSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEGYTNSFTGI

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_3|510_bp
atgagtggaaggtatctggctaatacagttgaagaagatgaagaagaaaccaagtacgaa
atttttccatgggctttagggaaaaactggagaaaattgttccctaatttcttaaagtta
agggaccagctctgggatagaattgactatagggctattgtaagcaggcgatgttgtgag
gaggttatggccattgcaccaacccattatatctggcaaagagaacgttctgttcatcac
agtggagctgtcagaaactacaacagagatgaagttcagctgccccggggacctagtgcc
acaccagtagattgttcactctgtggtaaaaaaagaagatatgttagactgggattgtct
tcatcatcatctttatccagtcatacagcaggggtgacagaaaaacattctcaggactca
tacaactcactgtcaatggacataataggtgatccttctcaagcttatactggttctgaa
ggatacaccaattccttcacgggcatatga

>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_4|527_aa
MFEKVLNFSEFGFAVSSNTAVNPRGEVLQNPDSSLAATGDKVKKQEKSRRSRGAVEPHAA
AEPSGCCAMRATGKEGVALGLRHSSATAPSRNTMLMAWCRGPVLLCLRQGLGTNSFLHGL
GQEPFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCLSSLEN
LRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSR
ERPFQAGELILAETGEGETKFKKLFRLNNFGLLNSNWGAVPFGKIVGKFPGQILRSSFGK
QYMLRRPALEDYVVLMKRGTAITFPKSVEKLSSTKRVPSAQKDINMILSMMDINPGDTVL
EAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD
FIHKDISGATEDIKSLTFDAVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGIL
AQKVESKINTDVQLDSQEKIGVKGELFQEDDHGELQFYFMHAVMNGE

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_4|1584_bp
atgtttgagaaggttttaaacttctctgaatttggatttgcagtttctagtaacacagca
gtaaatcctagaggagaagttctacagaatccagattcaagtttagcagcaactggggat
aaagtgaaaaagcaggagaaaagcaggcgcagtcgcggagctgtagagccccacgcagct
gcagagccatcgggctgctgcgccatgcgcgcgactgggaaagaaggggtcgcgctaggc
ttgcgtcactcgtctgcgacggcgccttcgcgaaacactatgctaatggcatggtgccgc
ggtcctgtcttgctgtgcctgcggcaggggctcggaaccaattcattcctgcacggcctg
gggcaggagcccttcgagggagctcggtcactgtgttgcaggtcctcgcctagagacctg
cgagatggagaaagagagcacgaggcggcacaaaggaaagccccaggagcagagtcttgc
ccatctctccctctgagcatctcggacattgggactggatgtctttcgtcactggaaaac
ctcagactgccgacgctgcgggaagagtcatcccctcgagagctcgaggactcgagcgga
gaccagggccggtgcggtcccacacaccagggatccgaggatccttcgatgctctcgcag
gcccagtccgctaccgaggtcgaagagcgtcacgtctccccttcttgttcaacttccaga
gagagaccctttcaggctggggaactgattttagctgagactggggagggagaaacaaaa
tttaagaaattatttaggttgaacaacttcggactcttaaatagtaactggggggcagtc
ccgttcggcaagatcgtggggaagttccccggccagatactgaggagttccttcggtaag
cagtacatgctgaggaggccagccttggaagactatgtagtattgatgaaaagagggact
gccataacattcccaaagtctgtggaaaaactgtcttccacgaaacgggtccctagtgcc
caaaaggatattaatatgattctctcaatgatggatatcaacccaggtgatactgttttg
gaagctggctcaggctctggtggaatgagcttatttttatccaaagcagttggatcacaa
ggacgagtcataagttttgaggtacgaaaagaccaccatgatctggctaagaagaattac
aaacactggcgtgattcatggaaattaagtcatgtagaagagtggccagacaatgtggat
tttattcataaggacatttcaggagcaaccgaagacataaaatctttaacatttgacgca
gttattgaacttttagatggaattcgcacctgtgaacttgctctttcatgtgaaaagata
agcgaggtcattgtcagagattggttggtttgccttgcaaaacagaaaaatggaatttta
gctcaaaaagtagaatctaaaatcaacacagatgtacaactagattctcaagagaaaatt
ggagttaaaggtgagctgtttcaagaggatgaccatggtgagcttcagttttactttatg
catgcagtaatgaatggagaatga

>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_5|639_aa
MAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGH
LRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLL
ALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQT
CKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFT
TIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTL
SENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILA
AGFCSDKMSLLLVYGSWFQPTIERVVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQTEQVE
SKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNKVLQTRN
VNLIKKTVLRMPLHTIIPLLQELPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQ
VTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE
EDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_5|1920_bp
atggctccgccccgcgccggtgcgcctgcgcacggacgaacacgtggctgcagcggggcc
agagcagcaatggcggcgggcggcggcggtagctgcgaccccctggcccctgctggggtc
ccttgcgccttctccccgcacagccaggcctacttcgctttggcctctaccgacggtcac
ttacgagtatgggagacggccaacaaccggctgcaccaggagtacgtgccttccgcgcac
ctcagtggtacctgcacctgtctggcctgggcgccagcgcggctgcaggccaaggaaagt
ccccagaggaaaaaaaggaaatcagaagctgtaggaatgagtaaccagactgacttattg
gctcttggcacagcagttggtagcattttattatacagcacagtaaaaggagagttacac
agtaaattaataagtggtggacatgacaacagagtcaactgcatacagtggcatcaagac
agtggctgtttatatagttgttcagatgataaacatattgtggaatggaacgtacagaca
tgcaaagtaaagtgcaaatggaaaggcgacaatagcagtgtcagttccctatgtatcagc
ccagatggaaagatgttgctttcagctggtcgaacaatcaaactatgggttttggagacc
aaagaagtctacaggcatttcacaggacatgcaacgccagtttcgtcactgatgttcact
accatcagacctcctaatgagagccagccctttgatggaattacaggtctttatttctta
tctggagcagtacatgaccggttacttaatgtctggcaggtccgatcagaaaacaaagaa
aagagtgcagtgatgtcatttacagttaccgatgaacctgtctatattgacttaactttg
tcagaaaacaaagaagagcctgtcaagttggctgttgtttgcagagatggtcaagtccat
ctttttgaacacatattaaatgggtactgcaaaaagcctttgacttcaaactgcacaatt
cagatagcaacacctgggaaaggcaagaagtcaacaccaaaacccatccctattctagct
gctggtttttgctcagacaaaatgtcattgttgcttgtatatggcagttggtttcagcct
actattgagcgagtggtgaggacaccagtgatgaattctgaagcaaaagttctggtgcct
gggattcctggtcatcatgcagctatcaagcccgctcctccacaaaccgagcaagtagag
agcaagaggaagtcagggggaaatgaggttagcattgaagaacgtctgggagcaatggat
atagacacacacaaaaaaggaaaggaagacctccagacgaatagctttccagttcttctt
acccagggcttagaaagtaacgattttgaaatgctaaataaagtacttcaaactaggaat
gtaaaccttataaagaagactgtattaaggatgcccctgcatactattattccgttgtta
caagagttgcctgacctggtaccccagctggggacactctaccagttaatggaaagcaga
gtcaaaacttttcagaaactttcacaccttcatggaaagcttattcttctaattacacaa
gtaacagcatcagagaagacaaagggagcaacttcccctggacagaaggcaaagttggtg
tatgaagaagagtcttctgaagaggagtctgatgatgaaatagcagataaggattctgaa
gataattgggatgaagatgaggaggagagtgaaagtgaaaaagatgaggacgttgaagag
gaagatgaggatgccgaaggaaaagatgaagaaaatggcgaggacagagatacagcaagt
gaaaaagaattaaatggagattctgatttagatcctgaaaatgaaagtgaagaagaatga

>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_6|145_aa
MRSRSSVTGLAGVIQTEDARCGQSMGWVVLRLRMVLADSVFDAISQSRIANQPSKRNCVC
MLYLFATSNIPLSGAGCSRWVVTLLCTQESCIINQFHNWKIAFGPECGTGVVLLPADHSP
FVNRNCKQTVDWLEFGCFESPQAPT

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_6|438_bp
atgagaagccgtagcagtgtaacaggattagcaggcgtcattcagactgaggacgcccgg
tgtggacaaagcatggggtgggtagtgcttcgtcttcgcatggtgctggctgactctgta
tttgatgcaatttcacagagtcgaattgctaaccagccttccaagagaaattgtgtttgc
atgttgtatttatttgcgacaagtaacattcctctcagtggagcaggatgttctcgttgg
gtggtgacccttctttgtactcaggagagttgcataataaaccagtttcataactggaag
attgcgtttggaccagagtgtggaactggggtcgtcttactgcctgctgaccactctcct
tttgtcaacaggaattgtaaacaaacagttgactggctggaatttggatgttttgagtct
cctcaggcacccacttag

>gi568815596r:28750202_28970277|GENSCAN_predicted_peptide_7|135_aa
MRKLTLVEGHEGETSIQASYAQQLCQTKELLQLLLTAGHFFGLASVARWGVWSGPGRVHV
ACDQNSTSPYPPEKDAGTGAHKAGTRSPQLHFTEKQEAPQASIDQGMAAVVLRSAAVTQQ
QQQHHVGRILWPPSG

>gi568815596r:28750202_28970277|GENSCAN_predicted_CDS_7|408_bp
atgaggaaattgacactcgtggaaggacatgagggggaaacatcaattcaagcttcctat
gctcagcaactgtgtcagactaaagagctgctgcagcttctcttgacagctgggcacttt
ttcgggttagcatctgtagcccggtggggagtttggtcaggtccagggagggtacatgta
gcctgtgaccagaattccacctctccttacccacctgagaaagatgctggcacaggtgca
cataaggcaggcacgaggtcgccgcaacttcactttactgagaaacaggaagcaccccaa
gcatctatcgatcagggaatggcagcagtggttctccgaagcgcagccgtaacacagcag
cagcagcagcatcacgtgggacgcattctttggcccccatctggctga