GENSCAN 1.0	Date run:  6-Nov-116	Time: 18:38:08

Sequence gi568815597f:236042623_236308155 : 265533 bp : 43.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   6367   6068  300  1  0   83  121   181 0.969  17.83
 1.01 Init -  22457  22233  225  2  0   76   83   545 0.003  49.27
 1.00 Prom -  28435  28396   40                              -1.06

 2.00 Prom +  35508  35547   40                              -5.66
 2.01 Init +  37252  37347   96  0  0   58  107    64 0.823   5.61
 2.02 Intr +  45894  45992   99  2  0  109   73    -5 0.079   0.41
 2.03 Intr +  58320  58428  109  2  1   93   81    56 0.656   5.26
 2.04 Intr +  58941  58985   45  1  0   50   92    73 0.474   2.28
 2.05 Intr +  62192  62293  102  0  0   51   94    45 0.276   1.55
 2.06 Intr +  67431  67746  316  1  1   35   -3   392 0.074  19.92
 2.07 Intr +  68277  68557  281  0  2    9   42   288 0.244  13.42
 2.08 Term +  68603  69750 1148  0  2   15   55  1930 0.852 174.49
 2.09 PlyA +  70127  70132    6                              -0.45

 3.00 Prom +  72573  72612   40                              -4.56
 3.01 Init +  78496  78588   93  0  0   77   21    81 0.190   0.68
 3.02 Intr +  84458  84754  297  1  0   50   52   113 0.351   0.97
 3.03 Term +  86852  87172  321  1  0  134   44   125 0.388   7.52
 3.04 PlyA +  87751  87756    6                               1.05

 4.00 Prom +  96729  96768   40                              -5.56
 4.01 Init + 100001 100414  414  1  0   73  109   883 0.916  83.37
 4.02 Intr + 100618 100760  143  0  2   13   75   110 0.539   1.35
 4.03 Term + 100942 101050  109  1  1   15   49   116 0.690  -1.62
 4.04 PlyA + 101499 101504    6                              -0.45

 5.03 PlyA - 103071 103066    6                               1.05
 5.02 Term - 107893 107741  153  1  0   61   49   144 0.111   5.72
 5.01 Init - 113623 113549   75  1  0   76   44   149 0.374   8.39
 5.00 Prom - 114975 114936   40                              -6.06

 6.03 PlyA - 115502 115497    6                               1.05
 6.02 Term - 117257 117145  113  0  2   82   45    78 0.035   1.62
 6.01 Init - 130949 130877   73  2  1   77   55   113 0.413   8.13
 6.00 Prom - 131973 131934   40                              -2.46

 7.00 Prom + 132929 132968   40                              -4.16
 7.01 Init + 135781 136014  234  0  0   48  100   186 0.541  11.96
 7.02 Intr + 137257 137406  150  0  0  117   82   214 0.967  24.06
 7.03 Intr + 141156 141284  129  2  0  125   89   -34 0.163   1.29
 7.04 Intr + 162504 162628  125  2  2   86   90    85 0.800   7.88
 7.05 Term + 164188 164200   13  1  1  113   53     3 0.488  -3.03
 7.06 PlyA + 169093 169098    6                               1.05

 8.08 PlyA - 172012 172007    6                               1.05
 8.07 Term - 175106 175061   46  1  1  112   43    31 0.589  -2.32
 8.06 Intr - 178343 178210  134  2  2   66  116    44 0.690   4.44
 8.05 Intr - 182517 182448   70  2  1   77   93    27 0.891   1.28
 8.04 Intr - 183893 183647  247  0  1  108   69   141 0.957  10.72
 8.03 Intr - 187628 187602   27  0  0  127   92    -4 0.759   1.99
 8.02 Intr - 238489 238459   31  1  1   74  111     1 0.122  -1.30
 8.01 Init - 239161 239060  102  1  0   84  115   226 0.961  23.14
 8.00 Prom - 249678 249639   40                              -3.06


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  21625  21519  107  2  2   67   45   100 0.947   2.17
S.002 Intr + 126084 126133   50  1  2  125  131   -36 0.873   2.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_1|175_aa
MLASSSRIRAAWTRALLLPLLLAGPVGCLSRQELFPFGPGQGDLELEDGDDFVSPALELS
GALRFYDRSDIDAVYVTTNGIIATSEPPAKESHPGLFPPTFGAVAPFLADLDTTDGLGKV
YYREDLSPSITQRAAECVHRGFPEISFQPSSAVVVTWESVAPYQGPSRDPDQKGK

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_1|525_bp
atgttggcctcgagcagccggatccgggctgcgtggacgcgggcgctgctgctgccgctg
ctgctggcggggcctgtgggctgcctgagccgccaggagctctttcccttcggccccgga
cagggggacctggagctggaggacggggatgacttcgtctctcctgccctggagctgagt
ggggcgctccgcttctacgacagatccgacatcgacgcagtctacgtcaccacaaatggc
atcattgctacgagtgaacccccggccaaagaatcccatcccgggctcttcccaccaaca
ttcggtgcagtcgcccctttcctggcggacttggacacgaccgatggcctggggaaggtt
tattatcgagaagacttatccccctccatcactcagcgagcagcagagtgtgtccacaga
gggttcccggagatctctttccagcctagtagcgcggtggttgtcacttgggaatccgtg
gccccctaccaagggcccagcagggacccagaccagaaaggcaag

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_2|731_aa
MYETVLPFLLGSKVVNVTNEVFEYSTPNLVFLASLQPRPWCTARNPSAPGAPLPIVTTEA
RVWNAKPGKAATLAQASDTARPRASHSPGPGKAEIKSRRWQGVFVGVVCVKVAVYVGCDR
DMNGEEGKGNGKGGRIVSKYFPRSRGRGLAVHKMAPYSPLVTRLQKALGVRQYHVASVLC
QRAKMAMSHFEPNEYIHYDLLEKNINIVCKRLNWPLTLLEKIVYGHLDDPASQEIEQGKT
PVAVAGPRGHAAVHQQNWGHHFRVPLQPQDEEVPKQDGRTDIANLADEFQDHLVPDPGCH
YDQLIEINLSELKPHINGPFTPDQAHPVAEVGKVAEKEGWPLDIRVGLTAVAKQALAHDF
KCKSHFTITPGSEQIHATIERDSYAQILRNVGGIVLANACGPCIGRWDTKDIKKGKKYTI
VTSYNRNFTGCNDANPETHVFVTSPEIVTALAIVGILKFNPETNYLMGKDRKKFKLEALD
ADDLPQEEFDPGQDPYQHPPQDSSGQHVDVSPTSQRLQLLEAFDKWDSKDLEDPQILIKV
KGKCTTDHISAAGPWLKFCGHLDNISNNLLTGAINIENSQANSVCSANIENTQEFGPVPD
TARYYKKHGIRWVVIGDENSSREHAVLEPPHLWGQAIITKSFARIHKTNPKKQGLLPLTF
ADPGDYNKVHPVDKLTIQGLKDFAPDKPLKCIIKHPNGTQETILLNHTFNEMRIKWFCAG
SALNRMKELQQ

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_2|2196_bp
atgtatgaaactgtgctgccatttttattaggttccaaggttgttaacgtcactaatgaa
gttttcgagtattctactcctaacctggttttcctggcgtctttgcaacctagaccctgg
tgcacagcccggaatcccagtgctcctggtgcgccattgccaatagtaaccacagaagct
agagtgtggaacgcaaaacctggcaaagcagccacattggcccaagccagcgacaccgcg
cggccccgcgcttcccacagccctgggcccggcaaggctgaaatcaagtctagaagatgg
caaggtgtgtttgtgggtgttgtatgtgtgaaggtggccgtgtatgtgggctgtgaccgg
gacatgaatggagaggaaggaaagggaaatggtaaagggggcaggattgtctccaagtac
ttccccaggtccaggggaagagggctggcagtgcacaaaatggctccctacagcccactg
gtgacccggctgcagaaagctctgggtgtgcggcaataccatgtggcctcagtcctgtgc
caacgggccaagatggcgatgagccactttgagcccaatgagtacatccactatgacctg
ctagagaagaacattaacattgtttgcaaacgactgaactggcctctgaccctcttggag
aagatcgtgtatggacacctggatgacccggccagccaggaaatcgagcagggcaagaca
cctgtggctgtggccggaccacgtggccatgctgcagttcatcagcaaaattggggccac
cacttccgtgttcccttacaaccacaggatgaggaggtacctaagcaagacggccggaca
gacattgccaatctagctgatgaattccaggatcacttggtgcctgaccctggctgccat
tatgaccaactaattgaaattaacctcagtgagctgaagccgcacatcaatgggcccttc
acccccgaccaggctcaccctgtggcagaagtgggcaaggtggcagagaaggaaggatgg
cctctggacatccgagtaggtctgactgctgtggccaagcaggcactggcccatgacttc
aagtgcaagtcccacttcaccatcactccaggctccgagcagatccacgccaccattgag
cgggacagctacgcacagattttgaggaatgtgggtggcatcgtcctggccaatgcttgt
ggcccctgcattggccgctgggacacgaaggacatcaagaaggggaagaagtacacaatc
gtcacctcctacaacaggaacttcacgggctgcaatgatgcgaaccctgagacccatgtc
ttcgtcacgtccccagagattgtcacagccctggccattgtgggaatcctcaagttcaac
ccagagaccaactacctgatgggcaaagataggaagaagttcaagctagaggctctggat
gcagacgaccttccccaagaggagtttgacccagggcaggacccctaccagcacccccca
caggacagcagtggccagcacgtggatgtgagccccactagccagcgcctgcagctcctg
gaggcttttgacaagtgggatagcaaggacctggaggacccgcagatactcatcaaggtc
aaagggaagtgtactactgaccacatctcggctgctggcccctggctcaagttttgtggg
cacttggacaacatctccaacaacctgctcactggtgccatcaacattgaaaacagccag
gccaactccgtgtgcagtgccaacattgaaaacacccaggagtttggccccgtccctgac
actgcccgctactacaagaaacatggcatcaggtgggtggtgatcggggacgagaactcg
agccgggagcacgcagtgctggagcctccccacctctggggccaggccatcatcaccaag
agctttgccaggatccacaagaccaacccgaagaagcagggcctgctgcccctgactttt
gctgacccaggcgactacaacaaggttcaccctgtggacaagctgactattcagggcctg
aaggacttcgcccctgacaagcccctgaagtgcatcatcaagcaccccaatgggacccag
gagaccatcctcctgaaccacaccttcaatgagatgcggatcaagtggttctgtgccggc
agtgccctcaacagaatgaaggagctgcagcagtga

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_3|236_aa
MVTKQEAELVVAADTGNSPSFAPREMCHPYILAVVESRRIQTKIQPSQQVRVKMSLLEQH
LLEQNRTGCSLALGLAALAAGGPESRAWLHIEGHQPERAAGGTAVRKVISSRGHYYGRGI
GCCHPRLAEVCPDEKTQDGSRPKKAFACAVGTEVFLPSLSTKQSLCSAEQRKNANGALGV
AKFLGPQVLACILYGVAFVFPFCRLCLKYEDYLKLILCQDTDTTINWVMSVNSKTI

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_3|711_bp
atggttactaagcaggaggctgagctggtggttgcagctgacactggaaattcacccagc
ttcgccccccgggagatgtgccacccctacatccttgctgttgtggagtcaagaaggatc
cagaccaagatccaaccttcacagcaggtcagagttaaaatgtcattactcgagcagcac
ttactggagcagaacagaactggctgctcactggcccttggccttgctgcccttgctgcg
gggggaccagagtccagagcctggctgcatattgaaggacaccagccagaaagggcagca
gggggaactgcagttcgtaaggtcatcagctccaggggccactactatggccgtggaatt
ggctgttgtcatcccaggttggcggaagtgtgtccagatgagaagacacaggatggctct
cgtcccaagaaggccttcgcttgtgctgtgggcacagaggtctttctcccctctctgagc
acaaagcagtcactgtgctctgccgagcagaggaaaaatgcaaatggtgctctgggtgtg
gccaagttccttgggccccaagtgctggcctgcattctttatggggtagcctttgttttc
cctttctgcaggctgtgcctgaaatatgaagattacttaaaactcatactatgccaggac
acggacaccacaataaactgggtaatgagtgtcaactcaaagactatttaa

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_4|221_aa
MRPERPRPRGSAPGPMETPPWDPARNDSLPPTLTPAVPPYVKLGLTVVYTVFYALLFVFI
YVQLWLVLRYRHKRLSYQSVFLFLCLFWASLRTVLFSFYFKDFVAANSLSPFVFWLLYCF
PVCLQFFTLTLMNLYFTQGQGEGRGGLEAAAHSLPLAPHRAVDSGRFSVRSAKQQRLHTP
VSTDGRSSTELRLTNSFHRIAKQQAGVTPSSELLPLIRVTV

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_4|666_bp
atgaggcccgagcgtccccggccgcgcggcagcgcccccggcccgatggagaccccgccg
tgggacccagcccgcaacgactcgctgccgcccacgctgaccccggccgtgcccccctac
gtgaagcttggcctcaccgtcgtctacaccgtgttctacgcgctgctcttcgtgttcatc
tacgtgcagctctggctggtgctgcgttaccgccacaagcggctcagctaccagagcgtc
ttcctctttctctgcctcttctgggcctccctgcggaccgtcctcttctccttctacttc
aaagacttcgtggcggccaattcgctcagccccttcgtcttctggctgctctactgcttc
cctgtgtgcctgcagtttttcaccctcacgctgatgaacttgtacttcacgcaggggcaa
ggagaaggcaggggagggctggaggccgccgctcactcgctgcccctggctccgcatcgt
gcggtggattcggggcgcttctccgtgcgcagcgcgaagcagcagcgcctgcacacgcca
gttagtacggatggaaggagctctacagaactgcggcttactaactcattccaccggatt
gctaaacagcaggctggggtaacacccagctccgagctgctgccgctcatcagagttact
gtctga

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_5|75_aa
MWPKKLVLPAPGLVLALGMWAPQTSGITEALMRSQPQLQREEHAAMARGEGSGNWAVCLE
SGLREVLGVNGRPRK

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_5|228_bp
atgtggcccaagaagctggtcctgcctgctcctggcctcgtgctggcccttggaatgtgg
gccccccagacttcaggcatcaccgaggcactgatgcggtcacagcctcagctgcagaga
gaagagcacgctgccatggctcgaggagagggctcgggaaactgggctgtatgtttagaa
agtggcctgcgggaggtgctgggggtgaacggcagaccaagaaaataa

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_6|61_aa
MRRVFKAANTTVPDTSYCERTEARVGQGLLIPDLWATCAPLVTQAFTPSFRMTQEGLELC
M

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_6|186_bp
atgaggcgagtcttcaaggcagccaacacaacagtgcccgacacctcctactgtgagagg
acagaagcaagggtgggccaaggcctcctcatcccggacctgtgggcgacttgtgccccc
ttggtaacccaggccttcaccccatcctttcggatgacacaggaaggcctagagctctgc
atgtga

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_7|216_aa
MPSRLPLYLASLFISLVFLLVNLTCAVLVKTGNWERKVIVSVRVAINDTLFVLCAVSLSI
CLYKISKMSLANIYLESKGSSVCQVTAIGVTVILLYTSRACYNLFILSFSQNKSVHSFDY
DWYNVSDQADLKNQLGDAGYVLFGVVLFVWELLPTTLVVYFFRVRNPTKDLTNPGMVPSH
GFSPRSYFFDNPRRYDSDDDLAWNIAPQGLQGGLWL

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_7|651_bp
atgccttccaggttgcccctctacctggcctccctcttcatcagccttgttttcctgttg
gtgaatttaacctgtgctgtgctggtaaagacgggaaattgggagaggaaggttatcgtc
tctgtgcgagtggccattaatgacacgctcttcgtgctgtgtgccgtctctctctccatc
tgtctctacaaaatctctaagatgtccttagccaacatttacttggagtccaagggctcc
tccgtgtgtcaagtgactgccatcggtgtcaccgtgatactgctttacacctctcgggcc
tgctacaacctgttcatcctgtcattttctcagaacaagagcgtccattcctttgattat
gactggtacaatgtatcagaccaggcagatttgaagaatcagctgggagatgctggatac
gtattatttggagtggtgttatttgtttgggaactcttacctaccaccttagtcgtttat
ttcttccgagttagaaatcctacaaaggaccttaccaaccctggaatggtccccagccat
ggattcagtcccagatcttatttctttgacaaccctcgaagatatgacagtgatgatgac
cttgcctggaacattgcccctcagggacttcagggaggcctgtggctctga

>gi568815597f:236042623_236308155|GENSCAN_predicted_peptide_8|218_aa
MSQGVRRAGAGQGVAAAVQLLVTLSFLRSVVEAQLSCVCQVASPGESFYTWLEETWGKPS
WGPNIKEFKHRFDPVETKGEGPRRLKNLYFLYLIELRALSKVAPYFERSIVDLYTGNAEE
DADTKTLLLNIFQDTKSFPMHFDEKSMFAGDKKGAKSLKTQGLGTALKILFSEKEIQKLP
ENSPSKGFQLTRQEIVALLNAFGRNFRDKDILEIVSYF

>gi568815597f:236042623_236308155|GENSCAN_predicted_CDS_8|657_bp
atgagccaaggggtccgccgggcaggcgctgggcagggggtagcggccgcggtgcagctg
ctggtcaccctgagcttcctgcggagcgtcgtcgaggcgcagctgagctgtgtctgccaa
gtggcatcgccaggagaatcattctacacatggctagaagaaacctggggtaagcccagt
tggggacctaatattaaagaattcaaacaccgctttgaccctgtggaaaccaagggagaa
ggtccaagaaggctcaagaatctttactttttatacttgattgagcttcgagctttgtca
aaggtggctccatattttgagcgctcaattgtcgatctttacactggaaatgcagaagaa
gatgctgacacaaaaactcttctactgaatatctttcaagatacaaagtcctttcccatg
cactttgatgagaaatccatgtttgcaggtgacaaaaaaggggccaagtcactaaagact
cagggtttaggaactgccctgaagatattattctctgaaaaagaaatccaaaagcttcca
gagaatagtccatctaaaggcttccaactcacccgacaggaaatagttgctcttttaaat
gcttttggaagaaattttagggacaaagacattttggaaattgtcagttacttttag