GENSCAN 1.0	Date run:  6-Nov-116	Time: 18:36:02

Sequence gi568815596f:28716015_28949938 : 233924 bp : 40.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2539   2691  153  1  0   71   27   119 0.022   2.37
 1.02 Intr +   5734   5836  103  1  1   89   65    24 0.006  -0.54
 1.03 Intr +  12734  12802   69  1  0   77  113    17 0.016   1.56
 1.04 Intr +  36024  36426  403  2  1   32    2   367 0.003  15.58
 1.05 Intr +  60837  60968  132  1  0   52   68    92 0.655   3.30
 1.06 Intr +  62795  63025  231  0  0  109  101   129 0.997  13.12
 1.07 Intr +  65724  65828  105  1  0  110   59    42 0.869   2.77
 1.08 Intr +  67893  67964   72  1  0   77  111   106 0.999  10.26
 1.09 Intr +  72644  72795  152  0  2   90   80    70 0.889   5.36
 1.10 Intr +  77849  77983  135  1  0  104   80   149 0.999  15.54
 1.11 Term +  83185  83289  105  0  0   34   49   183 0.821   6.43
 1.12 PlyA +  85235  85240    6                               1.05

 2.02 PlyA -  86149  86144    6                               1.05
 2.01 Sngl -  95487  94813  675  0  0   56   45   308 0.999  19.23
 2.00 Prom -  99939  99900   40                              -4.35

 3.00 Prom + 101559 101598   40                              -2.45
 3.01 Init + 104747 104757   11  1  2   37   77    10 0.086  -5.25
 3.02 Intr + 113134 113305  172  1  1   53   94   104 0.378   6.52
 3.03 Intr + 124158 124455  298  2  1   50   86   215 0.440  13.02
 3.04 Term + 132296 132324   29  0  2   77   54    36 0.066  -3.64
 3.05 PlyA + 132635 132640    6                               1.05

 4.07 PlyA - 133831 133826    6                               1.05
 4.06 Term - 135274 135011  264  1  0   14   44   205 0.234   3.22
 4.05 Intr - 145294 145104  191  2  2   18   92   101 0.870   1.88
 4.04 Intr - 149105 149003  103  2  1   74  110    72 0.860   6.83
 4.03 Intr - 150378 150331   48  0  0   60   53    89 0.498   0.56
 4.02 Intr - 154396 153565  832  0  1   73   90   427 0.724  31.87
 4.01 Init - 159441 159296  146  0  2   35   80   184 0.895  11.94
 4.00 Prom - 168718 168679   40                              -7.15

 5.00 Prom + 173813 173852   40                              -9.25
 5.01 Init + 176703 176705    3  2  0  113   22     0 0.184  -4.05
 5.02 Intr + 178619 178909  291  1  0  113   98   347 0.880  34.61
 5.03 Intr + 185973 186110  138  2  0  127   92    60 0.994  10.04
 5.04 Intr + 190446 190567  122  2  2  106   89    65 0.765   6.77
 5.05 Intr + 196576 196696  121  1  1   32   84    83 0.670   1.88
 5.06 Intr + 198055 198194  140  0  2   78   84   156 0.989  12.54
 5.07 Intr + 201879 201981  103  0  1   76   84    47 0.564   2.36
 5.08 Intr + 206905 206969   65  0  2   71  106    14 0.571  -1.90
 5.09 Intr + 208968 209139  172  0  1  117   76    82 0.991   8.92
 5.10 Intr + 211555 211686  132  0  0   80   80   104 0.990   8.72
 5.11 Intr + 213565 213696  132  0  0  100  101   101 0.998  12.52
 5.12 Intr + 219507 219593   87  2  0  111   78    23 0.801   2.85
 5.13 Intr + 225447 225560  114  2  0   69   89    39 0.728   1.82
 5.14 Intr + 226298 226367   70  1  1   93   98    83 0.991   7.64
 5.15 Intr + 230436 230485   50  1  2  103   81   111 0.890   9.38
 5.16 Term + 230586 230765  180  2  0   60   49   477 0.999  37.63
 5.17 PlyA + 230957 230962    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:28716015_28949938|GENSCAN_predicted_peptide_1|553_aa
XGVKSGNWGPVTRRGKARFMEDWGDKWTDGNTQRRTLMQSHVHKATAGAFSKEYECNRFL
HYQVSLARNAEDPFSSFSVFQLRVLEKKFADPWTRVSTSYPLGSFGFLKVRERRAVAAAS
AAEKPLFPLLGRRVCADKMADGELNVDSLITRLLEGECAPGRGTEGGRAPPPTPASPSAA
GTRGDPFPAPRRVSGSAARRTNRGGGEEALGAGERPLGARSGEIGGEGAVPADPRGPGPP
AEGLRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRL
FEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYG
FYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDV
PDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGY
EFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRP
VTPPRTANPPKKR

>gi568815596f:28716015_28949938|GENSCAN_predicted_CDS_1|1662_bp
nnaggtgtgaagagtgggaactggggaccagtaactcggagaggcaaggccaggttcatg
gaagactggggggacaaatggactgatggcaacacacaaagacgcacacttatgcagtca
catgtgcacaaagcgacagcaggcgccttttcaaaagaatatgaatgcaatagattcttg
cattaccaagtatcattggctaggaatgctgaggatcccttttccagcttctctgttttc
caactccgagttctggagaaaaagtttgctgacccatggactagagtatccacatcttat
ccactggggtcttttgggttcttgaaggtgagagaacgccgagccgtcgccgcagcctcc
gccgccgagaagcccttgttcccgctgctgggaaggagagtctgtgccgacaagatggcg
gacggggagctgaacgtggacagcctcatcacccggctgctggagggtgagtgcgcgcct
ggccgcgggacagagggaggtcgggcaccgccgccgacccctgcgtccccgtctgccgcc
ggaacgcgaggggacccctttcccgccccgagacgagtctctgggagcgcggcgcggcgg
acgaaccgaggagggggcgaggaggctctgggcgcgggggagcggcctctgggagcgcgg
tcaggggagatcgggggagagggggccgttcccgcggaccctcgggggccaggcccgccg
gccgaaggcttacgaggatgtcgtccaggaaagattgtgcagatgactgaagcagaagtt
cgaggcttatgtatcaagtctcgggagatctttctcagccagcctattcttttggaattg
gaagcaccgctgaaaatttgtggagatattcatggacaatatacagatttactgagatta
tttgaatatggaggtttcccaccagaagccaactatcttttcttaggagattatgtggac
agaggaaagcagtctttggaaaccatttgtttgctattggcttataaaatcaaatatcca
gagaacttctttctcttaagaggaaaccatgagtgtgctagcatcaatcgcatttatgga
ttctatgatgaatgcaaacgaagatttaatattaaattgtggaagaccttcactgattgt
tttaactgtctgcctatagcagccattgtggatgagaagatcttctgttgtcatggagga
ttgtcaccagacctgcaatctatggagcagattcggagaattatgagacctactgatgtc
cctgatacaggtttgctctgtgatttgctatggtctgatccagataaggatgtgcaaggc
tggggagaaaatgatcgtggtgtttcctttacttttggagctgatgtagtcagtaaattt
ctgaatcgtcatgatttagatttgatttgtcgagctcatcaggtggtggaagatggatat
gaattttttgctaaacgacagttggtaaccttattttcagccccaaattactgtggcgag
tttgataatgctggtggaatgatgagtgtggatgaaactttgatgtgttcatttcagata
ttgaaaccatctgaaaagaaagctaaataccagtatggtggactgaattctggacgtcct
gtcactccacctcgaacagctaatccgccgaagaaaaggtga

>gi568815596f:28716015_28949938|GENSCAN_predicted_peptide_2|224_aa
MSYGPGTETQQLRSQNSGADDLGDKKRCLMGHKEVGFIKKTPQISIPPTIKAAGTRGDGS
ACPGPSLRADGRASGAASGIGPARPSPGTFTRYAAGRRAAKAPTCAATASLARSLSPEPA
AGSACVVAAKAAEGAHGRRREDEAGALPSHLRRAVGSPASEPRDRAHSKLEIRLRGPFPG
ASTGTCGSPGLRGRGPGNGGQGSVAALLASDGCSSVASQQRYPL

>gi568815596f:28716015_28949938|GENSCAN_predicted_CDS_2|675_bp
atgagctacgggcctggtactgagacacagcagctcagatctcaaaattctggggcagac
gatcttggggacaaaaagaggtgtttaatgggacataaggaggtaggatttatcaaaaag
accccccaaatctccattcctcccacaataaaggcggcaggcacacgtggagacgggagc
gcctgcccagggccctccctccgagcagacggccgagcttcgggagcagcctccggtatc
ggccctgcccgtccttcccctggaaccttcacccgctacgccgccgggcggagggcggcc
aaagccccaacctgcgcggccactgcctccctcgccaggtccctcagcccagagcccgct
gcggggagcgcgtgtgtcgtcgccgcgaaggcagctgagggcgcccacgggaggcggcgt
gaggacgaggctggagcgctgccttctcatctaaggcgggcggtggggtcgccggcgagc
gaacccagggaccgggcacactcgaaactggagattcgcctgcgaggccccttcccgggg
gcgagcacaggtacctgcggaagcccggggctgcgcgggagagggccgggcaacggcggt
caaggctccgtcgcagcgctcctggcctcagacggttgctcgtcggtcgctagccagcag
cggtacccgctctaa

>gi568815596f:28716015_28949938|GENSCAN_predicted_peptide_3|169_aa
MSGRYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCE
EVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRLGLS
SSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEGYTNSFTGI

>gi568815596f:28716015_28949938|GENSCAN_predicted_CDS_3|510_bp
atgagtggaaggtatctggctaatacagttgaagaagatgaagaagaaaccaagtacgaa
atttttccatgggctttagggaaaaactggagaaaattgttccctaatttcttaaagtta
agggaccagctctgggatagaattgactatagggctattgtaagcaggcgatgttgtgag
gaggttatggccattgcaccaacccattatatctggcaaagagaacgttctgttcatcac
agtggagctgtcagaaactacaacagagatgaagttcagctgccccggggacctagtgcc
acaccagtagattgttcactctgtggtaaaaaaagaagatatgttagactgggattgtct
tcatcatcatctttatccagtcatacagcaggggtgacagaaaaacattctcaggactca
tacaactcactgtcaatggacataataggtgatccttctcaagcttatactggttctgaa
ggatacaccaattccttcacgggcatatga

>gi568815596f:28716015_28949938|GENSCAN_predicted_peptide_4|527_aa
MFEKVLNFSEFGFAVSSNTAVNPRGEVLQNPDSSLAATGDKVKKQEKSRRSRGAVEPHAA
AEPSGCCAMRATGKEGVALGLRHSSATAPSRNTMLMAWCRGPVLLCLRQGLGTNSFLHGL
GQEPFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCLSSLEN
LRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSR
ERPFQAGELILAETGEGETKFKKLFRLNNFGLLNSNWGAVPFGKIVGKFPGQILRSSFGK
QYMLRRPALEDYVVLMKRGTAITFPKSVEKLSSTKRVPSAQKDINMILSMMDINPGDTVL
EAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD
FIHKDISGATEDIKSLTFDAVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGIL
AQKVESKINTDVQLDSQEKIGVKGELFQEDDHGELQFYFMHAVMNGE

>gi568815596f:28716015_28949938|GENSCAN_predicted_CDS_4|1584_bp
atgtttgagaaggttttaaacttctctgaatttggatttgcagtttctagtaacacagca
gtaaatcctagaggagaagttctacagaatccagattcaagtttagcagcaactggggat
aaagtgaaaaagcaggagaaaagcaggcgcagtcgcggagctgtagagccccacgcagct
gcagagccatcgggctgctgcgccatgcgcgcgactgggaaagaaggggtcgcgctaggc
ttgcgtcactcgtctgcgacggcgccttcgcgaaacactatgctaatggcatggtgccgc
ggtcctgtcttgctgtgcctgcggcaggggctcggaaccaattcattcctgcacggcctg
gggcaggagcccttcgagggagctcggtcactgtgttgcaggtcctcgcctagagacctg
cgagatggagaaagagagcacgaggcggcacaaaggaaagccccaggagcagagtcttgc
ccatctctccctctgagcatctcggacattgggactggatgtctttcgtcactggaaaac
ctcagactgccgacgctgcgggaagagtcatcccctcgagagctcgaggactcgagcgga
gaccagggccggtgcggtcccacacaccagggatccgaggatccttcgatgctctcgcag
gcccagtccgctaccgaggtcgaagagcgtcacgtctccccttcttgttcaacttccaga
gagagaccctttcaggctggggaactgattttagctgagactggggagggagaaacaaaa
tttaagaaattatttaggttgaacaacttcggactcttaaatagtaactggggggcagtc
ccgttcggcaagatcgtggggaagttccccggccagatactgaggagttccttcggtaag
cagtacatgctgaggaggccagccttggaagactatgtagtattgatgaaaagagggact
gccataacattcccaaagtctgtggaaaaactgtcttccacgaaacgggtccctagtgcc
caaaaggatattaatatgattctctcaatgatggatatcaacccaggtgatactgttttg
gaagctggctcaggctctggtggaatgagcttatttttatccaaagcagttggatcacaa
ggacgagtcataagttttgaggtacgaaaagaccaccatgatctggctaagaagaattac
aaacactggcgtgattcatggaaattaagtcatgtagaagagtggccagacaatgtggat
tttattcataaggacatttcaggagcaaccgaagacataaaatctttaacatttgacgca
gttattgaacttttagatggaattcgcacctgtgaacttgctctttcatgtgaaaagata
agcgaggtcattgtcagagattggttggtttgccttgcaaaacagaaaaatggaatttta
gctcaaaaagtagaatctaaaatcaacacagatgtacaactagattctcaagagaaaatt
ggagttaaaggtgagctgtttcaagaggatgaccatggtgagcttcagttttactttatg
catgcagtaatgaatggagaatga

>gi568815596f:28716015_28949938|GENSCAN_predicted_peptide_5|639_aa
MAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGH
LRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLL
ALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQT
CKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFT
TIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTL
SENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILA
AGFCSDKMSLLLVYGSWFQPTIERVVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQTEQVE
SKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNKVLQTRN
VNLIKKTVLRMPLHTIIPLLQELPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQ
VTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEE
EDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE

>gi568815596f:28716015_28949938|GENSCAN_predicted_CDS_5|1920_bp
atggctccgccccgcgccggtgcgcctgcgcacggacgaacacgtggctgcagcggggcc
agagcagcaatggcggcgggcggcggcggtagctgcgaccccctggcccctgctggggtc
ccttgcgccttctccccgcacagccaggcctacttcgctttggcctctaccgacggtcac
ttacgagtatgggagacggccaacaaccggctgcaccaggagtacgtgccttccgcgcac
ctcagtggtacctgcacctgtctggcctgggcgccagcgcggctgcaggccaaggaaagt
ccccagaggaaaaaaaggaaatcagaagctgtaggaatgagtaaccagactgacttattg
gctcttggcacagcagttggtagcattttattatacagcacagtaaaaggagagttacac
agtaaattaataagtggtggacatgacaacagagtcaactgcatacagtggcatcaagac
agtggctgtttatatagttgttcagatgataaacatattgtggaatggaacgtacagaca
tgcaaagtaaagtgcaaatggaaaggcgacaatagcagtgtcagttccctatgtatcagc
ccagatggaaagatgttgctttcagctggtcgaacaatcaaactatgggttttggagacc
aaagaagtctacaggcatttcacaggacatgcaacgccagtttcgtcactgatgttcact
accatcagacctcctaatgagagccagccctttgatggaattacaggtctttatttctta
tctggagcagtacatgaccggttacttaatgtctggcaggtccgatcagaaaacaaagaa
aagagtgcagtgatgtcatttacagttaccgatgaacctgtctatattgacttaactttg
tcagaaaacaaagaagagcctgtcaagttggctgttgtttgcagagatggtcaagtccat
ctttttgaacacatattaaatgggtactgcaaaaagcctttgacttcaaactgcacaatt
cagatagcaacacctgggaaaggcaagaagtcaacaccaaaacccatccctattctagct
gctggtttttgctcagacaaaatgtcattgttgcttgtatatggcagttggtttcagcct
actattgagcgagtggtgaggacaccagtgatgaattctgaagcaaaagttctggtgcct
gggattcctggtcatcatgcagctatcaagcccgctcctccacaaaccgagcaagtagag
agcaagaggaagtcagggggaaatgaggttagcattgaagaacgtctgggagcaatggat
atagacacacacaaaaaaggaaaggaagacctccagacgaatagctttccagttcttctt
acccagggcttagaaagtaacgattttgaaatgctaaataaagtacttcaaactaggaat
gtaaaccttataaagaagactgtattaaggatgcccctgcatactattattccgttgtta
caagagttgcctgacctggtaccccagctggggacactctaccagttaatggaaagcaga
gtcaaaacttttcagaaactttcacaccttcatggaaagcttattcttctaattacacaa
gtaacagcatcagagaagacaaagggagcaacttcccctggacagaaggcaaagttggtg
tatgaagaagagtcttctgaagaggagtctgatgatgaaatagcagataaggattctgaa
gataattgggatgaagatgaggaggagagtgaaagtgaaaaagatgaggacgttgaagag
gaagatgaggatgccgaaggaaaagatgaagaaaatggcgaggacagagatacagcaagt
gaaaaagaattaaatggagattctgatttagatcctgaaaatgaaagtgaagaagaatga