GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:35:20

Sequence gi568815597f:84312426_84514865 : 202440 bp : 39.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13212  13323  112  0  1   79   93   216 0.903  20.66
 1.02 Term +  13391  13444   54  1  0   76   54    41 0.437  -3.92
 1.03 PlyA +  14827  14832    6                               1.05

 2.02 PlyA -  15512  15507    6                               1.05
 2.01 Sngl -  25079  24684  396  2  0  100   48   152 0.601   8.41
 2.00 Prom -  29190  29151   40                              -6.55

 3.09 PlyA -  29502  29497    6                               1.05
 3.08 Term -  32951  32523  429  2  0   70   32   192 0.006   6.12
 3.07 Intr -  50732  50604  129  2  0   33   68    89 0.013   1.37
 3.06 Intr -  55315  55232   84  1  0   91   94    80 0.127   8.00
 3.05 Intr -  56351  56061  291  2  0   28   81   103 0.309   0.01
 3.04 Intr -  57602  57479  124  1  1  110  115   138 0.965  18.37
 3.03 Intr -  60512  60427   86  2  2  159   70    20 0.968   5.00
 3.02 Intr -  62523  62460   64  2  1   71   75    59 0.276   0.70
 3.01 Init -  80809  80754   56  1  2   59   98    46 0.358   3.51
 3.00 Prom -  81404  81365   40                              -5.55

 4.10 PlyA -  81542  81537    6                               1.05
 4.09 Term -  91093  91025   69  1  0   92   42   127 0.620   5.46
 4.08 Intr -  92013  91739  275  1  2   63   26   285 0.411  16.13
 4.07 Intr -  94183  94141   43  1  1  105  116    -2 0.418   1.19
 4.06 Intr -  99630  99554   77  1  2   87   91    88 0.908   7.32
 4.05 Intr - 100174 100057  118  1  1   30   65    82 0.867  -0.78
 4.04 Intr - 101562 101381  182  1  2   51   73   178 0.900  11.27
 4.03 Intr - 104720 104669   52  2  1   69  127    42 0.107   3.76
 4.02 Intr - 115467 115303  165  0  0   89   85   106 0.016   9.64
 4.01 Init - 121075 120953  123  1  0   96  -39   116 0.021  -0.08
 4.00 Prom - 128613 128574   40                              -3.65

 5.00 Prom + 129918 129957   40                              -4.05
 5.01 Sngl + 131685 132020  336  2  0   52   41   261 0.966  13.58
 5.02 PlyA + 132071 132076    6                               1.05

 6.00 Prom + 136339 136378   40                              -4.35
 6.01 Init + 143245 143318   74  0  2   87   92    21 0.509   2.99
 6.02 Intr + 144786 144851   66  0  0   88   56    85 0.345   2.40
 6.03 Intr + 150902 151072  171  2  0  107   -6   106 0.511   1.24
 6.04 Term + 151277 151544  268  2  1   18   49   226 0.386   5.68
 6.05 PlyA + 152593 152598    6                               1.05

 7.00 Prom + 159318 159357   40                              -5.35
 7.01 Init + 166857 167288  432  2  0   95   39   416 0.567  33.66
 7.02 Intr + 168531 168587   57  2  0   93   94    53 0.858   4.56
 7.03 Intr + 170490 170570   81  2  0   90   80   147 0.971  13.02
 7.04 Intr + 177208 177303   96  0  0  133   49    84 0.992   8.29
 7.05 Intr + 177894 178047  154  2  1   94    7   134 0.636   4.62
 7.06 Intr + 182948 183030   83  0  2   58  115    59 0.988   4.04
 7.07 Intr + 183457 183638  182  0  2   90   94    40 0.986   2.54
 7.08 Intr + 183819 183945  127  0  1   80   95    77 0.950   7.36
 7.09 Term + 185117 185212   96  1  0   44   43    42 0.276  -7.71
 7.10 PlyA + 185221 185226    6                               1.05

 8.03 PlyA - 185922 185917    6                               1.05
 8.02 Term - 186123 186070   54  0  0  125   48    43 0.028   0.58
 8.01 Init - 193666 193586   81  1  0   77   61   121 0.103   9.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  54214  54395  182  2  2   66   47   174 0.890   7.89
S.002 Init + 111611 111855  245  1  2   51   80   225 0.848  15.25
S.003 Term + 115293 115527  235  0  1   43   49   142 0.885   0.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_1|55_aa
XSMENGRPPDPADWAVMDVVNYFRTVGFEEQASAFQEQWAEGSEEEEDQRAGRNQ

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_1|168_bp
nnttccatggaaaatgggagaccacctgatcctgcagactgggccgtgatggatgtcgtc
aattatttccgaaccgtgggatttgaggagcaagctagtgcttttcaggaacagtgggca
gaagggagtgaggaggaagaggaccaaagagcagggaggaatcagtga

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_2|131_aa
MAERDQCRAWVVASEGASLKLWQLPCGVEPASAEKSRIEVWESLPRFQKMYGNAWMSRQK
FAARVGLSWRISARAVWREMWGGSSHIESLLRHHLVELREEGHHPPDPRMVDPLTACTVH
PEKPQTLNTSP

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_2|396_bp
atggctgaaagggaccaatgtagagcttgggtcgtggcttcagagggtgcaagcctcaag
ctttggcagcttccatgtggtgttgaacctgcgagtgcagagaagtcaagaattgaggtt
tgggaatctctgcctagatttcagaagatgtatggaaatgcctggatgtccaggcagaag
tttgctgcaagggtggggctttcatggagaatctctgctagggcagtgtggagggaaatg
tggggtgggagctcccatatagagtccctactgaggcaccacctagtggagctgagagaa
gagggccaccatcctccagaccccagaatggtagatccactgacagcttgcaccgtgcac
ccagaaaagccgcagacactcaataccagcccatga

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_3|420_aa
MTEVLEKGMVCAGAALGVGHVATLGNMYDYRLHFTDDKIKVPMNQVRPFSFSRKNKSLYR
YQLRQIYPLDTIRDLVMEKSAGPYDKGEYLTSVQKTLCDIQVLSLSRVPAAFLWLCLPPL
GEESVGPQQHTLQRPMHSPEFPVQIALRLLRERGQISSRDLSSRGRIMLLVFTLRPESRQ
RGRCLQEVWMALDMQAGVSTPVSPREKIEDMEISLPNIHYFNIDMSKMGLINKEEYFHGG
IVQVVPSPRAAGEAVSMAFNGAGCHVGLVVLVAKILPEFKTFSNTNSVFHKHQNTPASYE
NLPVKEHSSNFLPMMWRNLMKQSFSASFFPLTSSSTFFVTTLLPFTVWLQMVTSLKFLSL
LLTKGSNVSEVEVLALEPRDKKVENPVSNMGATSKMEEWNLLALPTRPREKSSPENPENA

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_3|1263_bp
atgactgaagtgctagaaaaagggatggtttgtgcaggggcagctcttggtgtgggacat
gtggcaactctaggaaatatgtatgattatcgtctccattttacagatgacaaaatcaag
gtacccatgaaccaagttcgtcccttctccttcagcagaaaaaacaaaagcctttataga
tatcaacttaggcagatctatcccttggacaccattcgggaccttgtcatggagaaatct
gctgggccctatgacaaaggtgaatacttgacctctgtgcagaagaccctctgtgatatc
caggtgctctccctgagccgagttcctgcggccttcctctggctgtgcctccctccacta
ggtgaagaatcagtggggccacagcaacatactctgcagaggcccatgcattccccagaa
tttcctgtccaaatagccctgagactacttcgggaacgtgggcaaatctcttctcgagat
ctgtcttccagagggcgaatcatgctattggtgttcacccttaggcctgagagtaggcaa
aggggcagatgtttgcaggaggtatggatggcacttgacatgcaagctggagtgtctacc
cctgtgagtccaagagagaagatagaagatatggaaatcagcctgccaaacattcactac
ttcaacatagacatgtccaaaatgggtctgatcaacaaggaagagtactttcatggagga
atcgtgcaagtagttccaagcccacgtgctgccggggaggcagtttccatggcattcaat
ggagcaggctgtcatgtggggcttgtggttttggtagccaagattctgcctgagttcaaa
acattctcaaacaccaattcagtctttcataagcatcagaacaccccagcctcatatgaa
aatctccctgttaaagaacacagcagcaacttcttaccaatgatgtggaggaatctcatg
aaacagtctttttctgcttcattcttccccctcacatcttctagcactttctttgtaaca
actctcttgccatttactgtctggctacaaatggtgaccagtctgaagtttctcagtctg
ctgcttacaaagggttcaaatgtctcagaggtagaggtacttgctctggagcccagagat
aaaaaagtggaaaatcctgtgtccaatatgggagccacatcaaagatggaggagtggaat
ctcctggctttacccacaaggccaagggaaaaatcatcacctgagaatcctgagaatgca
tag

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_4|367_aa
MVSFSDSAGAKPIKRGWQHRQQGASGNRALIWLLLCDLGQNSPDGKMVGLACLRSYWAEE
WTEVGCKSDFLDIGKQLACSMYQSLLGHQTLLHLTEVLQQGVTITKIYQHPYHGVTHGSG
KEFGEDTIHVSVIKDLELTEFDGLIEGSEKEEMGSDWVTMQNTRKSRFVGDDDASVQQQN
YTACCLMMVFHTVKKRIRLCKMEEFLSLGRLKCDELTENLHHTPKIMKFVIDEIDIRTQN
QSLKTLHVAGFTKGKAMKAIKPKTIHSCWKNLCSDVEHDFTGFMTESIKKVMKEIVDMAR
KVGGDGFQDMIPGEIQKLIDTTLEKLTEHNSMEPEPDDEQEDIEELTQQEDDKDEDTYDD
PFPLNEE

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_4|1104_bp
atggtgtccttctcagactcagctggagcaaagcctatcaagcgagggtggcagcatcgt
caacagggagcatcgggcaaccgggctctcatctggcttctgctctgtgatctcggacag
aacagccctgatgggaagatggttggactggcctgcctccgttcctactgggccgaggaa
tggactgaggttggctgcaagtctgactttttggatatagggaaacaactggcttgcagc
atgtaccagtctctccttggtcaccagacactgctccatctcacagaggttctacaacaa
ggagttaccatcaccaaaatataccaacacccctaccacggtgtgacccatggcagtggc
aaagagtttggagaagatacaatacatgtgagtgttattaaggatctggaactgactgaa
tttgatggtttgatagaagggtcagaaaaagaagagatggggagtgactgggtaactatg
cagaatacaagaaaaagtagatttgtaggggatgatgacgcatcagttcaacagcagaat
tatacagcatgttgtttgatgatggtctttcataccgtcaagaaaagaatccgactttgc
aaaatggaggaatttttgtccctgggccgactgaagtgtgatgaattaactgagaattta
catcacacacccaagattatgaagtttgtaattgatgaaattgatattcgaacccagaac
caatcactcaagacattgcatgtggcaggttttactaaaggaaaagccatgaaagccatc
aagcccaaaacaatacattcctgctggaaaaatctgtgttcagatgttgagcatgacttc
acaggatttatgacagagtcaatcaagaaagtcatgaaagagattgtggatatggcaaga
aaggttgggggtgatggatttcaagatatgattcctggagaaattcaaaagctaatagac
accacactagagaaattaacagaacataactcaatggaaccagagccagatgatgagcaa
gaagacatagaagagctgactcaacaggaagatgacaaggatgaagacacttatgatgat
ccatttccacttaatgaagagtga

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_5|111_aa
MRKNQYKKAENSKNQNTSSPKDHNSSSAREQTWTESEFDEFTEVGFRRWVITNSSELKEH
VLTQCKEVKTLEKRLEELLTRITSLEKNINDLMELKNTARELSEAYTSINS

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_5|336_bp
atgaggaaaaaccagtacaaaaaggctgaaaattccaaaaaccagaacacctcttctcca
aaggatcacaactcctcatcagcaagggaacaaacctggacagagagtgagtttgacgaa
ttcacagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggagcat
gttctaacccaatgcaaggaagttaagacccttgaaaaaaggttagaggaattgctaact
agaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacacagcacga
gaacttagtgaagcatacacaagtatcaacagctga

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_6|192_aa
MNKNTKWSYRVQNISYLHHEDSGKRLVAKGEEKESEEGLQVLRAKQIIAIKAPKLKTIYI
KEPPSFKENQWATERQQNWRSSSKHQSPILSSSLLRYLHIMCCTRKTSIGEQKEVAPVEM
LLGLEQDAWIFQKTLKKKAKLEVNCWYLPKGAVHQVMGPQHQEAREHIAKEGVRRGGLSR
IRELCRGPCMAS

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_6|579_bp
atgaacaagaatacaaagtggtcctatagggtccagaatataagttacctccatcatgag
gatagtggtaagaggttggtggctaagggagaagagaaggagagtgaagaaggtctacag
gttctgagagcaaagcaaataattgccatcaaagctccaaagctgaagacaatatacatc
aaggaacccccatcatttaaagagaaccagtgggctactgagaggcaacagaactggcgt
tcctcctccaagcatcagtctcccatcctttcctcctccctactgcgttatctacatatt
atgtgttgtacgagaaaaacaagtattggagaacaaaaagaagtggcaccagttgagatg
ctacttggattggagcaagatgcttggattttccagaagacactgaagaagaaagccaag
cttgaagttaattgctggtacctgcccaagggggctgtgcaccaagtgatgggaccccaa
caccaagaggctagggagcacattgctaaggaaggtgtcagaagaggtggcctgtcccgc
ataagggaactgtgcagaggcccttgtatggcttcctga

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_7|435_aa
MAKAGDKSSSSGKKSLKRKAAAEELQEAAGAGDGATENGVQPPKAAAFPPGFSISEIKNK
QRRHLMFTRWKQQQRKVRERRGLPGACALFLTLRAVAGRTSVVVCWSQKCSLWLRGKGGV
AAHVFWSPRPSLETLGSAFCLSVKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYD
ETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHV
YYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEI
KRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRF
HRYIFRSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKNTLFKMAFADFINLSR
LDELPNAMNCHCVFM

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_7|1308_bp
atggcgaaagccggggataagagcagcagcagcgggaagaaaagtctaaaacggaaagcc
gctgccgaagaacttcaggaggctgcaggcgctggggatggggcgacggaaaacggggtc
caacccccgaaagcggctgcctttccgccaggctttagcatttcggagattaaaaacaaa
cagcggcgacacttaatgttcacgcggtggaaacagcagcagcggaaggtacgcgagagg
cgggggctgccgggcgcttgcgcgttgttcctgacgcttagggcggtcgcggggcgcaca
tctgtggttgtctgctggtctcaaaagtgttctctgtggctccgtgggaagggtggcgtc
gcggcccacgtgttctggtcccctcgccctagtttggagactctaggttcagccttttgc
ctgagcgtcaaggaaaagttggcagctaagaaaaaacttaaaaaagaaagagaggctctt
ggcgataaggctccaccaaagcctgtacccaagaccattgacaaccagcgagtgtatgat
gaaaccacagtagaccctaatgatgaagaggtcgcttatgatgaagctacagatgaattt
gcttcttacttcaacaaacagacttctcccaagattctcatcacaacatcagatagacct
catgggagaacagtacgactctgtgaacagctctccacagttataccaaactcacatgtt
tattacagaagaggactggctctgaaaaaaattattccacagtgcatcgcaagagatttc
acagacctgattgttattaatgaagatcgtaaaaccccaaatggacttattttgagtcac
ttgccaaatggcccaactgctcattttaaaatgagcagtgttcgtcttcgtaaagaaatt
aagagaagaggcaaggaccccacagaacacatacctgaaataattctgaataattttaca
acacggctgggtcattcaattggacgtatgtttgcatctctctttcctcataatcctcaa
tttatcggaaggcaggttgccacattccacaatcaacgggattacatattcttcagattt
cacagatacatattcaggagtgaaaagaaagtgggaattcaggaacttggaccacgtttt
accttaaaattaaggtctcttcagaaaggaacctttgattctaaatatggagagtatgaa
tgggtccataagaatactcttttcaaaatggcatttgctgatttcataaacctttcacgt
ctggacgaattaccaaatgccatgaattgccactgtgtgtttatgtag

>gi568815597f:84312426_84514865|GENSCAN_predicted_peptide_8|44_aa
MSGSSSVAAMKKVVQQLRLEAGLNRVKVSQTTPYDPVNIQESYI

>gi568815597f:84312426_84514865|GENSCAN_predicted_CDS_8|135_bp
atgtctggctcctccagcgtcgccgctatgaagaaagtggttcaacagctccggctggag
gccggactcaaccgcgtaaaagtttcccaaaccactccttatgatccagtgaatattcaa
gagagctacatttga