GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:04:57

Sequence gi568815597f:45227149_45428261 : 201113 bp : 43.82% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  15804  15843   40                              -1.16
 1.01 Sngl +  58443  58736  294  2  0   88   54   270 0.984  19.30
 1.02 PlyA +  59322  59327    6                               1.05

 2.00 Prom +  59857  59896   40                              -4.96
 2.01 Sngl +  59950  60852  903  0  0   49   49   247 0.992  13.12
 2.02 PlyA +  61260  61265    6                               1.05

 3.00 Prom +  63079  63118   40                              -2.46
 3.01 Init +  66555  66632   78  2  0   69   72    13 0.611  -1.14
 3.02 Intr +  68915  69013   99  1  0  100   60    87 0.794   7.41
 3.03 Term +  69837  70007  171  2  0  -14   45   136 0.385  -3.07
 3.04 PlyA +  72114  72119    6                               1.05

 4.03 PlyA -  72859  72854    6                               1.05
 4.02 Term -  77955  77858   98  1  2   72   44   123 0.083   4.43
 4.01 Init -  91814  91751   64  2  1   47  111    62 0.419   5.72
 4.00 Prom -  96673  96634   40                              -4.36

 5.00 Prom +  99103  99142   40                              -6.26
 5.01 Sngl + 100001 101116 1116  1  0  106   49  1075 0.999 101.18
 5.02 PlyA + 101336 101341    6                               1.05

 6.11 PlyA - 103192 103187    6                              -0.45
 6.10 Term - 104186 103977  210  2  0   85   42   164 0.942   8.79
 6.09 Intr - 104408 104272  137  0  2  125  107   114 0.982  17.29
 6.08 Intr - 104701 104513  189  2  0   39   82   129 0.989   6.96
 6.07 Intr - 104938 104875   64  1  1  123   77    44 0.998   5.09
 6.06 Intr - 105162 105018  145  2  1   69   63   124 0.996   8.28
 6.05 Intr - 105340 105243   98  1  2   80   62   142 0.984   9.61
 6.04 Intr - 105539 105426  114  2  0   57   58   159 0.999  10.44
 6.03 Intr - 105686 105615   72  2  0   90  116    52 0.995   7.80
 6.02 Intr - 106022 105949   74  0  2   70   62    88 0.917   3.53
 6.01 Init - 107357 107243  115  2  1  100   91    72 0.910   9.08
 6.00 Prom - 110860 110821   40                              -6.46

 7.00 Prom + 111031 111070   40                              -9.75
 7.01 Init + 113105 113156   52  1  1   84  101    79 0.851  10.13
 7.02 Intr + 113925 114195  271  1  1   85  100   189 0.818  16.40
 7.03 Intr + 114325 114421   97  1  1   22   86   113 0.909   4.51
 7.04 Intr + 114801 114959  159  2  0   83  102   178 0.999  18.88
 7.05 Intr + 115236 115495  260  2  2  101   77   318 0.997  28.26
 7.06 Intr + 115695 115854  160  0  1   78   89   162 0.998  15.29
 7.07 Term + 115934 116554  621  1  0   91   44   308 0.992  21.12
 7.08 PlyA + 116790 116795    6                              -0.45

 8.10 PlyA - 116852 116847    6                              -3.24
 8.09 Term - 118410 117692  719  1  2   61   55   402 0.985  27.85
 8.08 Intr - 118846 118729  118  1  1   36   78   124 0.994   6.24
 8.07 Intr - 119631 119545   87  0  0   80   92    63 0.977   6.07
 8.06 Intr - 119914 119831   84  1  0   -1   83   137 0.913   4.32
 8.05 Intr - 120545 120461   85  1  1   63  115    50 0.550   5.02
 8.04 Intr - 120852 120770   83  0  2   49   89    84 0.542   3.04
 8.03 Intr - 128301 128155  147  0  0   79   86    96 0.817   8.93
 8.02 Intr - 158812 158764   49  0  1  116   94    -3 0.001   1.78
 8.01 Intr - 194698 194577  122  1  2  105   63    80 0.144   6.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 147452 147583  132  1  0   87   49   108 0.863   4.89
S.002 Term + 188039 188196  158  0  2   48   38   175 0.938   6.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_1|97_aa
MGKKQNRKTGNSKKQSASPPPKEYSSSPAKEQSWMENDFDELREEGFRRSNYSELKEEVR
TQGKEVKNLLKKLDKWLTRITNAEKSLKDLMELKTMA

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_1|294_bp
atggggaaaaaacagaacagaaaaaccggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaatatagctcctcaccagcaaaggaacaaagctggatggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaactactccgagctaaaggaggaagttcga
acccaaggcaaagaagttaaaaaccttttaaaaaaattagacaaatggctaactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccatggcatga

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_2|300_aa
MGDFYTPLSTSDRSTKQKVNKDIQELNSALHQADLIDIYRILHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKCKRTEIITNCLSDHSAIKLELSIKKLTQILSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNKNKDTTYQNLWDTFKAVCRGKFIALNAHKRKQEKSKIDTLTSQLK
EPEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKISESRSWFFEKINKIDRLLARLIK
KKREKNQIDTIKNDKGDTTTNPTEIQTTIREYYKHLCANKLENLEEMDKFLDIYTLPRLN

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_2|903_bp
atgggagacttttacaccccactgtcaacatcagacagatcaacgaaacagaaagttaac
aaggatatccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
attctccaccccaaatcaacagaatatacattcttctcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcagcattaagaaactc
actcaaatcctctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataatgaaatgaaggcagaaataaagatgttctttgaaaccaacaagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaaaatctaaaatagacaccctaacatcacaattaaaa
gaaccagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaatcagtgaatcc
aggagctggttttttgaaaagatcaacaaaattgatagactgctagcaagactaataaag
aagaaaagagagaagaatcaaatagacacaataaaaaatgacaaaggggataccaccacc
aatcccacagaaatacaaactaccatcagagaatactataaacacctctgcgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgatatatacaccctcccaagactaaac
tag

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_3|115_aa
MERSGCFQEPCKRENWQHLVTGHGYRVLAKQLQQFQDTFRLNNIPGKKRYFCLHHSHLGV
GIEAESMDELTQRVFRGRSTEDLGASVELEIQLNWKATEADTESVTAPAAEGLPV

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_3|348_bp
atggaaagaagtggatgctttcaagagccatgtaagagagaaaattggcagcacttggtg
actggacacggctacagggtgttagcaaaacagctgcagcagttccaggacaccttcaga
cttaacaacattcccgggaaaaagagatacttctgtttacatcactctcacctaggggtg
ggaattgaagctgaaagcatggatgagctcacccagagagtgttcagagggagaagcaca
gaggacctaggcgcttcagttgagctggaaatccagctcaactggaaggctacagaggca
gacaccgaatcagttacggctcctgctgcagaagggcttcctgtctga

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_4|53_aa
MRKGLTEVMGAVPEALWQYSPVTPLLMMNRMLLNPGVAGALNDFDDERLGMES

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_4|162_bp
atgagaaagggcttgactgaagtaatgggggctgtccctgaagccttgtggcagtacagc
ccagtcacccctctgctcatgatgaacaggatgctgctgaaccctggggtcgctggggcc
ttaaatgactttgatgatgagagactgggcatggagagctag

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_5|371_aa
MAAPALRLCHIAFHVPAGQPLARNLQRLFGFQPLASREVDGWRQLALRSGDAVFLVNEGA
GSGEPLYGLDPRHAVPSATNLCFDVADAGAATRELAALGCSVPVPPVRVRDAQGAATYAV
VSSPAGILSLTLLERAGYRGPFLPGFRPVSSAPGPGWVSRVDHLTLACTPGSSPTLLRWF
HDCLGFCHLPLSPGEDPELGLEMTAGFGLGGLRLTALQAQPGSIVPTLVLAESLPGATTR
QDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATAGGQFLAPPGAYYQQPGKERQIRAA
GHEPHLLARQGILLDGDKGKFLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQS
VQEQSARSQEA

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_5|1116_bp
atggccgcgcccgcccttcgtttgtgccacatcgccttccacgtgcccgccgggcagccc
ctagcccggaacctgcagcgcctcttcggcttccagcccctggcttcgcgggaggtggac
ggctggcggcagctagccctgcgcagcggcgacgcggtctttttggtgaacgagggcgca
gggtctggagagccgctgtacggcctggatccgcgtcacgccgtgcccagcgccacaaac
ctgtgcttcgacgtggcggacgccggcgctgcaacccgggagctggcagcgctgggctgc
agcgtgcctgtccctcccgttcgcgtgcgggacgcgcagggtgccgccacttacgccgtg
gtcagctcgcctgccggcatcctcagcctgaccttgctggagcgcgctggctaccgcgga
cccttcctacccggcttcaggcccgtgtcctctgcgcctggccccgggtgggtcagccgc
gtggaccacctgaccttggcctgcacccccggcagctcccccacacttttgcgctggttc
cacgactgcctgggcttttgccacttgccgctgagcccaggtgaggatcccgagctgggc
ctcgaaatgacagcagggtttgggcttgggggactgaggcttacagccctgcaggcccag
ccgggcagcattgtccccactcttgttctggctgagtcccttccgggggcgacgacacga
caggaccaggtggagcagttcctggcccggcacaaggggccaggcctgcagcacgtgggg
ctgtatacgcctaacattgtggaggccactgagggggtggcaactgctggaggccagttc
ctggctccccctggggcatactaccagcagccaggaaaggagaggcagatccgagctgca
gggcacgagcctcatctgcttgctcgacaggggatcctgctagatggtgataaaggcaag
tttctgcttcaggtcttcaccaagtccctttttactgaggacactttcttcctggagctg
attcagaggcagggggccactggctttggtcagggcaacatcagagctctgtggcagtcc
gtacaggagcaatctgccaggagccaggaagcctaa

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_6|405_aa
MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDVWVSEVMLQQTQVATVINYYTG
WMQEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIAS
IAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL
GATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPP
SEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFP
SVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTP
VTTVPPGARWLTQEEFHTAAVSTAMKKALPLLSLLYFLVFPTCST

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_6|1218_bp
atgaggaagccacgagcagccgtgggaagtggtcacaggaagcaggcagccagccaggaa
gggaggcagaagcatgctaagaacaacagtcaggccaagccttctgcctgtgatgtgtgg
gtctcagaggtcatgctgcagcagacccaggttgccactgtgatcaactactataccgga
tggatgcaggaggtgaatcaactctgggctggcctgggctactattctcgtggccggcgg
ctgcaggagggagctcggaaggtggtagaggagctagggggccacatgccacgtacagca
gagaccctgcagcagctcctgcctggcgtggggcgctacacagctggggccattgcctct
atcgcctttggccaggcaaccggtgtggtggatggcaacgtagcacgggtgctgtgccgt
gtccgagccattggtgctgatcccagcagcacccttgtttcccagcagctctggggtcta
gcccagcagctggtggacccagcccggccaggagatttcaaccaagcagccatggagcta
ggggccacagtgtgtaccccacagcgcccactgtgcagccagtgccctgtggagagcctg
tgccgggcacgccagagagtggagcaggaacagctcttagcctcagggagcctgtcgggc
agtcctgacgtggaggagtgtgctcccaacactggacagtgccacctgtgcctgcctccc
tcggagccctgggaccagaccctgggagtggtcaacttccccagaaaggccagccgcaag
ccccccagggaggagagctctgccacctgtgttctggaacagcctggggcccttggggcc
caaattctgctggtgcagaggcccaactcaggtctgctggcaggactgtgggagttcccg
tccgtgacctgggagccctcagagcagcttcagcgcaaggccctgctgcaggaactacag
cgttgggctgggcccctcccagccacgcacctccggcaccttggggaggttgtccacacc
ttctctcacatcaagctgacatatcaagtatatgggctggccttggaagggcagacccca
gtgaccaccgtaccaccaggtgctcgctggctgacgcaggaggaatttcacaccgcagct
gtttccaccgccatgaaaaaggcactacctttgttgtctttgttgtacttccttgtgttt
cctacatgttctacatga

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_7|539_aa
MAADSDDGAVSAPAASDGGVSKSTTSGEELVVQVPVVDVQSNNFKEMWPSLLLAIKTANF
VAVDTVRVGKQGGQVVVKGLVLEACHNSPFTYPQELSGLGDRKSLLNQCIEERYKAVCHA
ARTRSILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEEYVIEPKSVQFLIQHGFNFNQQ
YAQGIPYHKGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESL
GTFTADLCEMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFC
NYPSSMRDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAA
AEDKRRRRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAADETRN
LPHSKQGNKNDLEMGIKAARPEIADRATSEVPGSQASPNPVPGDGLHRAGFDAFMTGYVM
AYVEVSQGPQPCSSGPWLPECHNKVYLSGKAVPLTVAKSQFSRSSKAHNQKMKLTWGSS

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_7|1620_bp
atggccgccgacagtgacgatggcgcagtttcagctcccgcagcttccgacggtggtgtc
agcaaaagcacaacatctggggaggagctagtagtccaggttcccgtagtggatgtgcaa
agcaacaacttcaaggagatgtggccatccctcctgctagccataaagacagctaatttc
gtggctgtggacacggtgagagttgggaaacaaggagggcaggtggttgtgaaggggctg
gtgctagaggcctgtcacaactctccctttacctacccacaggagctgagtgggcttggg
gacaggaagagtttgctgaaccagtgcattgaggaacgttacaaggccgtgtgtcatgct
gccaggacccgttctatcctttccctgggcctcgcctgcttcaagcggcagccagacaag
ggtgaacattcctatctggctcaagtgttcaatctcactctgctgtgcatggaggagtat
gtcatagaaccaaagtctgtgcagttcctgatacagcatggcttcaacttcaaccagcag
tatgcccaaggcatcccctaccataagggcaatgacaagggtgatgagagccagagccag
tcagtacggaccctattcctggagctaatccgagcccgccggcccctggtgctacacaat
ggccttatagacttggtgttcctgtaccagaacttctatgcacacctccctgagagtctg
ggaaccttcaccgctgacctgtgtgagatgttcccagcaggcatttatgacaccaaatat
gctgctgagtttcatgcccgtttcgtggcctcctacttagaatatgccttccggaaatgt
gaacgggaaaatgggaagcagcgggcagctggcagcccacaccttaccctggagttctgc
aactatccttccagcatgagggaccatattgattaccgctgctgcctgcccccagcaacc
caccgtcctcatcccaccagcatctgtgacaacttctcggcttatggctggtgccccctg
ggaccacagtgtcctcagtctcacgatattgaccttatcattgacactgatgaggctgcg
gcagaggacaagcggcgacggcgacgacgtagggaaaaacggaagagggctttattgaac
ctaccggggacacagacctctggggaagctaaggatggtcctcccaagaagcaggtctgt
ggggatagcatcaagcctgaagaaaccgagcaggaggtggctgccgatgaaactaggaac
ctgcctcactccaagcaaggcaacaaaaatgacttagagatggggattaaggcagcaagg
cctgaaatagctgatagagctacctcagaagtgccagggagccaagccagtcctaaccca
gtgcctggggatggattgcaccgggctggttttgatgcctttatgacaggttatgtgatg
gcctatgtggaagtgagccagggaccgcagccctgcagctctggaccctggctccctgaa
tgccacaataaggtatatttgagtggcaaagctgtacccctcacagtggccaagagccag
ttctctcgttcctccaaagcccacaatcagaagatgaagctcacttggggcagtagctga

>gi568815597f:45227149_45428261|GENSCAN_predicted_peptide_8|497_aa
VRHRASGQVMALKMNTLSSNRANMLKEVQLMNRLSHPNILRFMGVCVHQGQLHALTEYIN
SGNLEQLLDSNLHLPWTVRVKLAYDIAVGLSYLHFKGIFHRDLTSKNCLIKRDENGYSAV
VADFGLAEKIPDVSMGSEKLAVVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEIIARIQ
ADPDYLPRTENFGLDYDAFQHMVGDCPPDFLQLTFNCCNMDPKLRPSFVEIGKTLEEILS
RLQEEEQERDRKLQPTARGLLEKAPGVKRLSSLDDKIPHKSPCPRRTIWLSRSQSDIFSR
KPPRTVSVLDPYYRPRDGAARTPKVNPFSARQDLMGGKIKFFDLPSKSVISLVFDLDAPG
PGTMPLADWQEPLAPPIRRWRSLPGSPEFLHQEACPFVGREESLSDGPPPRLSSLKYRVK
EIPPFRASALPAAQAHEAMDCSILQEENGFGSRPQGTSPCPAGASEEMEVEERPAGSTPA
TFSTSGIGLQTQGKQDG

>gi568815597f:45227149_45428261|GENSCAN_predicted_CDS_8|1494_bp
gtacgacaccgagcttctggtcaggtgatggctcttaagatgaacacattgagcagtaac
cgggcaaacatgctgaaagaagtacagctcatgaatagactctcccatcccaacatcctt
aggttcatgggtgtatgtgttcatcaaggacaattgcatgcacttacagagtatatcaac
tccgggaacctggaacagttgctagacagtaacctgcatttgccttggactgtgagggta
aaactggcctatgacatagcagtgggcctcagctaccttcacttcaaaggcatttttcat
cgggacctcacatctaagaactgcctgataaagagggatgagaatggttactctgcagtg
gtagctgactttggcctggctgagaagatccccgatgtcagcatggggagtgagaagctg
gccgtggtgggttccccattctggatggcacctgaggttctccgagatgagccctataat
gaaaaggcagatgtgttctcttatggtatcatcctctgcgagatcatcgcccgcatccag
gccgatccggactatcttccccgcacagagaatttcgggctggactatgatgctttccag
cacatggtgggagactgtcccccagattttctgcaacttactttcaactgctgtaacatg
gatcccaaactgcgcccatcttttgtggagattgggaagaccctggaggaaattctgagc
cgcctacaggaagaagagcaggagagggataggaagctgcagcccacagccaggggactc
ttggagaaagcacctggggtgaagcgactaagctcactggatgacaagatcccccacaag
tcaccatgcccaagacgtaccatctggctgtctcgaagccagtcagatatcttttcccgt
aagcccccacgtacagtgagtgtcttggacccatactaccggccacgagatggtgctgcc
cgcacccccaaagtcaacccttttagtgctcgccaggacctcatggggggcaagatcaag
ttttttgacctgcccagcaagtctgtcatctctctggtatttgacctggatgcaccaggg
cccggaactatgcccctggctgactggcaggagcccctggccccacctattcgccggtgg
cgttccttgcctggttcgcctgagttcttgcatcaagaggcttgtccatttgtgggccgg
gaagaatcgctatctgatgggcccccaccacgcctaagtagtctcaagtacagagttaaa
gagatcccaccattccgggcatctgccctaccagctgctcaagcccatgaggctatggac
tgctccattctccaggaagaaaatggttttgggtccaggccccaggggaccagtccatgc
cctgcgggtgcttctgaggagatggaggtagaagaaaggccagcaggctcaactccagcc
accttctccacctcaggcataggcctgcaaacccagggaaagcaggatgggtga