GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:31:38

Sequence gi568815597f:197817824_198029256 : 211433 bp : 38.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6372   6411   40                              -3.35
 1.01 Init +  12340  12661  322  0  1   73  -66   357 0.363  16.34
 1.02 Term +  14635  16085 1451  2  2   44   40   533 0.424  34.01
 1.03 PlyA +  16215  16220    6                               1.05

 2.00 Prom +  16979  17018   40                              -2.75
 2.01 Init +  34622  34652   31  1  1   91   76    17 0.103   0.75
 2.02 Intr +  37331  37502  172  0  1   74   71    87 0.025   3.68
 2.03 Intr +  65953  66121  169  1  1   67    5   166 0.002   5.23
 2.04 Intr +  66168  66319  152  2  2   62   47   127 0.005   4.04
 2.05 Intr +  84641  84797  157  2  1   90   14    91 0.120   0.99
 2.06 Intr +  84815  84910   96  1  0   58   86    58 0.096   1.89
 2.07 Intr +  85003  85090   88  0  1   14   81   143 0.953   4.82
 2.08 Intr +  86360  86477  118  0  1   92   55   109 0.228   6.60
 2.09 Term +  90994  91159  166  1  1   81   50   142 0.240   6.11
 2.10 PlyA +  91289  91294    6                               1.05

 3.06 PlyA -  91686  91681    6                               1.05
 3.05 Term -  92480  92311  170  0  2   93   43    83 0.333   1.36
 3.04 Intr -  92864  92675  190  2  1   82   36   216 0.969  14.04
 3.03 Intr -  93191  93088  104  0  2   49   99    66 0.944   2.77
 3.02 Intr -  94726  94557  170  0  2   41   91    68 0.595   1.07
 3.01 Init -  95818  95763   56  1  2   89  105   129 0.998  13.52
 3.00 Prom -  96676  96637   40                             -10.55

 4.00 Prom +  96746  96785   40                              -8.65
 4.01 Init +  98856  98928   73  2  1   60  100   106 0.903  10.28
 4.02 Intr + 100056 100174  119  1  2   72   91   199 0.851  17.86
 4.03 Intr + 102149 102351  203  1  2  122   78   130 0.126  12.56
 4.04 Intr + 103481 103836  356  2  2   91   69   311 0.184  23.51
 4.05 Intr + 109768 109970  203  2  2   55  110   342 0.471  31.18
 4.06 Term + 111179 111436  258  1  0   30   38   143 0.765  -1.93
 4.07 PlyA + 111556 111561    6                               1.05

 5.04 PlyA - 112447 112442    6                               1.05
 5.03 Term - 113403 113392   12  0  0  111   42    10 0.122  -4.07
 5.02 Intr - 115496 115452   45  2  0  101  103     9 0.193   1.39
 5.01 Init - 120356 120135  222  2  0   42   86   212 0.410  15.00
 5.00 Prom - 150042 150003   40                              -4.25

 6.00 Prom + 165176 165215   40                              -4.45
 6.01 Init + 171432 171530   99  2  0  107   -5   130 0.250   5.91
 6.02 Intr + 175381 175407   27  0  0  114   99     3 0.277   1.39
 6.03 Term + 182348 182410   63  1  0  112   55    56 0.397   1.61
 6.04 PlyA + 182942 182947    6                               1.05

 7.03 PlyA - 184986 184981    6                               1.05
 7.02 Term - 192973 192792  182  2  2   25   38   155 0.789   0.99
 7.01 Init - 193163 193028  136  2  1   59   46   129 0.910   6.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  54011  54366  356  0  2   74   42   192 0.841   6.87
S.002 Intr -  65762  65613  150  1  0   59   72   123 0.837   6.16
S.003 Init +  84827  84910   84  1  0  107   86    98 0.834  10.38
S.004 Sngl -  98476  97946  531  1  0   68   38   276 0.892  15.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_1|590_aa
MGKKQSRKTGNSKNQSASPPPKERGSSPAMEQSWMENDFDKLREEGFRRSNYYELQEEIR
TNGKEVKSFEKKLDEWITRITNAGKSLKDLMELKTKARELHDKCGSLKIQTTIREQYKQH
YANKLENLEEIDKFLDTYILPRLNQEEVESLNRPITGSEIEAIINSLPTKKSPRPDGFRA
KFYQRYKEELVPFFLKLSQSTEKEGILPNSFYEASIILIPNPGRDTTKKENFRPISLMNI
DAKILNKIQANRIQQHIKKLIHHDQVGFIPGMQGWFNIHKSVNVIQHINRTKDENHMIIS
RDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTR
QGCPLSPLLFNIVLEALARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPTISAQNL
LKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVK
DLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMTFFT
ELEKSNLKFLWNQKRAHIAKSILSQKNKAGGITLPDFKLYYKATVTKTAW

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_1|1773_bp
atgggaaaaaaacagagcagaaaaactggaaactctaaaaatcagagcgcctctcctcct
ccaaaggaacgcggctcctcaccagcaatggaacaaagctggatggagaatgactttgac
aagttgagagaagaaggcttcagacgatcaaactactacgagctacaggaggaaattcga
accaatggcaaagaagttaaaagctttgaaaaaaaattagatgaatggataactagaata
accaatgcagggaagtccttaaaggacctgatggagctgaaaaccaaggcacgagagcta
catgacaaatgcggaagcctcaaaatacaaactaccatcagagaacagtataaacagcac
tacgcaaataaactagaaaatctagaagaaattgataaattcctcgacacatacatcctc
ccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaatt
gaggcaataatcaatagcttaccaacgaaaaaaagtcccagaccagatggattcagagcc
aaattctaccagaggtacaaagaggagctggtaccattctttctgaaactatcccaatca
acagaaaaagagggaatcctccctaactcattttatgaggccagcatcatcctgatacca
aacccgggcagagacacaaccaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatacaggcaaaccgaatccagcagcacatcaaaaagctt
atccaccacgatcaagtgggcttcatccctgggatgcaaggctggttcaacatacacaaa
tcagtaaatgtaatccagcatataaacagaaccaaagacgaaaaccacatgattatctca
agagatgcagaaaaggcctttgacaaaattcaacaacgcttcatgctaaaaactctcaat
aaattaggtattgatgggacatatctcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaacgggcacaaga
cagggatgccctctctcaccactcctattcaacatagtgttggaagcactggccagggca
attaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagatgacatgattgtatatctagaaaaccccactatctcagcccaaaatctc
ctcaaactgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaa
tggaagaacattccatgctcatgggtgggaagaatcaatatcatgaaaatggccatactg
cccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaatctaatttaaagttcctatggaaccaaaaaagagcccacatcgccaag
tctatcctaagccaaaagaacaaagctggaggcatcacactgcctgacttcaaactatac
tacaaggctacagtaaccaaaacagcatggtag

>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_2|382_aa
MDRSLSEPSEERTHFSDTLNHSLPPLSLIYTLRTIEDHTGCQELEVVLQPTTYGLKRLLP
DGLALHFSQASLLQVYWSLLEVHARPFARISPAEATEQQRLLPVPSSGSFAPEGHPPDAS
QSSPEARGSGTHSRRDSSLIRARMLHWEIRCCIQRCQAGTFMSAETVPIATPSPSGPAGE
GRRLSPSASTCCHGSANRPHAAMATSCPRPARRAQARVGRPSGPQRRAGGGMAARQIWAR
TGAALCRQPSAAPPPAPLWAGESGEAFGERRVNRGGATDRGAARCRLRASKQIALLPFSG
YRCASLSILLSSQTVSTLASSLSVATITALPVVGNWLKKKGCLSRRTLMWDVRNSYPQFF
LAELQALRARTAKEPLEGCGGD

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_2|1149_bp
atggacagatctctttcagaaccttccgaagagagaacccacttttcagacaccctaaac
cactccttacctccactctcactcatatacacgttgcgaacgattgaagaccacacaggc
tgtcaagaattggaagttgtattacagccaactacttatgggttaaaaaggcttttgcca
gatggcctagcattgcattttagtcaggcctctctgctgcaggtctactggagtttgctg
gaggtccacgccagaccgtttgcccggatatcaccagcggaagctacagaacagcaaaga
ttgttgcctgtcccttcctctggaagttttgccccagagggtcacccaccagatgccagc
cagagctctcctgaggcacgggggtcagggacccactcgaggagggattcttcccttatc
agagctcgaatgctgcactgggagatccgctgctgtattcagagatgtcaggcagggacg
ttcatgtctgctgaaactgtgcccatagccaccccttcccccagcgggcccgctggtgaa
ggcagaaggctcagtccgtccgcctccacctgctgccacggcagcgcgaaccgaccccac
gcagcgatggccacgagctgcccaagaccggctcgccgcgcccaggcccgcgttggtcgc
ccctccgggccccagcgccgggccggcggcggcatggcggccaggcagatctgggcacgg
acgggtgccgcgctctgcaggcaaccttccgccgccccgccgccagcacctctctgggcc
ggagagagcggcgaggccttcggtgagcgaagagttaaccgcggcggagcgacagatcgc
ggagctgcacgctgccgcctgcgcgcctcaaagcagatagctctcttacctttctccggg
taccgatgcgcatcactgagcatcttgctctccagtcaaactgtcagcacccttgcttca
tctttgtctgtggccaccattaccgcacttcctgtagtaggaaactggctgaaaaagaaa
ggatgtttgtcacggaggaccctgatgtgggacgttcgtaattcttacccgcaattcttc
ctggcagaacttcaagccttgagggcaagaacagcaaaggagccgctggagggctgcggc
ggggactag

>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_3|229_aa
MRSVPRHLALDARAALDGRVVPFSILRGKGVDHAVMVVALAEKSRESDRRYGPASPSTSS
HPVGRVQTAPPVETSAACENRVGLLLHVGHVGVDAASTPDPQAPPYSLGSNLPYIGQVSQ
PGRDSPPGFIFYAHQRGHRMDGRRYPPENAWVLSTHSCRKQPGLTSLRSNTVLVSGRKAV
NLCVLCHEPNLEAVCGDRGQPSALGTPAHIRASRGPGYAGHSRDSSVSG

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_3|690_bp
atgcgttcagtgccgcgccacctggccctggatgcccgggctgcgctggatggaagagtg
gtaccgttcagcattcttagaggaaaaggagtggatcacgccgtaatggtggttgcactg
gcagagaaaagccgggagtcagaccggcggtacggcccggcttccccaagcacctcctcc
catccggtggggcgcgtccaaaccgctcctcccgtggagacctcagccgcttgcgaaaac
cgcgtgggattgctgctgcatgtggggcacgtgggagtggatgccgcctccacgcctgac
ccacaagctccgccatacagtttagggtcgaatctcccctatatcggtcaggtttcgcag
ccaggaagggacagtcctcccgggttcatcttctatgctcatcagcgaggccatcgaatg
gatggacggcgatacccacccgaaaacgcttgggtgctttcaactcattcctgtcgaaag
caaccgggtttaacctctttgcggtccaataccgttctagtgtcaggaaggaaagccgtg
aatctgtgcgttttgtgtcatgagcccaacctcgaagctgtttgtggggacagaggtcaa
cccagtgccctgggcaccccagcacacatcagagcatccagaggtccagggtacgctgga
cattccagggatagctcagtctctggctaa

>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_4|403_aa
MQTLQTPSPLRMKPASSRVSGPQEAMLFHGISGGHIQGIMEEMERRSKTEARLAKGAQLN
GRDAGMPPLSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAK
DGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHF
GMKDSLVYCRAHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPA
LGVDIVNYNSGCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDA
KDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENGGVDKADGTSLPAPPSADSGALT
PPGTATTLTDLTNPTITVVTSVTSNMDSHESGSPSQTTLTNLF

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_4|1212_bp
atgcagacgctccaaacgccctctccacttcggatgaagccagcatctagtagggtctcc
ggccctcaagaagccatgctctttcacgggatctccggaggccacatccaaggcatcatg
gaggagatggagcgcagatccaagactgaggcccgtctggccaaaggcgcccagctcaac
ggccgcgacgcgggcatgcccccgctcagcccggagaagcccgccctgtgcgccggctgc
gggggcaagatctcggacaggtactatctgctggctgtggacaaacagtggcatctgaga
tgcctgaagtgctgtgaatgtaagctggccctcgagtccgagctcacctgctttgccaag
gacggtagcatttactgcaaggaggattactacagaaggttctctgtgcagagatgtgcc
cgctgccaccttggcatttccgcctcggagatggtcatgcgcgcccgagactctgtctac
cacctgagctgcttcacctgctccacttgcaacaagactctgaccacgggcgaccatttc
ggcatgaaggacagcctggtgtactgccgcgcccacttcgagaccctcttgcaaggagag
tatccaccgcagctgagctacacggagctggcggccaagagcggcggcctggccctgcct
tacttcaacggtacgggcaccgtgcagaaagggcggccccggaagcggaagagcccagcg
ctgggagtggacatcgtcaattacaactcaggttgtaatgagaatgaggcagaccacttg
gaccgggaccagcagccttatccaccctcgcagaagaccaagcgcatgcgaacctctttc
aagcatcaccagctccggaccatgaaatcctactttgccatcaaccacaacccggatgcc
aaggacctcaagcagcttgcccagaaaacaggtctgaccaaaagagttttgcaggtttgg
ttccaaaacgcacgagccaaattcagaaggaaccttttgcggcaggagaatgggggtgtt
gataaagctgacggcacgtcgcttccggccccgccctcagcagacagcggagctctcact
ccacccggcactgcgaccactttaacagacctgaccaatcccactatcactgtagtgaca
tccgtgacctctaacatggacagccacgaatccggaagcccctcacaaactaccttaaca
aaccttttctaa

>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_5|92_aa
MLFPGKQVVQEWKEILKLDRDVLALSQPNPREKQQVRGLRGNRFGEKQVIRSVKSGTNVN
VNKEGKYQDLGKRKEVKAFKKTFKILRIHDTP

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_5|279_bp
atgttgtttcccgggaagcaagtagtgcaagagtggaaggagattttgaagctggaccgt
gatgtgctggctctgagtcagccgaaccccagggagaagcagcaggtgcgtggcctgcgg
ggaaatcgttttggagagaagcaagtaataaggagtgtaaaatctggcacaaatgtaaat
gtgaataaagaagggaaataccaagatttgggtaagagaaaggaagtgaaagcatttaag
aaaacattcaaaattctgagaatacatgatacaccataa

>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_6|62_aa
MGVEEQRVTAASEREVWVPESGGDKVQGQGEVKCFKPVFYSLVLNILDEDHLFNGLDDAH
LH

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_6|189_bp
atgggggtggaggagcagagagtcacagcagcatctgagagagaagtctgggttccagag
agtggaggagacaaagttcagggacaaggggaagtgaaatgctttaaacctgtgttttat
tctctggtcctcaatatattggatgaagaccacctattcaatgggttggatgatgctcat
ctacactga

>gi568815597f:197817824_198029256|GENSCAN_predicted_peptide_7|105_aa
MWETLELPRDLLNGFDQDADSDIDNEVWAEVVSDGDEELVGNWHKEICGTLNLNDLGFLA
EEISKQQSLQEVTEYKSLNILQPENAVEKKNPYSGEKFKPLQKFV

>gi568815597f:197817824_198029256|GENSCAN_predicted_CDS_7|318_bp
atgtgggaaactttggaacttcctagagacttgttaaatggctttgaccaagatgctgat
agtgatatagacaatgaagtctgggctgaggtggtctcagatggagatgaggaacttgtt
gggaactggcataaagagatctgtggaacattgaacttgaatgacttagggtttctggca
gaagaaatttcaaaacagcaaagccttcaagaggtgacagagtacaaaagtttaaatatt
ttgcagcctgaaaatgcagtagaaaagaaaaacccatattctggggagaaattcaagcct
ctgcagaagtttgtgtaa