GENSCAN 1.0	Date run:  8-Nov-116	Time: 03:20:38

Sequence gi568815597f:99546318_99794059 : 247742 bp : 38.03% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4114   4207   94  2  1   90   47    97 0.551   3.90
 1.02 Term +   7469   7847  379  2  1   61   47   165 0.775   2.98
 1.03 PlyA +   7894   7899    6                               1.05

 2.00 Prom +  15299  15338   40                              -4.15
 2.01 Init +  15861  15936   76  2  1   84   89    72 0.860   8.20
 2.02 Intr +  24906  25006  101  1  2  -31   92   129 0.252   0.31
 2.03 Term +  26916  27044  129  2  0   40   32   105 0.250  -2.70
 2.04 PlyA +  27911  27916    6                               1.05

 3.00 Prom +  35663  35702   40                              -0.35
 3.01 Sngl +  42890  43357  468  1  0   65   49   249 0.884  14.58
 3.02 PlyA +  43385  43390    6                               1.05

 4.00 Prom +  47076  47115   40                              -8.55
 4.01 Init +  50289  50492  204  2  0   38   43   135 0.094   2.90
 4.02 Intr +  65786  65843   58  1  1  105   68    51 0.024   2.34
 4.03 Term +  75530  75690  161  0  2   96   47   128 0.904   6.62
 4.04 PlyA +  76047  76052    6                               1.05

 5.00 Prom +  82692  82731   40                              -5.55
 5.01 Init +  99100  99232  133  0  1   87   48    63 0.388   2.55
 5.02 Term + 103207 103475  269  2  2   10   49   214 0.514   4.37
 5.03 PlyA + 103841 103846    6                               1.05

 6.00 Prom + 119082 119121   40                              -6.05
 6.01 Init + 121345 121449  105  0  0   85   80   117 0.809  10.87
 6.02 Intr + 126206 126229   24  1  0   90  100    13 0.255   0.00
 6.03 Intr + 139552 139675  124  0  1   71   87    32 0.060   0.64
 6.04 Intr + 142458 143555 1098  1  0   54   90   972 0.629  82.97
 6.05 Intr + 151406 151577  172  0  1   85   95   148 0.270  13.28
 6.06 Intr + 152223 152383  161  0  2   74   43   166 0.997   9.41
 6.07 Intr + 152665 152843  179  2  2   10   27   283 0.396  13.12
 6.08 Intr + 158013 158087   75  2  0   44   78    67 0.137   0.09
 6.09 Intr + 158338 158638  301  0  1    2   64   285 0.351  12.88
 6.10 Term + 158872 158981  110  2  2   90   41    52 0.355  -1.61
 6.11 PlyA + 159341 159346    6                               1.05

 7.13 PlyA - 159443 159438    6                               1.05
 7.12 Term - 162803 162711   93  2  0  102   53     7 0.388  -4.55
 7.11 Intr - 162942 162881   62  1  2   53  107    56 0.409   1.53
 7.10 Intr - 164632 164489  144  2  0   69   86   148 0.428  12.03
 7.09 Intr - 167718 167688   31  0  1  132   64   -18 0.413  -3.01
 7.08 Intr - 169355 169269   87  2  0  101  110    -2 0.540   2.55
 7.07 Intr - 171208 171093  116  2  2   83   96    33 0.609   2.85
 7.06 Intr - 173330 173217  114  0  0  107   78    42 0.764   4.60
 7.05 Intr - 191951 191765  187  2  1   89   10   148 0.032   5.44
 7.04 Intr - 194623 194476  148  0  1   64  100    53 0.837   3.42
 7.03 Intr - 195956 195862   95  2  2   96   65    22 0.056  -1.46
 7.02 Intr - 201113 200977  137  0  2   95   72   124 0.145  10.87
 7.01 Init - 202451 202256  196  2  1   50   81    83 0.537   2.95
 7.00 Prom - 203643 203604   40                              -7.25

 8.00 Prom + 203735 203774   40                              -7.05
 8.01 Init + 204148 204286  139  0  1   36    9   138 0.467   1.05
 8.02 Term + 204842 204969  128  0  2  107   44   127 0.980   7.66
 8.03 PlyA + 205069 205074    6                               1.05

 9.00 Prom + 211189 211228   40                              -4.65
 9.01 Sngl + 235463 235756  294  1  0   74   42   211 0.433  10.55
 9.02 PlyA + 237281 237286    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 140759 140872  114  0  0   56   71    84 0.801   3.00
S.002 Sngl + 200218 200442  225  0  0   67   42   251 0.804  13.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_1|157_aa
XPRTDSSFLVAAVSEIFMANSLLEASHSEQERNNRSPRWSNQARQRNKSTQIAKEEIKLS
LYASDVIIYLEKPKHSSKRLLDLINEFSKVSGYKINVHKPAALLHTNDNRAENQIKNSIP
FATAAKTNKKIPSNILNQGGERFLQGELQNTAETNHR

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_1|474_bp
ntaccccgcacagactcgagctttctcgtggctgctgtttcagaaatattcatggccaat
tcgctgctcgaagcctcacacagtgagcaggagagaaacaatagaagtcctagatggagc
aatcaggcaagacaaagaaataaaagcacccaaattgcaaaagaggaaatcaaactatca
ctgtatgccagtgatgtgatcatatacctagaaaagcctaaacactcctccaaaagactc
ctagatttgataaatgaattcagtaaagtctcaggttacaaaatcaacgtacacaaacca
gcagcactgctacacaccaacgacaaccgagctgagaatcaaatcaagaactcaatccct
tttgcaacagctgcaaaaacaaacaaaaaaatacctagcaatatacttaaccaaggaggt
gaaagatttctacaaggagaactacaaaacactgctgaaacaaatcatagatga

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_2|101_aa
MDGAGSYYPQRTNAGTENQAPHVLTCTYTCNGLGKAADTKEAHITNTWLLISSSEFGEIN
LQQLQANSTPPNSHQLKASDPQVTSTCKAIWGAMGQCLSPT

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_2|306_bp
atggatggagctggaagctattatcctcagcgaactaatgcaggaacagaaaaccaagca
ccgcacgttctcacttgcacgtatacctgcaacggacttggaaaagctgctgacacaaag
gaagctcacatcacaaacacctggcttttaatatctagctcagagtttggcgaaataaac
ttgcagcagctccaggctaattccacacccccaaactcccaccagctcaaggcctctgat
ccacaagtcaccagcacctgcaaagccatctggggtgcaatggggcaatgcctctctcct
acttaa

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_3|155_aa
MDKSTTTLLPISSEFQRSQKPHLSSHNPPNPKWSNTLLDLERMICLRKQGQQWESVRKSF
LYTTKGKRTEQLLFPVQRPFVREHAHLCFPTFPIWLFFIKLNLFDPCQQAQLELPPSRHP
LALCIIVLSYGKAAGVYHTLGPQPKTRGAYVSVIP

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_3|468_bp
atggacaagtctacaacaacactgctacccatcagcagtgagttccaaaggtcacaaaag
ccacaccttagttcacacaacccaccaaacccgaagtggagcaacacactcctagacctt
gagagaatgatttgcctaagaaaacaaggacaacagtgggagtctgttagaaagagcttc
ctctatacgaccaagggaaaaagaacagaacagcttctgtttccagtgcagcgacccttt
gtgagagaacatgctcacctttgttttcctacctttccaatctggctcttcttcatcaag
ctgaacctctttgatccctgccagcaggcacagcttgagctgccaccttccagacatccc
ctagcactctgcatcattgtcctgtcctatggtaaagcagcaggtgtctaccacacactc
ggacctcagcccaagaccagaggagcttatgtctcagttattccatag

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_4|140_aa
MSYMAAGKKRMRAKQKGFPLVKPSDLVRLIHYHENSMGETIPVMQLSPTESLPQHMGIMG
ATTEDEIWDLKSEGTRYDGRNLALDSYAYSHMLLLAGTESIKTYVVILHLLTSDPIEDSV
VRAESESGKAHSRAGREAMP

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_4|423_bp
atgtcttacatggcagctggcaaaaagagaatgagagccaagcaaaaaggatttcccctt
gtaaaaccatcagatctcgtgagacttattcactaccatgagaacagtatgggagaaacc
atcccagtgatgcaattatctcccactgagtccctcccacagcacatgggaattatggga
gctacaactgaagatgagatttgggacctgaaatcagagggaacaaggtatgatggacga
aatttggcattagatagctatgcatactctcacatgttgctgcttgcagggactgagtct
atcaaaacatatgtagtaatattacaccttttaacaagtgatcctattgaggattcagtg
gtccgtgctgagtccgaaagtggaaaagcacatagcagagctggccgtgaagcaatgcct
tga

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_5|133_aa
MGTFLKAKSVISEQRPRKKTAFHRNPSQAITKGGTWCLSHTKYLELSLQSYCLKVNVAHT
EEQRKGPGVSPQKHKDSLRMSNIPYTLNISSTANTFSYPHAYSDIGKYHYKYGYAQTGKL
DLKLSCDHRLSSI

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_5|402_bp
atgggcaccttcctgaaagccaagagtgtcatttctgaacagcgtccaagaaagaaaact
gcattccatagaaatccaagtcaagcaataacaaaaggtggcacttggtgcttaagccac
actaaataccttgagttatccctacagagttactgtctgaaagtgaacgtggcccacact
gaagaacaacgaaaaggcccaggggtctctcctcagaaacacaaagattcccttaggatg
agtaacattccgtatactcttaacatctcctccacagctaatacattttcttacccccat
gcctacagcgacattggaaaataccattacaaatatggatatgctcaaactggaaaatta
gatcttaaactgtcttgcgatcatagactcagttctatttga

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_6|782_aa
MASRWNQQRKRTGRDEEAKSTRPAPDPGSRTKYPQPTPKMTPPRRGHDAAPWSSFESDTQ
LYTGQDTSSECLQQSSFKCLSLCCSLYAMEIKVEKDLKTGESTVLSSIPLPSDDFKGTGI
KVYDDGQKSVYAVSSNHSAAYNGTDGLAPVEVEELLRQASERNSKSPTEYHEPVYANPFY
RPTTPQRETVTPGPNFQERIKIKTNGLGIGVNESIHNMGNGLSEERGNNFNHISPIPPVP
HPRSVIQQAEEKLHTPQKRLMTPWEESNVMQDKDAPSPKPRLSPRETIFGKSEHQNSSPT
CQEDEEDVRYNIVHSLPPDINDTEPVTMIFMGYQQAEDSEEDKKFLTGYDGIIHAELVVI
DDEEEEDEGEAEKPSYHPIAPHSQVYQPAKPTPLPRKRSEASPHENTNHKSPHKNSISLK
EQEESLGSPVHHSPFDAQTTGDGTEDPSLTDFPRIWMTLTVLKIAEYVFCTRVQTMGYNP
TQLAAQVGPALAVESSFSRLLCPFDISLILPKIKFTKPDISIEDVAKKLDEMWNNLNDSE
KEPYLTALVQSHAAMKKNLRWGEIELGSQSQTISITKAAKLKEKYEKDVADYKSRKLDGA
KGPAKVAQKQVEEEDEEDEEEDGQNKKIPMLDSKSGKELELDKLAFADTQAAGRGEEHIA
EDTSSWTARGCGWEHARGRAHDRSQHADRPRLAEGGTVGGVWPGQSEESPGSLAAQLQGK
TISLLAPPSAESYFYSVKPCTRSSSPDLSSGALKKPATSPFHTLQGGQGNISRFTEKGIP
GW

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_6|2349_bp
atggcttctagatggaatcagcagcggaaaagaacaggaagagatgaagaagcaaaatca
acaagaccagcaccagatccaggttctagaacaaagtatcctcagcccacacccaaaatg
acacccccaaggagaggtcacgatgctgccccctggagttcatttgaatctgacacgcag
ctgtacactggccaagataccagctcagaatgcttgcaacagtctagtttcaaatgtctg
tctctttgttgctctttatatgccatggaaattaaagttgaaaaagacttgaagactgga
gaaagtacagttctgtcttcaatacctctgccatcagatgactttaaaggtacaggaata
aaagtttatgatgatgggcaaaagtcagtgtatgcagtaagttctaatcacagtgcagca
tacaatggcaccgatggcctggcaccagttgaagtagaggaacttctaagacaagcctca
gagagaaactctaaatccccaacagagtatcatgagcctgtatatgccaatcccttttac
aggcctacaaccccacagagagaaacggtgacccctggaccaaactttcaagaaaggata
aagattaaaactaatggactgggtattggtgtaaatgaatccatacacaatatgggcaat
ggtctttcagaggaaaggggaaacaacttcaatcacatcagtcccattccgccagtgcct
catccccgatcagtgattcaacaagcagaagagaagcttcacaccccgcaaaaaaggcta
atgactccttgggaagaatcgaatgtcatgcaggacaaagatgcaccctctccaaagcca
aggctgagccccagagagacaatatttgggaaatctgaacaccagaattcttcacccact
tgtcaggaggacgaggaagatgtcagatataatatcgttcattccctgcctccagacata
aatgatacagaaccggtgacaatgattttcatggggtatcagcaggcagaagacagtgaa
gaagataagaagtttctgacaggatatgatgggatcatccatgctgagctggttgtgatt
gatgatgaggaggaggaggatgaaggagaagcagagaaaccgtcctaccaccccatagct
ccccatagtcaggtgtaccagccagccaaaccaacaccacttcctagaaaaagatcagaa
gctagtcctcatgaaaacacaaatcataaatccccccacaaaaattccatatctctgaaa
gagcaagaagaaagcttaggcagccctgtccaccattccccatttgatgctcagacaact
ggagatgggactgaggatccatccttaacagactttcctcgtatttggatgaccttgaca
gttctgaaaattgctgagtatgtattttgtaccagggtacaaaccatgggttataatcca
acacaacttgctgctcaagttggtccagctttggctgttgaaagctcattcagtaggctc
ctgtgcccctttgacatatccctaattctgcccaagatcaaattcacaaagcctgacatc
tctattgaagatgtggcaaaaaagctggatgagatgtggaataacttaaatgacagtgaa
aaggagccttaccttactgcattagtccagtctcatgctgctatgaagaaaaacctgaga
tggggtgagattgagttggggtcacagagccaaaccatatcaatcaccaaggcagcaaag
ctgaaagagaagtatgagaaggatgttgctgactacaagtctagaaagcttgatggtgca
aaaggtcctgctaaagttgcccaaaaacaagtggaagaggaagatgaagaagacgaggag
gaagatggtcaaaacaaaaagataccaatgttggacagcaagtcagggaaggagctagaa
cttgataaactagcttttgcagacacacaagcagctggacgtggagaggaacacatcgca
gaagacacaagcagctggacagcgagaggatgtggatgggagcacgccagaggaagagca
cacgacagatcccagcatgccgacaggccacgactggcggaaggaggaacagttggcgga
gtttggccggggcaatcagaggagagcccaggcagtctagcggcccaactccaggggaaa
accatctcccttctggctcccccatctgctgagagctacttctactcagtaaaaccttgc
actcgttcttcaagcccagatttgagcagtggggcactgaagaagccagccacatcccca
ttccacaccctgcaagggggacaagggaacatttcccgtttcactgagaagggcattcca
ggctggtaa

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_7|469_aa
MAVSGFTLGTCILLLHISYVANYPNGKVTQSCHGMIPEHGHSPQSVPVHDIYVSQMTFRP
GDQIEVTLSGHPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSA
SKKTEIKVYWNAPSSAPNHTQFLVTVVEKYKIYWVKIPGPIISQPNAFPFTTPKATVVPL
PTLPPVSHLTKPFSASDCGNKKFCIRSPLNCDPEKEASCVFLSFTRDDQSVMVEMSGPSK
GYLSFALSHDQWMVGRIYKHSQQPLITYEKYDVTDSPKNIGGSHSVLLLKVHGALMFVAW
MTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRGGWSR
SISFHTSLLVVAAMFLGMDLPGLNLPDSWKTYAMTGFVAWHVGTEVVLEVHAYRLSRKVE
ILDDDRIQILQSFTAVETEGHAFKKAVLAIYVCGNVTFLIIFLSAINHL

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_7|1410_bp
atggcagtttctggatttactcttggtacctgcatacttctgttgcacattagttatgtg
gctaattatcccaatggaaaagtaacacagtcatgccatggaatgattcctgaacatggt
catagtccacagtctgttcctgttcatgacatttacgtgagtcagatgacattcaggcca
ggagatcagattgaagttactttgtcagggcatccatttaaaggctttctcctagaagcg
cgtaatgctgaggatctgaatggccctcctattggctccttcacattgattgacagtgaa
gtgtcacaacttttgacctgtgaagatatacagggatcagcagtgagtcacagaagtgca
tctaaaaaaacagaaattaaagtctactggaatgctccaagcagtgctccaaatcacaca
cagtttctagtcacagttgttgagaagtataaaatctactgggtgaagattcctggtcct
ataatttcacaaccaaatgcatttccttttacaacacctaaagctacagtagtacctttg
ccaacgttacctcccgtttcccacttaaccaaaccattcagtgcctcagattgtgggaac
aagaagttctgtattaggagtcctttgaactgtgacccagagaaggaggcttcctgtgtc
ttcttgtccttcacaagagatgaccaatcggtgatggttgaaatgagcggccccagtaaa
ggctatttatcctttgcattgtctcatgatcagtggatggttggtcgaatttacaagcac
tctcagcaacctttgattacctatgaaaaatatgatgtgacagactctccaaagaacata
ggaggatcccattctgtactccttctgaaggttcatggtgccttaatgtttgtggcatgg
atgactactgttagcataggtgtactggttgcccggttcttcaagccagtttggtcaaaa
gctttcttgcttggtgaagcagcttggtttcaggtgcatcggatgctcatgttcaccaca
actgtcctcacctgcattgcttttgttatgccgtttatatacaggggaggctggagtagg
tccatctccttccataccagcctcctggttgtggcagcgatgttcctgggaatggattta
ccaggactgaatcttcctgattcatggaaaacctatgcaatgaccggattcgtagcctgg
catgttgggactgaggttgttctggaggtacatgcttatcggctctctcgcaaagttgaa
atattggatgatgacagaattcagatccttcagtcatttactgcagtggaaacagagggt
catgcttttaaaaaggcagtgttggcaatttatgtctgtgggaatgttacttttctcatc
atatttttatctgcaatcaaccatctatga

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_8|88_aa
MIKMLNAPMDKVDGMQEQMHRDGNSQNQKEMLEIKNTLKEVKYGLVDIKVPGPGALKPQD
LHQQSFPQPKALRPEQEVRYGFPRFLGL

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_8|267_bp
atgattaagatgctaaatgctccaatggataaagtagatggcatgcaagaacaaatgcac
agagatggaaattctcagaaccaaaaagaaatgctagagatcaaaaacactttaaaagaa
gtgaagtatgggcttgtggacatcaaggttcctggtcctggggccttaaaaccacaggac
ttacaccagcaatcctttccccaacccaaggccctcagacctgaacaggaggtgcgctat
gggttcccccggttcttaggcctttag

>gi568815597f:99546318_99794059|GENSCAN_predicted_peptide_9|97_aa
MAQIYRRSNSTIHRVEAGSSEQLQSNPPPVAMVPRVFIKPLVPFRTLPLVTPYEGLACDQ
PEAEVETWPAVNQKLKWKLLSSYHRSADVACILPNLA

>gi568815597f:99546318_99794059|GENSCAN_predicted_CDS_9|294_bp
atggcacagatttatcgaagaagcaatagtacaattcacagagtggaagcaggctcaagc
gagcagctccagagcaacccccctccggttgcaatggtccccagggtttttataaagccc
ttggtgccctttagaacccttccattggttacaccctatgaaggactggcctgcgaccaa
ccagaggctgaagtggagacttggcctgcagtcaatcagaagctgaagtggaaacttctg
tcttcttatcacaggagtgctgatgtggcctgtatactgcctaatcttgcctag