GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:40:09

Sequence gi568815597f:53359454_53566659 : 207206 bp : 50.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4496   4535   40                              -1.86
 1.01 Init +  16663  16950  288  0  0   66   72   137 0.815   7.02
 1.02 Intr +  17541  17683  143  2  2   85   99    15 0.642   1.45
 1.03 Intr +  21651  21685   35  0  2  100   93    31 0.628   2.67
 1.04 Term +  30138  30265  128  1  2   38   55   140 0.632   4.14
 1.05 PlyA +  31943  31948    6                               1.05

 2.07 PlyA -  33912  33907    6                               1.05
 2.06 Term -  34497  34359  139  2  1   65   55   103 0.574   2.14
 2.05 Intr -  36429  36363   67  1  1   69   94    42 0.187   0.86
 2.04 Intr -  57888  57794   95  2  2   71   45    65 0.098   0.11
 2.03 Intr -  67345  67229  117  0  0   65  109    56 0.587   4.98
 2.02 Intr -  79267  78920  348  0  0   -8   56   455 0.175  27.17
 2.01 Init -  79916  79375  542  2  2   27   17   932 0.843  74.35
 2.00 Prom -  93427  93388   40                              -1.86

 3.00 Prom +  98471  98510   40                              -6.06
 3.01 Init +  99836 100577  742  1  1   63  111   784 0.449  73.11
 3.02 Intr + 102020 102192  173  0  2   92   97   261 0.999  27.06
 3.03 Intr + 105184 105394  211  0  1  109  105   182 0.986  20.49
 3.04 Term + 107142 107209   68  1  2  121   47    58 0.934   3.10
 3.05 PlyA + 108016 108021    6                               1.05

 4.06 PlyA - 108247 108242    6                               1.05
 4.05 Term - 123090 122902  189  0  0   73   48   171 0.792   9.05
 4.04 Intr - 124343 124265   79  1  1   98   78    -3 0.682  -0.75
 4.03 Intr - 126770 126650  121  0  1   41   99    64 0.511   2.35
 4.02 Intr - 127271 127162  110  1  2  114   95   -16 0.163   1.63
 4.01 Init - 133931 133822  110  2  2   66   77    66 0.211   2.99
 4.00 Prom - 134805 134766   40                              -6.96

 5.19 PlyA - 135394 135389    6                               1.05
 5.18 Term - 147323 147166  158  0  2   90   49   218 0.625  16.20
 5.17 Intr - 149834 149667  168  0  0   89   99   195 0.999  20.62
 5.16 Intr - 150574 150396  179  0  2  130  121    55 0.998  12.56
 5.15 Intr - 154465 154184  282  0  0  127   42    49 0.333   0.73
 5.14 Intr - 155328 155172  157  1  1  100   71    92 0.948   7.77
 5.13 Intr - 158801 158700  102  0  0   50   72    59 0.567   0.65
 5.12 Intr - 161313 161181  133  0  1  108   98   269 0.999  30.12
 5.11 Intr - 165434 165324  111  2  0   99  121   202 0.885  25.18
 5.10 Intr - 165989 165888  102  2  0   75   61    50 0.586   1.37
 5.09 Intr - 170492 170338  155  0  2  -11   78   247 0.762  13.59
 5.08 Intr - 171956 171804  153  0  0  133   16   107 0.708   8.04
 5.07 Intr - 174872 174822   51  0  0   55  115    34 0.117   1.68
 5.06 Intr - 184342 184319   24  2  0   78   94    48 0.027   2.40
 5.05 Intr - 186702 186651   52  0  1   50   72    61 0.001  -0.82
 5.04 Intr - 193738 193643   96  1  0   50   75    65 0.032   1.61
 5.03 Intr - 200262 200132  131  1  2   46  101    40 0.092   1.51
 5.02 Intr - 200840 200762   79  2  1   86   93    53 0.241   4.72
 5.01 Intr - 201090 200921  170  1  2   68   94    37 0.139   1.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:53359454_53566659|GENSCAN_predicted_peptide_1|197_aa
MEEPEPLMMSSCQQPAGQGKQFCVGPLQDSQGTHTLAPSTAHQAAFLCSNRSSAVTIPEA
RSLLIQIPPGQDFPLQLCCQMAPQLCPHTSRDTESRLLTKPAFKQGWEGERQESALAAAS
PWGTKHCPSGKGREGAIQAEDEGRNKFTGSTETKNFLKAGKSKIEVLAGLVSGERLFLMD
RNFLLCLHLVEGAKKAP

>gi568815597f:53359454_53566659|GENSCAN_predicted_CDS_1|594_bp
atggaggagcccgagcctttgatgatgagcagctgccagcagccggccgggcaagggaaa
cagttctgcgttgggccactccaggactcccaggggacacacactcttgccccctccacc
gcccaccaggcggccttcctctgctctaacagaagtagtgctgtgactattccagaggct
cggagcctgctaatacagattccacccgggcaggacttcccactacagctttgctgccag
atggcgccccagctgtgccctcacacctccagggacacggagagcaggctcctcactaaa
cctgccttcaagcaaggatgggaaggagagcggcaggaaagcgccctggctgctgcctcc
ccttggggcacaaagcactgcccctccgggaaggggcgagagggagcaatccaggcggag
gatgaaggcaggaataagttcactggaagcacagaaacaaagaactttctgaaggctgga
aagtccaagattgaggtgctggcaggtttggtgtctggcgagcgcctgttccttatggac
cgcaacttcttgctgtgtcttcatttggtggaaggagcaaagaaggccccctga

>gi568815597f:53359454_53566659|GENSCAN_predicted_peptide_2|435_aa
MIPSRPPSAAGEKRGPRRQQTLGGGCGGGQRGVRLGPVPAAVRPGRDAELRLTHTAIVSL
HLVKCRMQVDPGWYKGVLSGFGVTVHSDGLCGLARGCAQTFFGYSLQGFFKFGLYEVFKI
RSAELLGPEKAYGWRAGLYLFAWASAEFFPDVSLEPMEAVKVRVQTRPGYASTLRATASR
IGPLQVCRAQAPEPVHQGQAAGHHLRGVFCAVVSHPADSVVSVLNKEKGIAALGVLRRLG
FTGVWKGVVARIGLFAHIPMIGTLTALQWFIYDLVKVYFKLPRPPVAQAPEPLKKKKASE
AIGQCQSSAVKLRRSGKESVREPWARVPGALGVAVRPLPIHPMSVTELFYGAPSLSLETV
AVLLLGSGTGDKGRAHSGGVAEPAADNYDRAPVRASSRVTHRSTLQIVFTYYDLSQATCE
VSKHFNPILQGQAAP

>gi568815597f:53359454_53566659|GENSCAN_predicted_CDS_2|1308_bp
atgatcccctcgcggccgccgagcgctgcaggcgagaagcgtgggccaaggcgtcagcag
accctgggcggcggctgtggaggaggccagcgtggagtacggctcggcccggtacctgct
gctgtgcggcctgggcgggatgctgagctgcggctgacacacacggccatcgtgtccctg
cacctggtcaagtgccgcatgcaggtggaccccggctggtacaagggcgtcctcagcggc
ttcggcgtgacggtgcacagcgacgggctgtgcggcctggctcgcggctgcgctcagacc
ttcttcggctactccctgcagggcttcttcaagttcggcctttacgaggtcttcaagatc
cgctccgcggagctcctgggcccagagaaagcctacgggtggagagccggcctgtacctt
ttcgcctgggccagcgccgagttcttccccgatgtctcgctggagcccatggaggcggtc
aaggtccgcgtgcagacgcgaccgggctacgccagcaccctgcgagccacggcgtccagg
ataggacctctacaggtatgccgtgcccaagccccagagccagtgcaccaaggccaagca
gctgggcatcaccttcgtggcgtcttctgcgctgtcgtgtcccatcccgccgactccgtg
gtgtctgtgctgaacaaggagaagggcatcgcggccctgggcgtcctccgaagactgggg
ttcacgggcgtgtggaagggcgtcgttgcgcgcatcggcctctttgcgcacatccccatg
atcggcaccctcacggccctgcagtggtttatctatgacctggtcaaggtctatttcaag
ctgcctcgccctcccgtggctcaagcgcccgaacccctgaagaagaaaaaggcttccgag
gcgatcgggcagtgtcagtcttcagctgttaagctgagaagatctgggaaggagtcagtc
agagagccttgggccagagttccaggagctctgggagtggctgtcaggccattgcccatt
caccccatgtctgtcacggagctcttttatggggcaccttcactgagccttgagactgtg
gccgtcctgcttctaggctctggcactggggacaagggcagagcacactctggtggggta
gcagagccagctgcagacaattatgacagggcacctgtgcgagcatcatctcgagtgaca
cacagaagcaccttgcaaattgtgttcacctattacgatctgtcgcaggctacctgcgaa
gtcagcaagcacttcaaccctattttacagggccaagcagcaccttga

>gi568815597f:53359454_53566659|GENSCAN_predicted_peptide_3|397_aa
MQGSCCSSRDTLRAALLQVYPMSPERGTCGARLIPAPLALQLPEVVVVLRRLTLPMADKM
VRTPKCSRCRNHGFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQKVLKTQAAEEEQ
EAALCAQGPKQASGAAAAAPAPVPVPAASLRPLSPGTPSGDADPGPEGRAAACFFEQPPR
GRNPGPRALQPVLGGRSHVEPSERAAVAMPSLAGPPFGAEAAGSGYPGPLDLRRPMRTVP
GPLFTDFVRPLNINPDRALGPEYPGGSSMHPYCPFPLGYLDAPPGVPLQQGFRHVSRSQY
QGGGLVSEPGGDFQPSYYLPPPPPPLPPLPPLPPQPQFLPPGYLSALHFLPPPPPPPPPS
SFSLTVLFDTDKENTDDQDAEVLSGEPSQPSSQEQSD

>gi568815597f:53359454_53566659|GENSCAN_predicted_CDS_3|1194_bp
atgcaaggttcctgctgcagttcccgggacacactgcgagccgctttgttacaagtgtat
ccaatgtccccagaacgagggacttgtggggcgcggctcatcccagcgccacttgctctg
cagctcccagaggtggtggttgtgttacgaaggctgaccctgccaatggccgacaaaatg
gtgcgcacccccaagtgctcgagatgcaggaaccatggcttcctggtgcccgtcaaggga
cacgcgggcaaatgccgctggaagcagtgcctctgcgagaagtgctacctgatctccgag
cgccagaagatcatggccgcgcagaaggtgctcaagacgcaggccgccgaggaggagcag
gaggcggccctgtgtgcgcaggggcccaagcaggcctccggggctgcggccgccgccccc
gcccccgtccccgtcccggccgcgagcctccgcccgctgtccccggggactccctccgga
gacgccgacccgggacccgagggccgcgcggccgcttgcttcttcgagcagcccccgcgg
ggccggaaccccggcccgagagccctccagccggttctgggcggccgcagccacgtggag
ccgagcgagcgagccgccgtggcgatgcccagccttgcgggacccccttttggggcggag
gccgcaggcagtggctaccctggccccctagacctgcgcaggccgatgcggaccgtgccc
ggcccactgttcaccgactttgtgcgccctctgaacatcaacccggaccgtgcactgggc
cctgagtaccctggtggctccagcatgcacccctactgcccgttcccgctgggctacctg
gacgcccctcctggcgtccccctgcagcagggcttccggcatgtgtcccgcagccagtac
caaggcggaggcttggtgtcagaaccaggaggagacttccagccaagctactacctgccg
ccgccgccgccgccactgccgccccttccaccgcttccaccgcagccccagttcctcccg
ccaggctacctctctgcgctccacttcctccccccgccaccgccaccaccacctccatca
tctttctcactgaccgtcctgtttgatactgacaaggagaacactgatgaccaggatgca
gaggtactgtcgggtgagcccagccagccatcgtctcaggagcagtccgactag

>gi568815597f:53359454_53566659|GENSCAN_predicted_peptide_4|202_aa
MLSVMNHHGNASQNRSGMHFITAGMAIIKRSDTKHCCLASCFQAFVRAVPSVRSTLPSSF
PGAMITLHSLLAVAPNPGPVWFLTGYSQQIEKKQPTLAPEPRVQPSLQRGFSGRGCSLTA
AQERALLSFHSQRSQLREGERNLHAHMPEEEHENPRMPPEYPVAEKAAAHNTTPWVNVSN
VIFSEEASPQRLHPKTAVQKTI

>gi568815597f:53359454_53566659|GENSCAN_predicted_CDS_4|609_bp
atgctcagcgtcatgaaccatcatggaaatgcaagtcaaaatcgcagtgggatgcacttc
ataaccgctgggatggccatcatcaaacggtcagatactaagcactgttgccttgcctct
tgcttccaggcctttgtccgtgctgttccttctgtccggagcactcttccttcaagcttc
ccaggtgcaatgatcacattgcactcattgcttgctgtagctcctaaccctggtcccgtg
tggtttctgactgggtactcgcagcaaatagagaagaaacagcccaccctagccccagag
cccagagtgcagccttccctgcagcggggattttcaggcagaggctgcagcctcacagca
gcccaggaaagggcactgctatcattccactcgcagagaagccagcttagagaaggggag
cgtaacctgcatgcccacatgccagaggaagagcacgagaaccccaggatgcccccagag
taccctgtagcagagaaggcagcagcacacaacaccacaccatgggtgaatgtgagcaac
gtcatattcagtgaggaagcctcgccccaaagactacatcctaaaacagctgttcaaaag
accatctag

>gi568815597f:53359454_53566659|GENSCAN_predicted_peptide_5|767_aa
XSTLPGRYEGLTGGHQGETDICSVCGPDISRPELSVCQWNPCPCKQGASSCLTREAQCWD
RDESTQLLPPGLGKAGSSLSVFAGLRPGGAGRVGEDELQQRLAGAQDQALSRIAAAGLDP
EGEQSRMVYPGFEAQCVLAKADGDGVHLHLPDEPFSASQELGGVTLRGGTHILQCIDPWD
IRDAGPMESLRCPRVVVPLPEGEPQRKDVKSRLWERQSSGNTAATSSSLATCCWEPMLAP
GSEGQGPMGPNLGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRT
HLDTIQPCFQPLTAIGRRTWFLVAPRAVRCLCTYLQGAKPYACQIPGCSKRYTDPSSLRK
HVKAHSAKEQQVRKKLHAGPDTEADVLTECLVLQQLHTSTQLAASDGKGGCGLGQELLPV
LLLCYTEHLLSARPGAGPVLELLPVQRGGQDQAGVYPGSITPHNGLASGLLPPAHDVPSR
HHPLDATTSSHHHLSPLPMAESTRDGPGPSTFLLPCPSSSWLQPWPWPACAWGQPGFIAT
FVAHCSYYYWAPPAIHSPIHSVFNYGAPVGRPWAQCWCLDDSGPGDAYCERETYHTGGQW
LGPGLLSPIVSPLKGLGPPPLPPSSQSHSPGGQPFPTLPSKPSYPPFQSPPPPPLPSPQG
YQGSFHSIQSCFPYGDCYRMAEPAAGGDGLVGETHGFNPLRPNGYHSLSTPLPATGYEAL
AEASCPTALPQQPSEDVVSSGPEDCGFFPNGAFDHCLGHIPSIYTDT

>gi568815597f:53359454_53566659|GENSCAN_predicted_CDS_5|2304_bp
ncctccactctccctggaaggtacgaagggttaactggtgggcaccagggggaaacagat
atttgctccgtgtgtggaccagatatctcccgaccggaactgtccgtctgccagtggaac
ccctgcccttgcaaacagggagcgagctcctgcctgactcgtgaggcccagtgctgggac
agagatgagtcaacacagctgctgcccccaggtctgggcaaagctggctcttctttgtct
gtcttcgctgggctgaggccagggggtgcagggcgtgtgggggaggatgagctgcaacag
aggctcgcaggggctcaggaccaggctctgtcccgcattgcagcggctgggctcgaccct
gagggggagcagagccgcatggtttatcctggttttgaagcacaatgtgtgctcgccaag
gctgatggggatggggttcatctacatcttccggacgagccattctcagccagccaggag
cttggtggcgtcaccctgcgaggaggcacccacatccttcagtgcatcgacccctgggac
atccgagatgcaggccccatggaatcattacgatgccctcgggtcgtggtgccattacct
gaaggtgagccccagagaaaggatgtgaagagcaggctttgggagcgccagtcctcgggt
aacacggctgctaccagctcatccttggccacctgctgctgggagcccatgctggcccct
gggtcagaggggcagggtcccatgggccctaatctgggctgcagcaaggccttctcacgg
ctggagaacctcaagatccacctgaggagccacacgggcgagaagccgtacctgtgccag
cacccgggttgccagaaggccttcagcaactccagcgaccgcgccaagcaccagcgcacc
cacctagacacgatccagccgtgcttccagcctctcacagctattggcaggaggacctgg
tttcttgtggccccaagagcagtccggtgcctctgcacctacctgcaaggtgcgaagccg
tacgcctgtcagatccctggctgctccaagcgctacacagaccccagctccctccgcaag
cacgtcaaggcccattcagccaaagagcagcaggtgcgtaagaagctgcatgcgggccct
gacaccgaggccgacgtcctgaccgagtgtctggtcctgcagcagctccacacgtccaca
cagctggctgccagcgacggcaagggtggctgtggcctgggccaggagctgctcccagtg
ctgctcctctgctatactgagcacctgctgtctgccaggcccggtgctggccctgtcctc
gagctgcttccagtgcagcggggagggcaggaccaggcaggtgtgtatcctggctccatc
accccccataacggacttgcatcgggcctcctgcccccagcgcacgacgtaccttccagg
caccacccgctggatgccaccaccagttcccaccaccatctgtcccctctgcccatggct
gagagcacccgggatgggcctggccccagcaccttcctccttccctgcccttcctcctcc
tggctacagccttggccatggcctgcctgcgcctggggccagcctggcttcatcgccaca
tttgtggcccactgctcctattattactgggctcctcctgccattcattcacccattcat
tcggtgttcaattatggagcccctgtgggcaggccctgggcccagtgctggtgcctcgat
gactctggccctggagatgcttactgtgagagggagacctaccacacagggggccagtgg
ttggggcccggcctcctctcaccaatagtcagccccctgaaggggctggggccaccgccg
ctgcccccatcctctcagagccattctccggggggccagcccttccccacactccccagc
aagccgtcctacccacccttccagagccctccacccccgcctctgcccagcccacaaggt
taccagggcagtttccactccatccagagttgcttcccctatggcgactgctaccggatg
gctgaaccagcagccggtggggacggactggtcggggagacccacggtttcaaccccctg
cggcccaatggctaccacagcctcagcacgcccttgcctgccacaggctatgaggccctg
gctgaggcctcatgccccacagcgctgccacagcagccatctgaagatgtggtgtccagc
ggccccgaggactgtggcttcttccccaatggagcctttgaccactgcctgggccacatc
ccctccatctacacagacacctga