GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:47:06

Sequence gi568815597f:226123682_226325809 : 202128 bp : 42.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    644    688   45  1  0   91   94    40 0.518   5.65
 1.02 Intr +   1626   1685   60  2  0   75  100   126 0.933  10.51
 1.03 Intr +   5001   5186  186  2  0   78   73    62 0.175   2.66
 1.04 Intr +   9689   9773   85  1  1   72  110    30 0.664   2.07
 1.05 Term +  11438  11637  200  0  2   79   50   237 0.513  15.58
 1.06 PlyA +  14259  14264    6                               1.05

 2.11 PlyA -  17068  17063    6                               1.05
 2.10 Term -  23140  22929  212  2  2  109   42   181 0.993  12.07
 2.09 Intr -  28938  28654  285  1  0   50   70   318 0.756  22.59
 2.08 Intr -  31152  30966  187  0  1   95  100   251 0.999  25.34
 2.07 Intr -  35677  35503  175  0  1   60   96   269 0.999  23.92
 2.06 Intr -  38008  37850  159  0  0   85  106   281 0.999  27.78
 2.05 Intr -  42319  42178  142  2  1  115   77   121 0.997  12.19
 2.04 Intr -  63068  62709  360  0  0  -19  105   408 0.041  26.07
 2.03 Intr -  73527  73478   50  2  2   61   75   135 0.334   6.91
 2.02 Intr -  76552  76388  165  0  0   46   67   117 0.180   3.55
 2.01 Init -  85919  85756  164  2  2   76   56   168 0.061   9.74
 2.00 Prom -  92682  92643   40                              -5.45

 3.00 Prom +  95568  95607   40                              -7.45
 3.01 Init + 100001 100393  393  1  0   99   94   384 0.934  36.88
 3.02 Term + 101826 102131  306  2  0   96   55   215 0.516  13.13
 3.03 PlyA + 105888 105893    6                               1.05

 4.21 PlyA - 107498 107493    6                               1.05
 4.20 Term - 108925 108820  106  0  1   95   48    72 0.968   0.80
 4.19 Intr - 109512 109415   98  0  2   84   91    73 0.990   5.09
 4.18 Intr - 109842 109663  180  0  0   55   94   184 0.957  14.84
 4.17 Intr - 115415 115290  126  2  0   82  107    78 0.969   9.06
 4.16 Intr - 121385 121245  141  2  0   77   72    36 0.450   0.53
 4.15 Intr - 127238 127158   81  2  0   99   91    43 0.780   4.62
 4.14 Intr - 131559 131449  111  0  0  112    0    70 0.346   0.26
 4.13 Intr - 141953 141852  102  2  0  117   83    79 0.997   9.75
 4.12 Intr - 142651 142532  120  1  0   70   92   114 0.999   9.77
 4.11 Intr - 144409 144276  134  2  2   86   99   121 0.999  12.44
 4.10 Intr - 154251 154094  158  2  2   48  111   113 0.989   8.33
 4.09 Intr - 162777 162652  126  2  0   88   83    47 0.649   3.07
 4.08 Intr - 164116 163983  134  1  2   88   44    65 0.227   0.62
 4.07 Intr - 172265 172161  105  2  0   32   91    62 0.046   0.39
 4.06 Intr - 184936 184821  116  2  2  106   39    39 0.018   0.05
 4.05 Intr - 186123 185945  179  2  2   64   74   132 0.767   8.04
 4.04 Intr - 187181 187074  108  1  0  111   44    54 0.595   1.78
 4.03 Intr - 192751 192580  172  2  1   57   63    63 0.691  -1.22
 4.02 Intr - 194884 194329  556  1  1  -35   71   521 0.113  29.59
 4.01 Init - 201983 201837  147  2  0   78   72    41 0.221   1.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  62994  62709  286  0  1   93  105   329 0.956  32.39
S.002 Sngl -  92752  92492  261  1  0   59   43   199 0.831   7.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:226123682_226325809|GENSCAN_predicted_peptide_1|191_aa
MEHLGEQQRLSSWHQEGLRSPQTQMRPLDGAKASKIPAPTPAWNAHSAFITALNSTWFPK
AMSPHTTSQGYNTLGFSDTVNTKQHELQDTQDSWRGAEPHETHTKDGPAFQGSLDPWFLS
WKRGAGCQLLDSRARAGLHARLRQRLAPGAQVLQECVFNELLLNAAEPCSTLLPRPGVWE
PDDSPAREGRT

>gi568815597f:226123682_226325809|GENSCAN_predicted_CDS_1|576_bp
atggagcacctgggagagcagcagcgactcagctcctggcaccaggaagggctgcggtcc
ccgcagacccagatgcgtccactagatggcgccaaagccagtaagattccagcccccacc
ccagcctggaacgcccacagtgcttttatcacagctcttaactccacttggttccccaaa
gctatgagcccacataccacctcccagggctacaacactttgggtttctcagacactgtc
aacactaagcagcatgaactgcaggacacacaggacagctggagaggggcagaaccgcat
gagacacacacgaaagacggccctgccttccagggctcgctagatccttggttcctgtcg
tggaagagaggggcaggatgtcagttacttgacagcagggcccgtgctgggctccatgcc
cggcttcgccagcgtctggcgccgggagcgcaggtgctccaagagtgtgtgttcaatgaa
ttgttactgaatgctgcagaaccctgctccacgctgcttcctcgccctggcgtttgggag
cctgatgacagccctgcccgtgaaggccgcacctag

>gi568815597f:226123682_226325809|GENSCAN_predicted_peptide_2|632_aa
MTLGVRPLPARSAGASWLRGAFQPSAGGSFRERKKSGAVLSCRNSADRRRRPNACLNNKT
RPCPRRRRRMRRRRRRRREGEEGEGGGGGRRRGRRVGGGKKRKEEIKRGSPISTERLGQR
YRLRPAAEVRGQQEVDTWLPSVPAEEVQQPEMAAVLNAERLEVSVDGLTLSPDPEERPGA
EGAPLLPPPLPPPSPPGSGRGPGASGEQPEPGEAAAGGAAEEARRLEQRWGFGLEELYGL
ALRFFKEKDGKAFHPTYEEKLKLVALHKQVLMGPYNPDTCPEVGFFDVLGNDRRKEEEER
RRREEEERERLQKEEEKRRREEEERLRREEEERRRIEEERLRLEQQKQQIMAALNSQTAV
QFQQYAAQQYPGNYEQQQILIRQLQEQHYQQYMQQLYQVQLAQQQAALQKQQEVVVAGSS
LPTSSKVNATVPSNMMSVNGQAKTHTDSSEKELEPEAAEEALENGPKESLPVIAAPSMWT
RPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFWEFATDNYDIGFGVYFEWT
DSPNTAVSVHVSESSDDDEEEEENIGCEEKAKKNANKPLLDEIVPVYRRDCHEEVYAGSH
QYPGRGVYLLKFDNSYSLWRSKSVYYRVYYTR

>gi568815597f:226123682_226325809|GENSCAN_predicted_CDS_2|1899_bp
atgaccttgggagtccgaccacttcccgcacgtagcgcaggtgcctcctggctcagaggg
gcatttcagccatctgccggaggcagcttcagagaacggaaaaagagcggcgccgtgttg
agttgcaggaacagcgcggacagacggagacggccaaatgcctgcctgaacaataaaaca
agaccctgtccgaggagaaggagaagaatgagaagaaggaggagaagaaggagagaagga
gaagaaggagaaggaggaggaggaggaagaagaagaggaagaagagtaggaggaggaaag
aaaagaaaagaggaaataaaaagaggaagccccataagcactgagcggctggggcagcgc
taccgtctccggccagcagcggaggtcagaggtcagcaggaagtcgatacgtggctgccg
tctgtccccgctgaggaggtgcagcagccggagatggcggcggtgctgaacgcagagcga
ctcgaggtgtccgtcgacggcctcacgctcagcccggacccggaggagcggcctggggcg
gagggcgccccgctgctgccgccaccgctgccaccgccctcgccacctggatccggtcgc
ggcccgggcgcctcaggggagcagcccgagcccggggaggcggcggctgggggcgcggcg
gaggaggcgcggcggctggagcagcgctggggtttcggcctggaggagttgtacggcctg
gcactgcgcttcttcaaagaaaaagatggcaaagcatttcatccaacttatgaagaaaaa
ttgaagcttgtggcactgcataagcaagttcttatgggcccatataatccagacacttgt
cctgaggttggattctttgatgtgttggggaatgacaggaggaaggaggaagaggagcga
aggcggcgtgaagaggaagaaagagaacgtctgcaaaaggaggaagagaaacgtaggaga
gaagaagaggaaaggcttcgacgggaggaagaggaaaggagacggatagaagaagaaagg
cttcggttggagcagcaaaagcagcagataatggcagctttaaactcccagactgccgtg
cagttccagcagtatgcagcccaacagtatccagggaactacgaacagcagcaaattctc
atccgccagttgcaggagcaacactatcagcagtacatgcagcagttgtatcaagtccag
cttgcacagcaacaggcagcattacagaaacaacaggaagtagtagtggctgggtcttcc
ttgcctacatcatcaaaagtgaatgcaactgtaccaagtaatatgatgtcagttaatgga
caggccaaaacacacactgacagctccgaaaaagaactggaaccagaagctgcagaagaa
gccctggagaatggaccaaaagaatctcttccagtaatagcagctccatccatgtggaca
cgacctcagatcaaagacttcaaagagaagattcagcaggatgcagattccgtgattaca
gtgggccgaggagaagtggtcactgttcgagtacccacccatgaagaaggatcatatctc
ttttgggaatttgccacagacaattatgacattgggtttggggtgtattttgaatggaca
gactctccaaacactgctgtcagcgtgcatgtcagtgagtccagcgatgacgacgaggag
gaagaagaaaacatcggttgtgaagagaaagccaaaaagaatgccaacaagcctttgctg
gatgagattgtgcctgtgtaccgacgggactgtcatgaggaggtgtatgctggcagccat
caatatccagggagaggagtctatctcctcaagtttgacaactcctactctttgtggcgg
tcaaaatcagtctactacagagtctattatactagataa

>gi568815597f:226123682_226325809|GENSCAN_predicted_peptide_3|232_aa
MATAESRALQFAEGAAFPAYRAPHAGGALLPPPSPAAALLPAPPAGPGPATFAGFLGRDP
GPAPPPPASLGSPAPPKGAAAPSASQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLA
ALTLLPESRIQVWFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVD
VNCLPEPNGVGGGISDSSSQGQNFETCSPLSEDIGSKLDSWEEHIFSAFGNF

>gi568815597f:226123682_226325809|GENSCAN_predicted_CDS_3|699_bp
atggccacagccgagtcccgtgcgctccagtttgccgagggcgccgcgtttccagcgtac
cgggccccccacgccggcggggcgctcctgccgcccccgagccctgcggcagccctgctc
cctgcgccgcccgcgggccccggcccagcgacctttgcgggcttcctcggccgggacccc
gggccggccccgccgccccccgccagcctgggctcgcctgcgccccccaaaggcgcggcc
gccccgtcggcgtcgcagcgccgcaagcgcacgtctttcagcgccgaacagctgcagctg
ctggagctcgtcttccgccggacccggtaccccgacatccacttgcgcgagcgcctggcc
gcgctcaccctgctccccgagtccaggatccaggtatggttccagaacaggcgtgccaag
tctcggcgtcagagtgggaaatccttccaacctttggctaggccggagattatcctcaac
cactgtgctcctggaactgaaacgaaatgtctgaagccccagctgcctcttgaggtagat
gtgaactgcctgcccgaaccaaacggggttggagggggcatctctgactctagctcccaa
ggtcagaattttgaaacctgttcccctctctctgaagacattggttcaaagctggactca
tgggaggaacacatcttttctgcctttggtaacttttga

>gi568815597f:226123682_226325809|GENSCAN_predicted_peptide_4|999_aa
MEWAGLSSSAMRSYWLGAAWGEHGVDMNTVAELRDSSWRLEISVAVMVKNPRKYLGCVGT
GETVESDAEGEKGVEAADVTALVEFHCKAVNVEQAVTIMEAIHVLGVLHTITSGITRIVS
VGKRRKDRRVLPKARPNKTGPSSGEGSWRRFLPYYLKRPYGRGPQCSSPPAQGAEMEDAD
SQGAGAPGRPVRQDMYVAIGHDSTGALLAKDSLERMVMKRIKRNQGDETPGQQQDVIILW
PSGQLTSKIPQASQKAIAMTFALDWSTFAVTGPLPPLGCHCLDCALSSGSYCMAAPSYPR
HRAGISNETSFSSHPVTHPILYFPRLERSRSPAARSSASNIRERRARIARGRWDRVPDVA
TRRGLLRPAVSGKVRGRRRPSNVGFGNSPASTGTCDLHCPPHPPTGVSTPGSVSVSEGWP
LPLGPQPFRNSKRSRLFSDEDDRQINTRSPKRNQRVAMVPQKFTATMSTPDKKASQKIGF
RLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIR
RLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVT
ARLRGVHDGLFTGQIDAVDTLNATYRVTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQ
KQRPSRFFMTPPRLHYTPPLQSPIIDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVE
ARGSISAVFTKNQIKPLEVKLTKYAFQKSLLTGSRRTRLSKILMIKKEHIKKLREMNTEA
EKLVLWQYLSRFKMLKSFDLAVALLETSTLMFAFVQNDYMFIAACLQDLKKSYSMPISIE
FQRRYATIVLELEQLNKDLNKVLHKVQQYCYELAPDQGLQPADQPTDMRRRCEEEAQEIV
RHANSSTGQPCVENENLTDLISRLTAILLQIKCLAEGGDLNSFEFKSLTDSLNDIKSTID
ASNISCFQNNVEIHVAHIQSGLSQMGNLHAFAANNTNRD

>gi568815597f:226123682_226325809|GENSCAN_predicted_CDS_4|3000_bp
atggaatgggctggtttgagcagctctgccatgcgcagttattggctaggagcagcctgg
ggagagcatggtgttgatatgaatactgtggcagagcttagggacagcagttggaggctg
gagatctcagtggctgtgatggttaagaaccccaggaagtaccttggctgtgtaggaact
ggagagactgtggagtctgacgctgaaggagaaaagggtgtggaagcagcagatgtcaca
gccctggtggaattccactgcaaggcagtaaacgtggagcaggccgtaaccattatggaa
gcaatccacgtcctgggggtcctccacacaattaccagcggaattaccagaatagtgagc
gtggggaaaagaaggaaggataggagagtgctcccaaaggccaggcccaacaagactggc
ccttcctcaggagaaggttcctggagaaggttcctgccctactacctgaagagaccctat
gggcgtggaccacagtgttccagccctccagcgcagggagcggagatggaggatgctgac
agccagggtgcaggagcaccaggtagaccagtgaggcaagatatgtatgtggctataggc
catgattccactggggccctcttagccaaagacagcctagagaggatggtgatgaagagg
ataaaaagaaatcaaggagatgagaccccaggtcagcagcaagatgttatcattctttgg
ccctccggacagttaacaagtaaaatacctcaagcatcccaaaaagctattgccatgacc
tttgctcttgactggtccacttttgctgtgactggaccacttccacctcttggttgccat
tgtttagattgtgctttgtcttcaggatcatactgcatggcagcacccagttacccaagg
cacagagctggcatcagcaatgagacttccttctcctcacacccagtgactcacccaatc
ctttattttccacgtcttgaaaggtctcgctccccggctgcacgcagctcagcttccaac
attcgggaaaggcgtgcccggatcgcgaggggccgctgggaccgagtcccggacgtcgcg
acgcgcagggggctgctgcggccggcggtctcgggaaaagtgaggggacggaggcgccca
agcaacgtgggtttcgggaactctcctgcctctacgggcacttgtgatcttcactgtcct
ccccacccccccaccggtgtgtccacccctggaagtgtttccgtgtcagagggttggccc
cttcccctgggaccacagcctttcagaaattcaaaacgaagtcgacttttttctgatgaa
gatgataggcaaataaatacaaggtcacctaaaagaaaccagagggttgcaatggttcca
cagaaatttacagcaacaatgtcaacaccagataagaaagcttcacagaagattggtttt
cgattacgtaatctgctcaagcttcctaaagcacataaatggtgtatatacgagtggttc
tattcaaatatagataaaccactttttgaaggtgataatgacttctgtgtatgtctaaag
gaatcttttcctaatttgaaaacaagaaagttaacaagagtagaatggggaaaaattcgg
cggcttatgggaaaaccacggagatgttcttctgcattttttgaggaagagagatcagca
ttaaaacagaaacggcagaaaataaggctcttacaacaaaggaaagttgcagatgtttca
caattcaaagatctcccagatgaaattcctttgcctctggttattggaacgaaagttaca
gcacgattacgtggtgttcatgatggtttgttcactggacaaatagatgctgtggatact
cttaatgctacttatagagtaacttttgataggacagggcttggaacccataccatccct
gactatgaagttctcagtaatgaacctcatgagacaatgccaattgctgcctttggacaa
aaacagcggccttctcgattttttatgaccccaccacggttacattatactcctcctctc
cagtcaccaattatagataatgatcctttattaggacagtcgccgtggagaagtaaaatt
tctggctctgacactgaaacattaggtggttttccagtagaatttcttatccaagtggaa
gcaagagggagtatttctgcagtattcactaagaaccagattaagcccctggaagtaaaa
ctcacaaagtatgcttttcaaaaaagcctcctaactgggtcccgtagaaccagattatca
aaaattctcatgattaaaaaggaacatatcaagaaattaagggaaatgaacacagaagca
gaaaaattggtgctttggcaatatctatcaagatttaaaatgctcaaatcctttgattta
gcagttgcactcctggaaacttctacacttatgtttgcctttgtccaaaatgactacatg
ttcattgcagcatgtttgcaagatctgaagaaatcatattccatgcccatcagcattgaa
tttcagcggagatatgcaacaattgttctggagcttgaacagctgaacaaggacctaaac
aaagttttgcataaagttcaacagtattgctatgagcttgctccagaccaggggctccag
cctgcagatcagccaacagatatgagacgcaggtgtgaggaagaagcacaggaaattgtt
cggcatgcaaattcctcaacaggacagccctgcgttgaaaatgaaaatctgacagactta
atttccaggcttacagctattttgttacaaattaagtgtctagcagaaggaggagacctg
aattcctttgaattcaaatcacttacagactcattaaatgatatcaagagtacaatagac
gcttctaatatcagttgctttcagaataatgtagaaatccatgttgcacatattcagagt
ggcctgagccagatgggaaacttacatgcctttgcagcaaataacaccaacagagactga