GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:48:02

Sequence gi568815597f:231429252_231664902 : 235651 bp : 40.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -     32     27    6                              -0.45
 1.06 Term -    983    622  362  0  2  -33   42   313 0.634   8.31
 1.05 Intr -   2026   1845  182  0  2   89   63   100 0.004   6.19
 1.04 Intr -  12953  12916   38  2  2   68  101    65 0.004   1.94
 1.03 Intr -  17375  17206  170  0  2  124   23    88 0.012   4.64
 1.02 Intr -  43385  43269  117  0  0   65   54    88 0.009   2.62
 1.01 Init -  63912  63798  115  0  1   57   77   124 0.317   8.62
 1.00 Prom -  64009  63970   40                              -6.95

 2.04 PlyA -  64022  64017    6                               1.05
 2.03 Term -  70009  69796  214  0  1   10   37   174 0.540   0.22
 2.02 Intr -  70713  70050  664  1  1  -28   79   287 0.274   6.09
 2.01 Init -  70947  70740  208  0  1   60   57   113 0.364   4.43
 2.00 Prom -  73194  73155   40                              -3.15

 3.00 Prom +  81856  81895   40                              -1.85
 3.01 Init +  83018  83077   60  1  0   52   95    12 0.542  -0.40
 3.02 Intr +  83198  83282   85  1  1   98   58    60 0.084   2.47
 3.03 Intr +  87850  87967  118  2  1   43  106    40 0.017  -0.10
 3.04 Intr +  99007  99127  121  1  1    2   86   122 0.113   2.98
 3.05 Intr +  99154  99346  193  0  1    6   52   148 0.069   1.14
 3.06 Intr + 107962 108076  115  2  1   39  113    69 0.402   3.09
 3.07 Intr + 113230 113360  131  1  2   28  111   108 0.336   6.52
 3.08 Intr + 131877 132004  128  1  2   83   37    70 0.410   0.88
 3.09 Term + 135277 135654  378  0  0   75   39   271 0.959  14.70
 3.10 PlyA + 136951 136956    6                               1.05

 4.03 PlyA - 137174 137169    6                               1.05
 4.02 Term - 162549 162298  252  0  0   97   42   146 0.305   5.55
 4.01 Init - 167225 167091  135  2  0   54   77    97 0.831   5.48
 4.00 Prom - 168616 168577   40                              -7.15

 5.00 Prom + 169100 169139   40                              -5.95
 5.01 Init + 169603 169712  110  0  2   87   37    56 0.285   0.14
 5.02 Intr + 174577 174652   76  1  1   92   70   116 0.236   8.80
 5.03 Intr + 188728 188808   81  0  0   37  113    85 0.308   4.82
 5.04 Intr + 197530 197683  154  0  1  101   91    31 0.170   3.42
 5.05 Intr + 201786 201921  136  1  1   59  110     3 0.024  -1.69
 5.06 Intr + 202169 202265   97  2  1    9   70   141 0.092   3.49
 5.07 Intr + 211903 211987   85  0  1   36  101   101 0.851   4.67
 5.08 Intr + 212072 212119   48  0  0   66  101    53 0.693   2.13
 5.09 Intr + 212199 212441  243  1  0   36   84   243 0.647  15.25
 5.10 Intr + 212709 212897  189  1  0   77   48    75 0.353   1.04
 5.11 Intr + 215187 215318  132  1  0   64   91    69 0.441   4.50
 5.12 Term + 216390 216499  110  1  2   46   54    81 0.147  -1.81
 5.13 PlyA + 216742 216747    6                              -1.75

 6.02 PlyA - 216844 216839    6                               1.05
 6.01 Sngl - 217889 217311  579  2  0   71   32   202 0.590   8.82
 6.00 Prom - 217943 217904   40                              -9.85

 7.08 PlyA - 218060 218055    6                               1.05
 7.07 Term - 218840 218104  737  0  2   54   48   327 0.325  17.94
 7.06 Intr - 220989 220877  113  2  2    1   98    74 0.547  -1.20
 7.05 Intr - 221965 221795  171  0  0   23   86   113 0.294   2.74
 7.04 Intr - 224169 224054  116  0  2   79   86    80 0.385   5.23
 7.03 Intr - 227698 227533  166  0  1   58   35   123 0.297   3.04
 7.02 Intr - 232943 232812  132  1  0   27   92    76 0.013   0.74
 7.01 Intr - 233146 232961  186  0  0   54   72   109 0.299   3.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  46864  46697  168  1  0   92   48   160 0.802   6.91
S.002 Term +  93948  94052  105  2  0   73   38   121 0.877   3.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_1|327_aa
MVEKDTTYMYGGGSEQAESSSMASCKITERVKTSGKSEDRKMCGWLWPCGHKGKLPQKLQ
CPCTLSSDFHNNDHILQGMGLPESQTAVIFINVLLGLATQCGYSGLVLGMSAESCDVIRL
QVSQPWILAPAPVECILNRATSVPVKILGTHSSHASGALKPAAALWEPLSGLAKAGAGSL
SLRGGVEGEAQVGTRAARGACGPARVPDVTLTAKICSFTPEASETTNPPGGTNNSRHAAL
KAVTLTAKVCSFTPEPARPRTHQKEETPNTSEYQKEQTPDMPPLRTVTLTARVCSFILEI
SETKNPPIPDTSGHGALHPKCSSSSCG

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_1|984_bp
atggtagagaaagacactacttatatgtacggaggaggtagtgaacaagctgagagttcg
tcgatggcatcctgcaaaatcacagaaagggttaagacttcaggcaaaagtgaagacagg
aaaatgtgtggctggctgtggccttgtggccacaaaggaaaacttcctcagaaactacag
tgtccttgtactctttcctctgacttccacaataacgaccacatcctccaggggatgggg
cttcctgagagccagactgcagtgatttttatcaatgtccttctgggtctagccacccaa
tgcggctacagtgggctggtgctggggatgtctgcagagtcctgtgatgtgatccgtctt
caggtctcccagccatggatactagcacctgctccagtggagtgtattctcaaccgagca
accagtgttcctgttaaaatccttggcacccactctagccacgcttcaggagcccttaag
cccgctgctgcactgtgggagcccctttctgggctggccaaggccggagccggctccctc
agcttgcggggaggtgtggagggagaggcgcaggtgggaaccagggctgcgcgtggtgct
tgcgggccagcacgcgttccggatgtaacactcactgcgaagatctgcagcttcactcct
gaagccagcgagaccacgaacccaccaggaggaacaaacaactccagacatgccgcctta
aaagctgtaacactcactgcgaaggtctgcagcttcactcctgaaccagcgagaccacga
acccaccagaaggaagaaactccgaacacatccgaatatcagaaggaacaaactccggac
atgccgcctttaagaactgtaacactcactgcgagggtctgcagcttcattcttgaaatc
agtgagaccaagaacccaccaattccggacacatcaggacatggtgccctgcatcccaag
tgctccagctccagctgtggctaa

>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_2|361_aa
MWKQLWNWLTGRGWNSLEDSEDRKIWDSLELPEDLLNGFDQSADSDMENKVQAEVVSDGH
GELVGNWGKEIGSIRPCSRDLWNSEFERDDLGYLAEEISKWQSVLNKAEHKQIRENCFDK
AKHKSLENLQPDNEIEKKTPFSGEKFKLAAEICISHEELNVHHLDNGEIVSKACQRPLGQ
PLPSQAWRPRREKWFPGLNPVPLSYVQPQDLVPCIPAAPAITNVQLRPLFQRVQAPSLGS
FHVVLGLRVHRSQELRFGNLHLDFRGCIETLGSPSRSSLQGWSPHGEPLLRAPTGALPSG
SVRRGPPDSRMIDPLTACTVCLEKPQTLNASHESSLEEGFTLQSHRSRTAQGHGSPPFAS
A

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_2|1086_bp
atgtggaagcaactttggaattggctgacaggcagaggttggaacagtttggaggactca
gaagacaggaaaatctgggacagtttggaacttcctgaagacttgttgaatggctttgac
caaagtgctgatagtgatatggaaaacaaagtgcaggctgaggtggtctcagatggacac
ggggaacttgttgggaactggggcaaagagattggcagcattcgcccctgctctagagat
ctgtggaactctgaatttgagagagatgatttagggtatctggcagaagaaatttctaag
tggcaaagtgttttgaacaaagcagagcataaacaaatcagagaaaactgctttgacaaa
gcaaagcataaaagtttggaaaatctgcagcctgacaatgagatagaaaagaaaacccca
ttttctggggagaaattcaagctggctgcagaaatttgcataagtcatgaggaattgaat
gttcaccacctagacaatggggaaattgtctccaaggcatgtcagagacctttagggcag
cctctgccatcacaggcctggaggcctaggagggaaaaatggtttcctgggctgaatcca
gtgcccctcagctatgtgcagcctcaggacttggtgccctgcatcccagctgctccagcc
attaccaatgtacagctcagaccattgtttcagagggtacaagccccaagccttggcagc
ttccacgtggtgttgggcctccgtgtgcacagaagtcaagaattgaggtttgggaacctc
catctagatttcagaggatgtatagaaacacttggaagtccaagcagaagttcacttcag
ggatggagccctcatggagaacctctgctaagagcccccactggggcactacctagtgga
tctgtgagaagagggccaccagactccagaatgatagatccactgacagcttgcactgtg
tgcctagaaaagccacagacactcaatgctagccatgaaagcagcttggaggagggcttt
accctgcaaagccacaggagcagaactgcccaaggccatgggagcccaccttttgcatca
gcataa

>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_3|442_aa
MFYKVIELHLQRSHGPRWSQFPVIHFVVTISESVKVLVQQAIEMDSNLEFDFIIGLRVPD
AIGPNCRYKGKLVAIEMGHETIWPPPTKKLEGSLLSHIPGPGHRRSRSGGGTTTPTAPRA
KLGPPEGRKKITYVFRRFPTITQISGPGGRIVFLVTVHAVRLVESPLSSGAAEGGRNSTL
ARRWRVVVLGPRAFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILT
ESEIKLDGVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEI
NKQLIFTTEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGN
GDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRGSEIP
KHMLADVFSVKTEMIDQEEGIS

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_3|1329_bp
atgttttacaaagtgattgaacttcatttgcagaggtcacatgggcctagatggtcacag
ttccctgtgattcactttgtggttacaatttctgaatcagttaaagttcttgtgcagcaa
gcaatagaaatggactctaacttagagtttgactttataattggccttcgtgtgcctgat
gcaattggccctaattgtagatacaaaggcaaattagtagcgatagaaatggggcatgag
acaatttggccacctcctacaaagaaactcgagggctcgcttctttctcacatccctggc
ccggggcaccggaggtcccgctccggcggaggaactacaacccccacagcaccgcgcgcg
aagctgggcccccctgagggaaggaaaaaaattacgtacgtttttcgtcgctttcccacg
atcacacagatctcaggtccaggaggacgcatcgtctttttagtaacagtgcatgctgtg
aggcttgtagagtcgcctctctcttcaggcgcagcagagggcggccgcaatagtacgctc
gcgcggcggtggcgggtggtggtccttggaccacgcgcatttcagcaggaacttgatgca
aggcatgacaaatatgagagacttgtgaaacttagtcgggatataactgttgaaagtaaa
aggacaatttttctcctccataggattacaagtgctcctgatatggaagatatattgact
gaatcagaaattaaattggatggtgtcagacaaaagatattccaggtagcccaagagcta
tcaggggaagatatgcatcagttccatcgagccattactacaggactacaggaatatgtg
gaagctgtctcttttcaacacttcatcaaaacacgatcattaattagtatggatgaaatt
aataaacaattgatatttacgactgaagacaatgggaaagaaaataaaactccctcctct
gatgcacaggataagcagtttggtacttggagactgagagtcacacctgtcgattacctt
ctgggagtggctgacttaactggagaattgatgcggatgtgtattaacagtgtggggaat
ggggacattgataccccctttgaagtgagccagtttttacgtcaggtttatgatgggttt
tcattcattggcaacactggaccttacgaggtttctaagaagctgtataccttgaaacaa
agtttggccaaagtggagaatgcttgttatgccttgaaagtcagagggtcagaaattcca
aaacatatgttggcagatgtgttttcagttaaaacagaaatgatagatcaagaagagggc
atttcttag

>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_4|128_aa
MLLQTPPFPVAPQAALTNCSRQLSRGGAYSGGQEILRDLGLDIPEVILFCLTSSYRDADE
VKEDTRCSQSAGEARTSEWAQHSCSPGQGLAMAAAPAPAFSPTHQVTPVQSVVLRSPSNH
RSEAERTT

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_4|387_bp
atgctgctgcagactccacccttcccagtggctccccaggcagcactcacaaactgctct
cgccagctctcccgcggaggggcctactctgggggacaggaaatattgagagaccttggc
cttgatattccagaggttattcttttctgcttgacctcgagttacagagatgcagatgaa
gtcaaagaggataccagatgcagccagtctgctggggaggcacgtacgtctgagtgggcc
cagcacagctgttctccagggcaaggcttggccatggcagctgccccagcgcccgcattc
agcccaacccaccaggtcaccccagtccagtccgtggtgctcagatccccaagcaatcac
aggtcagaggcggaaagaactacgtga

>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_5|486_aa
MAPAPAWRLGSPQEAFNHGRRRRGAGTSHGESRSKLGWVCITAALEEEQPSLPAVTIALV
GLHLQEKIKAHDYFTHCVTHEEHGRDGKKRAAPFPPPLASGKEQEAAQAEREELAAGRMP
GGGPQGAPAAAGGGGVSHRAEMDARHYGAPSSHSGHSSQTYKQNHRTYCQMKLQNTSWLN
SLCSGRQVLQEVSEEGIVVIGDDGSMRVFALKAFQRDKDAILGSECVRNWWVLGLTDFKN
EAADPRVGSWSRWLKSEAADLRGVKLQTFVVTVTAHKGSVDPKSEQQQGLLQTAKEQSFH
NVQRDRRGLPLLAPAACFYSLIWPHPHPADWYSPVVCFDRALIGLGWSMGLGAVEQGAAL
VGEARAAQEPTKGGEAQAWRAAGPQPCPAGRQPRPCEKLNTAAAGPGGTGGRPVRRREKL
PDSGFYCEAIASSCCSDSKEGVSWNISNPAGISPNAIPPRTPRQAPVCDVPCPVSKCSHC
SIPTYE

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_5|1461_bp
atggcaccagcacctgcttggcgtctagggagtcctcaggaagctttcaatcatggcaga
aggcgaaggggagcaggtacatcacacggtgaaagcaggagcaagttggggtgggtctgc
atcacagctgctctggaggaagagcagccatctcttcctgctgtcaccattgccttggta
ggactgcatctgcaagagaagattaaagcacacgattactttactcactgtgtaacacat
gaggaacatggacgagatgggaaaaagcgcgctgctcccttccccccgcctctggcctcg
gggaaggagcaggaggcagcccaggcggagcgggaggagctggcagcggggcgcatgcca
ggcgggggtcctcagggcgccccagccgccgccggcggcggcggcgtgagccaccgcgca
gaaatggatgctagacattatggggctccctccagtcactcgggtcactcgtcacagact
tataaacagaatcacagaacttattgtcagatgaagcttcaaaacaccagttggctaaac
tccttgtgttctggcaggcaggtccttcaggaggtatcagaagaaggcattgttgtcata
ggagatgatggctccatgcgtgtttttgccttgaaggccttccaacgggacaaggatgct
atcttgggctctgagtgtgtccggaattggtgggttcttggtctcactgacttcaaaaat
gaagccgcggaccctcgcgtgggttcgtggtctcgctggctcaagagtgaagctgcggac
cttcgcggagtgaagctgcagaccttcgtggtgactgttacagctcataaaggcagtgtg
gacccaaagagtgagcagcagcaaggtttgttgcaaacagcgaaagaacaaagcttccac
aatgtgcaaagggaccggagagggttgccgctgctggcgcctgcagcctgcttttattct
cttatctggccccacccacatcctgctgattggtacagcccagtcgtctgttttgacagg
gcgctgattggccttgggtggtcgatgggactgggcgctgtggagcagggggcggcgctt
gtcggggaggctcgggctgcacaggagcccacgaagggcggggaggctcaggcatggcgg
gctgcaggtccccagccctgccccgcgggaaggcagccaaggccttgcgagaaattgaac
acagcagctgctggcccaggaggcactggtgggagaccagtaagacggagagaaaaactt
cctgattctgggttttactgtgaggccattgcaagcagttgctgtagtgatagtaaggaa
ggggtgagttggaacatcagcaaccctgcaggtatttctcctaatgctatccctccccgc
accccacgacaggccccagtgtgcgatgttccctgtcctgtgtccaagtgttctcattgc
tcaattcccacctatgagtga

>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_6|192_aa
MGKDLITETPKAMATQAKIDKWDLIKLKSFCTATETTIRVNRQPIEWEKIFAIYPSDKGL
ISRIYKELKQMYKKKQINKPIKKWAKDMNRNFSKEDIYAANRHMKKCSSSLVIREMQIKT
TMRYHITSVRMVIIKKSGNNRCWRGYGETGMLLHCWWECKLVQPLWKTVRRFIKDLELEI
PFGPVIPFDPAI

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_6|579_bp
atgggcaaggacttaataactgaaacaccaaaagcaatggcaacacaagccaaaatagac
aaatgggatctaattaaactaaagagcttctgcacagcaacagaaactaccatcagagtg
aacaggcaacctatagaatgggagaaaatttttgcaatctacccatctgacaaagggcta
atatccagaatctacaaagaacttaaacaaatgtacaagaaaaaacaaataaacaagccc
atcaaaaagtgggcaaaggatatgaacagaaacttctcaaaagaagacatttatgcagcc
aacagacacatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatcaaaacc
acaatgagataccatatcacatcagttagaatggtgatcattaaaaagtcaggaaacaac
agatgctggagaggatatggagaaacaggaatgcttttacactgttggtgggagtgtaaa
ctagttcaaccattgtggaagacagtgcggcgattcatcaaggatctagaactagaaata
ccatttggcccagtgatcccatttgacccagcgatctaa

>gi568815597f:231429252_231664902|GENSCAN_predicted_peptide_7|540_aa
XSQGERWLPSLWFSGLNHSSLLALENANSPDEEGSATMQHTSSDKKQQDSSLNGSLIPFH
LTGGLQPPLTDMFWPATGQYPPGTELPQEGAGSHLCCFAAFTGDISRDMDGVGVGSHYPP
ETNTGTENQRMHALIYKWELNDENTWTHRGEQHTLGTISGQWPAKQQGPGQPCKPHAGEG
LSPCMAMQGTAAPPRKPGTSRPKVDKTTKMGRNQSRKAENPKNQSTSSPPKDHSSSPATE
QSWTENDFDELTQVDFRRAPEGSTKHGKEQRVPATAKTCQTVKTINARKKLHQLTVLEVL
ARAIRQEKEIKSIPLGKEEVKLSLLADDMIVYLENPIISAQNLLKQISNFSNVSGYKINV
QKSQAFLYTNNRQTETQIMSKLPFTIATKRIKHRGIQLTRDVKNLFKENYKLLLNEIKED
TNKWKNIPCSWIGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAC
IAKTILSKKNKAGGNTLLQTILQGYSNQNSMVLVPKQRDRPMEQNRALRNNTTHLQPSDL

>gi568815597f:231429252_231664902|GENSCAN_predicted_CDS_7|1623_bp
nnctcccagggggagaggtggctgccatctctgtggttcagtggactcaaccattccagc
ctgctggctttggagaatgcaaacagtccagatgaggaagggtctgccacaatgcagcac
acctcctcagacaaaaagcagcaagactcatctttaaatgggtccctgataccattccac
ctgactgggggtctccagccacctcttacagatatgttctggccagcaacaggtcagtat
ccccctggcacagagcttccacaggaaggagctggcagccatctttgctgttttgcagcc
ttcactggtgatatctccagggatatggatggagtcggagttggaagccattatcctcca
gaaactaacacaggaacagaaaaccaaagaatgcatgctctcatctataagtgggaacta
aatgatgaaaatacatggacacatagaggggaacagcacacactgggaactatcagtggg
cagtggccagctaagcagcaagggccagggcaaccttgcaaaccacacgctggagagggc
ctgagtccctgcatggccatgcaaggcacagcagcccctccacgcaagcctggtacctca
agaccaaaggtagataaaaccacaaagatggggagaaaccagagcagaaaagctgaaaat
cctaaaaaccagagcacctcttctcctccaaaggatcacagctcctcgccagcaacagaa
caaagctggacagagaatgactttgacgagctgacacaagtagacttcagaagagctcct
gaaggaagcactaaacatggaaaggaacaacgggtaccagccactgcaaaaacatgccaa
actgtaaagaccatcaatgctaggaagaaactgcatcaactaacagtgttggaagttctg
gccagggccatcagacaagagaaagaaataaagagtattccattaggaaaagaggaagtt
aaattgtccctgttggcagatgatatgattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagcagataagcaacttcagtaatgtctcaggatacaaaatcaatgtg
caaaaatcacaggcattcctatacaccaataacagacaaacagagacccaaatcatgagc
aaactcccattcacaattgctacaaagagaataaaacaccgaggaatccaacttacaagg
gatgtaaagaacctcttcaaggagaactacaaactactgctcaacgaaataaaagaggac
acaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcctgc
attgccaaaacaatcctaagcaagaagaacaaagctggaggcaacacactacttcaaact
atactacaaggctacagtaaccaaaacagcatggtgctggtaccaaaacagagagataga
ccaatggaacagaacagagccctcagaaataacaccacacatctacaaccatctgatctt
tga