GENSCAN 1.0	Date run:  6-Nov-116	Time: 03:11:24

Sequence gi568815597r:90612315_90817195 : 204881 bp : 39.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    123    118    6                               1.05
 1.05 Term -   6847   6620  228  1  0   68   48   221 0.684  11.75
 1.04 Intr -  21984  21825  160  2  1   77   27   147 0.013   6.57
 1.03 Intr -  45656  45505  152  2  2  141    4   130 0.003   7.94
 1.02 Intr -  61851  61751  101  1  2  102   73    29 0.018   1.71
 1.01 Init -  85311  85224   88  0  1   39   83    16 0.172  -2.94
 1.00 Prom -  86748  86709   40                              -3.15

 2.13 PlyA -  86900  86895    6                               1.05
 2.12 Term -  94786  94359  428  2  2   83   48   180 0.901   7.98
 2.11 Intr -  98847  98707  141  1  0  131   50   165 0.926  16.40
 2.10 Intr -  99791  99721   71  1  2   90  100    53 0.907   4.61
 2.09 Intr - 100310 100002  309  1  0   94   24   354 0.960  24.10
 2.08 Intr - 102442 102217  226  2  1   58  110   333 0.878  28.62
 2.07 Intr - 104883 104257  627  1  0  -29  113   589 0.446  40.95
 2.06 Intr - 105605 105209  397  2  1   -1  -37   535 0.797  25.33
 2.05 Intr - 114597 114278  320  1  2   25   21   228 0.156   4.55
 2.04 Intr - 115154 115008  147  0  0   24   82   103 0.644   2.59
 2.03 Intr - 117701 117510  192  0  0   53   86   114 0.516   6.24
 2.02 Intr - 117898 117808   91  1  1   86   74    68 0.350   3.85
 2.01 Init - 120037 119972   66  1  0   63   55    75 0.434   2.82
 2.00 Prom - 120361 120322   40                              -6.45

 3.00 Prom + 124996 125035   40                              -7.05
 3.01 Init + 128600 128765  166  1  1   71  -15   199 0.177   7.74
 3.02 Term + 131866 131951   86  2  2  114   43    60 0.135   0.94
 3.03 PlyA + 133947 133952    6                               1.05

 4.04 PlyA - 134235 134230    6                               1.05
 4.03 Term - 136547 136444  104  0  2   93   34    87 0.681   1.26
 4.02 Intr - 146263 146175   89  0  2   97  110    29 0.625   4.70
 4.01 Init - 153081 152900  182  0  2   41   69   136 0.654   5.70
 4.00 Prom - 154232 154193   40                              -3.05

 5.00 Prom + 160175 160214   40                              -3.65
 5.01 Sngl + 169330 169599  270  0  0   55   39   198 0.589   6.66
 5.02 PlyA + 171957 171962    6                               1.05

 6.04 PlyA - 172884 172879    6                               1.05
 6.03 Term - 177173 177123   51  2  0  103   54    83 0.594   2.85
 6.02 Intr - 178379 178270  110  0  2   72   93    73 0.343   5.28
 6.01 Init - 197953 197830  124  1  1   79   80   153 0.984  12.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  45656  45474  183  2  0  141   39   158 0.916  12.76


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:90612315_90817195|GENSCAN_predicted_peptide_1|242_aa
MCLFNKNGSEGRCQELTPLFIGSYILNCIRSASGNPTVMGRILRWPSTFAGICTYRIPSS
RALMGTTQTVSSLSYSPREEKNDHQWPMAVAAKPHQEPASCSGENAALPAHGFRCSCSGQ
FHTSSHSPCADNATLHMYAVRLPAFFPRAFFDATKACTIPMQVQPNGAMEIMLDKKQIRA
IFLFEFKMGCKAAESTHNNNTFGPGTANKRTVQWWFKKFCKGDESLEDEEHCGQPSEVDN
DH

>gi568815597r:90612315_90817195|GENSCAN_predicted_CDS_1|729_bp
atgtgtctctttaataagaatggaagtgaaggcagatgtcaggaactgactccacttttt
attggatcctatattctaaattgtattagatctgcttctggaaaccccacagtgatgggt
agaattctaagatggccttcaacattcgctggcatatgcacctatagaattccctcctct
cgagcattgatgggaaccactcagactgtgtcctctctctcttactctcccagagaagag
aagaacgatcatcaatggccaatggcagttgcagcgaagccacaccaagagccggcttca
tgctcaggagagaacgctgcacttcctgctcatggtttccgctgtagctgcagtggacag
ttccacacaagttcacactcaccttgtgctgacaatgccacacttcacatgtatgctgta
cgtcttcctgctttcttccccagggctttctttgatgccacaaaagcctgcacaattccc
atgcaagtgcagcccaatggggctatggaaataatgttagacaaaaagcaaattcgagca
atttttttattcgagttcaaaatgggttgtaaagcagcagagtcaactcacaacaacaac
acatttggcccgggaactgctaacaaacgtacagtgcagtggtggttcaagaagttttgc
aaaggagacgagagccttgaagatgaggagcattgtggccagccatcggaagttgacaat
gaccattga

>gi568815597r:90612315_90817195|GENSCAN_predicted_peptide_2|1004_aa
MPPSVITQEKAHEEDPRNQEDGKCCRHLLQITDKKLCCIDERKYRRLSVSPSALSMLDIS
SQIFYTKATNLMSGSGKALINIIYECCLIQLQRPRNQNKQIFEGFSGTKRQRPREKGSKL
DRKPTVLEAQSSAFKWPQAQGEGAVQKILCFCSLWISRACRGTVLAVPRFRGLLAPRLAC
HLLPEAQLGAPRWRESAPCLGRLTQAAKEQEGEPLEEAQAAMRRAGRKSIFIGLAFLLTE
LFANDIYLTVFDSSYEHISGKQDLYSLRLKLPRPESPGIASPPLPPSVPAPSRRPPLPPP
PRVAATAAAVSAPQLSKKVQKLGYGAAEWRAAATSGAAGEFRGRAAARASRSLHLPRPPP
PPLPPGARLWADPGSGGGGGFGVASRRLRLRLRLRLRLRLRLRLAMTMEGASGSSFGIDT
ILSSASSGSPGMMNGDFRPLGEARTADFRSQATPSPCSEIDTVGTAPSSPISVTMEPPEP
HLVADATQHHHHLHHSQQPPPPAAAPTQSLQPLPQQQQPLPPQQPPPPPPQQLGSAASAP
RTSTSSFLIKDILGDSKPLAACAPYSTSVSSPHHTPKQESNAVHESFRPKLEQEDSKTKL
DKREDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQK
YLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPY
FYHPSLLGSMDSTTAAAAAAAMYSSMYRTPPAPHPQLQRPLVPRVLIHGLGPGGQPALNP
LSSPIPGTPHPRNRAGNLPHSSVTGENADPTQSATRVFLGQRGSEALGSDDNAGRGWAAG
GRSSSLAAVLLPAAERRRGRTASRSALGEPPPRPPQAEQKRSRGSSPAGRAGPRPCSPPR
LSARALSLQIWVSPSSCYYLVWDSESPLRELRRKKRTFARARLNLIYDKRALSLCGADGF
PPPPTPIPAVRLHSLVKRPSVWLSSRLLLTIRIHVAARDLARRP

>gi568815597r:90612315_90817195|GENSCAN_predicted_CDS_2|3015_bp
atgcctccttctgtcatcacacaggaaaaagcacatgaagaggatcccaggaatcaggaa
gatgggaaatgctgcagacacttattgcaaattactgacaaaaagctctgctgtattgat
gagaggaagtacaggcggctttcggtgtccccgtcagctttaagcatgttagacatttct
tcccagattttttacacgaaggccactaatttgatgtcaggctccggcaaagctctcatc
aatattatctacgagtgctgcctaatacagctccaacgcccgaggaatcaaaataagcaa
atctttgaaggtttttcaggcaccaaaaggcagagaccgagagagaaaggctccaaactt
gaccgaaaacctactgtcttggaggcacagagctctgccttcaaatggccacaggcccag
ggagagggagcggttcagaaaatactgtgcttctgctccctgtggatttccagggcctgc
cgagggactgtgctggccgttccgcgtttccgcggcctccttgccccacggctggcctgt
catcttctgcccgaggctcagctcggggctccaaggtggcgggagtcagcaccatgcctg
ggacgtctgacccaagcagcaaaggagcaggaaggagaacctctggaggaagcgcaggca
gccatgcggagggcggggaggaaaagcatatttattggattggcatttctcttaacagag
ctcttcgctaatgatatttacttaactgtatttgacagcagttacgaacacatctccggt
aaacaggatctatactccttgcgcctaaaactgcctcggccggagtcgcccggcatcgcg
tctccgccgcttcctccttctgtgcctgctccttctcgtcgtcctcctcttcctcctcct
cctcgggttgccgcaaccgctgcggccgtgtctgccccgcaactttccaagaaagttcag
aaactcggctacggggctgccgagtggcgcgcggctgccacctcgggagccgcgggggag
ttccgagggcgcgcggccgcccgggcttcgcggtcgctgcacctgccgcgtccgccgccg
ccaccgctgccgcccggtgccaggctgtgggcagaccccggcagcggcggcggcggcggc
tttggcgtagcttcccgccgcctgcgccttcgccttcgcctgcgccttcgccttcgcctt
cgccttcgcctggcaatgacaatggaaggggccagcgggtcgagttttggaatagacacg
attttgtccagtgccagttcaggcagcccaggcatgatgaatggagatttccgcccgctc
ggtgaggccaggaccgcggattttaggagtcaggccaccccatctccctgttcggagatt
gataccgtagggacggcgccttcttctcctatctcagtcaccatggagcccccggagccg
catctggtagcagacgcgacccagcatcatcaccacctccaccacagccagcagccgccg
ccgccggccgcggccccgacgcaaagtttgcagcctttgccccaacagcagcagccgctg
ccgccacagcagccgccgccgccgcccccccagcagctgggctcggccgcctcggccccc
aggacttccacgtcttcttttttaattaaggacatcttgggcgacagcaaacctctggcg
gcatgtgcaccctacagcaccagcgtatcctctccccaccacaccccgaagcaggagagc
aacgcagtgcacgagagcttcaggccaaagctcgagcaggaggacagcaagaccaaactc
gacaagcgggaggattcccagagcgacatcaaatgccacgggacaaaggaggaaggagac
cgggagattacgagtagccgtgagagtccccctgtgagagccaagaagcctcgaaaagca
aggacagctttttccgaccaccagctcaatcaactggagcgtagctttgagcggcagaag
tacctgagcgtgcaggatcgcatggacctggctgcagcgctcaacctcactgacacccaa
gtcaagacctggtaccagaaccgcaggaccaagtggaagcggcagacagcggtgggcctg
gagttgctggccgaggcagggaactactcggcgctgcagaggatgtttccatcgccttat
ttctatcacccaagcctgctgggcagcatggacagcactacggcggcggcggctgccgct
gccatgtacagcagcatgtaccggactcctccagcaccccatccccagctgcagcggccc
ctggtgccccgtgtgctcatccacggcctagggcctgggggacagccagcccttaatcca
ttgtccagccccatcccaggcaccccacacccccgaaacagggctggaaatctcccccac
agcagtgtgactggtgaaaatgctgaccccacacagagtgcaaccagggtcttcctgggg
cagcgagggtccgaagcgctgggcagcgatgacaacgccggcaggggctgggcggcaggc
ggacgctcctcgagcctcgcagctgttctgctgcccgcggctgagcgccggcgaggtcgg
acagcctctcggagcgcgctcggcgagccgccgcctcggccaccgcaggcagagcagaag
cgctcccgaggcagcagccctgcaggtcgcgctgggcccaggccctgctccccaccgcgg
ctctcagcccgcgccctctccctgcagatttgggtctctcccagctcttgctactatctg
gtctgggacagcgagtcgcccctgcgggagctccgccgaaaaaagaggaccttcgcgaga
gcgagattgaacttgatttacgataaaagggccctgtcactttgtggagctgatggattc
ccgcccccacccacccccattcccgccgtcagacttcattctttagtgaagaggccctca
gtgtggctgtcctcccgcctcctcctaacgattcgcatacacgtcgcagccagggatttg
gcgcggcggccttga

>gi568815597r:90612315_90817195|GENSCAN_predicted_peptide_3|83_aa
MKIGLQLAHRAPLQEQEKGAPFELTLPGFDVYGLMSRTRVGFQCLLTLRVSTFDHNGGTS
QKPLRFQMLFRGQRGRDVPFSGS

>gi568815597r:90612315_90817195|GENSCAN_predicted_CDS_3|252_bp
atgaagatagggctgcaactggcccacagagcacctttgcaagaacaagagaaaggtgca
ccgtttgagctgactctgcctgggttcgatgtatacggcttgatgagcagaacaagagtt
ggattccagtgcctacttacccttcgagtgagcacctttgaccacaatggtggcacaagc
caaaaacccttgcggtttcagatgctgtttagaggacaacggggaagagatgtgcctttt
tctgggtcttga

>gi568815597r:90612315_90817195|GENSCAN_predicted_peptide_4|124_aa
MPDYKWKRRPNRTSSKEETTLGCKALKYQLIFLFCENASRDCKEKTFFASVDLETKGPKD
RYCSIEHFLMNLLCTNLRVFFLGNPDLQQTGKELQRSKGTIGVTANRNLNCSKSSSSGGL
LSDV

>gi568815597r:90612315_90817195|GENSCAN_predicted_CDS_4|375_bp
atgccagattataaatggaaaaggaggcccaatagaactagcagtaaagaagagactacg
cttggttgtaaagctttgaaatatcaactcatatttctattttgtgaaaatgcatccaga
gactgcaaagagaaaaccttctttgcctctgtggacttggaaaccaaaggacccaaggac
agatattgttccatagagcacttcctgatgaatctcttatgcacaaatctcagagtcttt
ttcctggggaaccctgacctacaacagacagggaaagaattacagaggagcaaagggaca
attggtgtcacagcaaacagaaacctcaactgttccaagtcctcatcttcaggaggcctt
ctctctgatgtatga

>gi568815597r:90612315_90817195|GENSCAN_predicted_peptide_5|89_aa
MLGWRSSLLLRVTKKQGLAKSRGRPKAQSAPTKLDPGKSDTGATTRVTRQPLARAFYSET
AGIKEAILVNWSIAQYLPMDRRVTGFEAM

>gi568815597r:90612315_90817195|GENSCAN_predicted_CDS_5|270_bp
atgctggggtggagaagctcattactgctcagagtaaccaagaaacagggcctggcaaag
agtagagggagaccaaaggcccagagtgctcccaccaaattggatcctggaaagtctgac
accggagcaactactagagtcactcggcagccgcttgctcgggctttttacagtgaaact
gcagggataaaggaggccattctggtgaactggagcatcgcccagtatttgccaatggat
agaagggtcacagggtttgaggccatgtag

>gi568815597r:90612315_90817195|GENSCAN_predicted_peptide_6|94_aa
MPVWFDLLPLALALAECWLGERPWMKDVLAAGTLTLTLEPGGSLTRSDGFASGSFSCAHT
SLSCCFVKKVSASPSAMTPCEDVPASPSIMTEVS

>gi568815597r:90612315_90817195|GENSCAN_predicted_CDS_6|285_bp
atgccagtctggtttgacttgcttcctctggccctggcgctggctgagtgctggctaggg
gagaggccctggatgaaagatgtcctggcagcaggaacattaacactcactcttgagcca
ggagggagtctcacgagatctgatggatttgcaagtggcagtttttcctgtgctcacact
tctctctcctgctgctttgtgaagaaggtgtctgcttccccttctgccatgactccgtgt
gaagatgtgcctgcttcgccttccatcatgactgaagtttcctga