GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:23:56

Sequence gi568815597r:33047180_33281432 : 234253 bp : 47.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3991   4234  244  0  1   72   53   134 0.097   6.24
 1.02 Intr +  11158  11228   71  2  2   64   35    62 0.071  -2.60
 1.03 Intr +  17247  17390  144  2  0   96   91    65 0.237   8.08
 1.04 Intr +  23469  23837  369  2  0 -118   78   351 0.004   8.80
 1.05 Intr +  34999  35175  177  0  0  116   89   190 0.924  22.02
 1.06 Intr +  36775  36948  174  0  0   84  105   100 0.912  11.44
 1.07 Intr +  44871  45043  173  2  2   66   82   203 0.426  16.24
 1.08 Intr +  47369  47534  166  2  1   82   76   169 0.728  15.06
 1.09 Intr +  49528  49690  163  0  1   92   73   210 0.995  19.45
 1.10 Intr +  50888  51000  113  0  2   95  105   200 0.986  22.50
 1.11 Term +  52356  52478  123  2  0   79   39    46 0.401  -2.82
 1.12 PlyA +  54383  54388    6                               1.05

 2.00 Prom +  58880  58919   40                              -6.16
 2.01 Init +  59472  59651  180  2  0   87   77   108 0.848   8.78
 2.02 Intr +  70723  70937  215  0  2   75   99   223 0.997  19.61
 2.03 Intr +  72865  72999  135  1  0  100   84   165 0.996  16.98
 2.04 Intr +  73238  73259   22  2  1   99   64     7 0.878  -3.05
 2.05 Term +  73764  73892  129  2  0  118   53   135 0.987  11.18
 2.06 PlyA +  74400  74405    6                               1.05

 3.03 PlyA -  76195  76190    6                               1.05
 3.02 Term -  82644  82575   70  2  1   95   36    84 0.619   1.31
 3.01 Init -  86424  86279  146  0  2   78  115    73 0.515   6.87
 3.00 Prom -  91926  91887   40                              -7.56

 4.07 PlyA -  93158  93153    6                              -0.45
 4.06 Term - 100548  99998  551  1  2  107   37  1069 0.998  98.16
 4.05 Intr - 111189 111074  116  2  2  106  110   152 0.999  19.29
 4.04 Intr - 112765 112509  257  1  2   93  115   678 0.891  67.24
 4.03 Intr - 118387 118292   96  1  0   93  105   191 0.753  21.51
 4.02 Intr - 134337 133846  492  0  0   49   85   897 0.360  78.70
 4.01 Init - 135003 134815  189  0  0   63   74   162 0.622   9.31
 4.00 Prom - 160256 160217   40                              -2.46

 5.02 PlyA - 161002 160997    6                               1.05
 5.01 Sngl - 162994 162116  879  1  0   45   42   284 0.613  15.51
 5.00 Prom - 169550 169511   40                              -4.46

 6.00 Prom + 188923 188962   40                              -4.46
 6.01 Init + 192385 192438   54  0  0   98   89    67 0.907   9.11
 6.02 Intr + 203581 203771  191  0  2 -103   71   359 0.477  13.48
 6.03 Intr + 209111 209475  365  2  2   82   69   261 0.732  18.43
 6.04 Intr + 214403 214529  127  0  1   62   47    57 0.033  -1.26
 6.05 Intr + 228921 228984   64  0  1  109  110    29 0.604   5.92
 6.06 Intr + 229169 229415  247  1  1  140   96   441 0.998  47.13
 6.07 Intr + 232945 233278  334  2  1  112   75   285 0.957  24.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:33047180_33281432|GENSCAN_predicted_peptide_1|638_aa
MKRSRCRDRPQPPPPDRREDGVQRAAELSQSLPPRRRAPPGRQRLEERTGPAGPEGKEQP
PALASQSAEIAASARPPPRLGRLLGFQKACRCWSLNPHILMALLRSLVPPDKKHPQVWRG
RPPLHLAPNVGLFSRVKVRSSVVIEDKSMRDSRRGLSQRRRRRKKKKRGSSSKKKKRRKK
RKKKKRKKRKRRKNRKKKKKRKNKRKKKRKKEEKKEEEEERRKKEEEDEEGRGRGRRKRK
RKKRKKRRSRKKKETAAAAAAGERLGKWWPGECPVECVAYFLRRRLQQRLHPARQLLLQG
MAGYLSESDFVMVEEGFSTRDLLKELTLGASQATTDEVAAFFVADLGAIVRKHFCFLKCL
PRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMELVQHIGIPASKIICANPCKQIAQ
IKYAAKHGIQLLSFDNEMELAKVVKSHPSANFHIGSGCPDPQAYAQSIADARLVFEMGTE
LGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVTSAF
TVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQKYS
SSCCMLALTHSTPFIGSSEEEMMVPAHCHAPHRDLCFG

>gi568815597r:33047180_33281432|GENSCAN_predicted_CDS_1|1917_bp
atgaagcggagccgctgccgtgaccgaccgcagccgccgccgcccgaccgccgggaggat
ggagttcagcgggcagcggagctgtctcagtctttgccgccgcgccggcgagcgccgccc
gggaggcagcggctggaggagcggacgggccccgcggggcccgagggcaaggagcagccg
cctgccttggcctcccaaagtgccgagattgcagcctctgcccggccgccaccccgtctg
ggaaggcttctgggattccagaaagcctgcaggtgttggagcctcaaccctcatatcctc
atggccctgctgaggtctcttgtcccacctgacaagaaacacccacaggtgtggaggggc
aggccaccccttcatctggcgcccaacgtggggcttttctctagggtgaaggtacgctcg
agcgtggtcattgaggacaagtcaatgagagattcccgaagaggcctatctcaaagaaga
agaaggagaaagaagaagaagagaggtagcagcagcaagaagaagaagaggaggaagaag
agaaagaagaagaagaggaagaagaggaagaggaggaagaataggaagaagaagaagaag
aggaagaacaagaggaagaagaagaggaagaaggaagaaaagaaagaagaggaagaagaa
agaagaaagaaggaggaggaagatgaagaaggaagaggaagaggaagaaggaagaggaag
aggaagaagaggaagaaaagaagaagcagaaagaagaaagaaacagcagcagcagcagca
gctggagaaaggctgggaaaatggtggccaggagagtgtccggtagagtgtgttgcatac
tttctaaggcggcggctgcagcagcggctccatccagcccgtcagctcctcctgcaaggc
atggctggctacctgagtgaatcggactttgtgatggtggaggagggcttcagtacccga
gacctgctgaaggaactcactctgggggcctcacaggccaccacggacgaggtagctgcc
ttcttcgtggctgacctgggtgccatagtgaggaagcacttttgctttctgaagtgcctg
ccacgagtccggcccttttatgctgtcaagtgcaacagcagcccaggtgtgctgaaggtt
ctggcccagctggggctgggctttagctgtgccaacaaggcagagatggagttggtccag
catattggaatccctgccagtaagatcatctgcgccaacccctgtaagcaaattgcacag
atcaaatatgctgccaagcatgggatccagctgctgagctttgacaatgagatggagctg
gcaaaggtggtaaagagccaccccagtgccaattttcacattggcagtggctgtcctgac
cctcaggcctatgctcagtccatcgcagacgcccggctcgtgtttgaaatgggcaccgag
ctgggtcacaagatgcacgttctggaccttggtggtggcttccctggcacagaaggggcc
aaagtgagatttgaagagattgcttccgtgatcaactcagccttggacctgtacttccca
gagggctgtggcgtggacatctttgctgagctggggcgctactacgtgacctcggccttc
actgtggcagtcagcatcattgccaagaaggaggttctgctagaccagcctggcagggag
gaggaaaatggttccacctccaagaccatcgtgtaccaccttgatgagggcgtgtatggg
atcttcaactcagtcctgtttgacaacatctgccctacccccatcctgcagaagtactcg
tcttcctgttgcatgctggctctcacccactccactcccttcattggctcctcagaagag
gagatgatggtcccagcccactgccacgccccccaccgggatctttgctttggctga

>gi568815597r:33047180_33281432|GENSCAN_predicted_peptide_2|226_aa
MKDKNHMIISVDGEQAFDKIQHPFMIKTFNKLGMEGMYLNMIRAIYDKLTANVILNKDPK
KPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQA
CHITYAMSRVAWEALRRQLMAAEQEDDVEGVCKPLSCGWEITDTLCVGPVFTPASIIARG
LVSQVGKAVRVKQTPGGRFCFFGQCLLEQGWPRSIAVSSADSPGIP

>gi568815597r:33047180_33281432|GENSCAN_predicted_CDS_2|681_bp
atgaaggataaaaatcatatgatcatctcagtagatggagaacaagcatttgacaaaatt
cagcatcctttcatgataaaaactttcaacaaattaggtatggaaggaatgtacctcaac
atgataagggccatatatgacaagctcacagctaatgttatactcaacaaggatcctaag
aaaccatccacggagcagcccctgtacagcagcagcctgtggggcccggcggttgatggc
tgtgattgcgtggctgagggcctgtggctgccgcaactacacgtaggggactggctggtc
tttgacaacatgggcgcctacactgtgggcatgggttcccccttttgggggacccaggcc
tgccacatcacctatgccatgtcccgggtggcctgggaagcgctgcgaaggcagctgatg
gctgcagaacaggaggatgacgtggagggtgtgtgcaagcctctgtcctgcggctgggag
atcacagacaccctgtgcgtgggccctgtcttcaccccagcgagcatcattgcaaggggc
ctggtcagccaggttggcaaggcagtcagagtaaagcagacacctggtggtcgcttttgc
ttctttgggcagtgcctgttagaacagggctggccacggagtattgctgtgtccagtgcc
gacagccctggcatcccctga

>gi568815597r:33047180_33281432|GENSCAN_predicted_peptide_3|71_aa
MGGLQAAVITIPALLSSSTLLVISCINGKRAAGGPRSPAPAHHPHEGPRNSDDLLILRNI
TLYCPKDHQNG

>gi568815597r:33047180_33281432|GENSCAN_predicted_CDS_3|216_bp
atgggtggcttgcaagctgcagtgatcaccatcccggccctgctctcctcatccactctg
ctggtcatcagctgtataaatggaaaacgtgccgccggtggtcccaggtcacctgcccca
gcccaccatccccatgaggggcccagaaattctgatgacttgctgatacttcggaacatc
accctttattgtccaaaagatcaccagaatgggtaa

>gi568815597r:33047180_33281432|GENSCAN_predicted_peptide_4|566_aa
MVGVGRGQPAGGPAPPPPAAGAELLGSRPRGRGGSRGHRQLGFGWFRVERLRWTEAVAAK
LAGPSVLPPTAPRSLSRPPAPRAPLSAAPGAMACSLKDELLCSICLSIYQDPVSLGCEHY
FCRRCITEHWVRQEAQGARDCPECRRTFAEPALAPSLKLANIVERYSSFPLDAILNARRA
ARPCQAHDKVKLFCLTDRALLCFFCDEPALHEQHQVTGIDDAFDELQRELKDQLQALQDS
EREHTEALQLLKRQLAETKSSTKSLRTTIGEAFERLHRLLRERQKAMLEELEADTARTLT
DIEQKVQRYSQQLRKVQEGAQILQERLAETDRHTFLAGVASLSERLKGKIHETNLTYEDF
PTSKYTGPLQYTIWKSLFQDIHPVPAALTLDPGTAHQRLILSDDCTIVAYGNLHPQPLQD
SPKRFDVEVSVLGSEAFSSGVHYWEVVVAEKTQWVIGLAHEAASRKGSIQIQPSRGFYCI
VMHDGNQYSACTEPWTRLNVRDKLDKVGVFLDYDQGLLIFYNADDMSWLYTFREKFPGKL
CSYFSPGQSHANGKNVQPLRINTVRI

>gi568815597r:33047180_33281432|GENSCAN_predicted_CDS_4|1701_bp
atggtgggggtggggcggggtcaaccggctggtggccccgcccctcccccgcccgctgcg
ggggcggagttgcttgggtcccgcccacgggggcggggaggcagccgcggccaccggcag
ctcggattcggctggttccgggttgagaggctgcgctggaccgaagcggtggctgctaag
ctcgcggggccctcggtgctgcctccgacagcgccgcgctctctcagccgcccccctgcc
cctcgggcccccctctctgctgcccctggcgccatggcgtgcagcctcaaggacgagctg
ctgtgctccatctgcctgagcatctaccaggacccggtgagcctgggctgcgagcattac
ttctgccgccgctgcatcacggagcactgggtgcggcaggaggcgcagggcgcccgcgac
tgccccgagtgccggcgcacgttcgccgagcccgcgctggcgcccagcctcaagctggcc
aacatcgtggagcgctacagctccttcccgctggacgccatcctcaacgcgcgccgcgcc
gcgcgaccctgccaggcgcacgacaaggtcaagctcttctgcctcacggaccgcgcgctt
ctctgcttcttctgcgacgagcctgcactgcacgagcagcatcaggtcaccggcatcgac
gacgccttcgacgagctgcagagggagctgaaggaccaacttcaggcccttcaagacagc
gagcgggaacacaccgaagcgctgcagctgctcaagcgacaactggcggagaccaagtct
tccaccaagagcctgcggaccactatcggcgaggccttcgagcggctgcaccggctgctg
cgtgaacgccagaaggccatgctagaggagctggaggcggacacggcccgcacgctgacc
gacatcgagcagaaagtccagcgctacagccagcagctgcgcaaggtccaggagggagcc
cagatcctgcaggagcggctggctgaaaccgaccggcacaccttcctggctggggtggcc
tcactgtccgagcggctcaagggaaaaatccatgagaccaacctcacatatgaagacttc
ccgacctccaagtacacaggccccctgcagtacaccatctggaagtccctgttccaggac
atccacccagtgccagccgccctaaccctggacccgggcacagcccaccagcgcctgatc
ctgtcggacgactgcaccattgtggcttacggcaacttgcacccacagccactgcaggac
tcgccaaagcgcttcgatgtggaggtgtcggtgctgggttctgaagccttcagtagtggc
gtccactactgggaggtggtggtggcggagaagacccagtgggtgatcgggctggcacac
gaagccgcaagccgcaagggcagcatccagatccagcccagccgcggcttctactgcatc
gtgatgcacgatggcaaccagtacagcgcctgcacggagccctggacgcggcttaacgtc
cgggacaagcttgacaaggtgggtgtcttcctggactatgaccaaggcttgctcatcttc
tacaatgctgatgacatgtcctggctctacaccttccgcgagaagttccctggcaagctc
tgctcttacttcagccctggccagagccacgccaatggcaagaacgttcagccgctgcgg
atcaacaccgtccgcatctag

>gi568815597r:33047180_33281432|GENSCAN_predicted_peptide_5|292_aa
MKAEIKMFFETNKNKDTTYQNLWGTFKAVCRGNFIALNTHKRKQERSKIDTLTSQLKQLE
KEEQTNSKASRRQQITKIRAELKEIETKQTLQKKINESRSWFFEKINKIHRPLARLIKKK
REKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLSRLNQE
EVESPNRPITGSEIEAIINSLPTKKSPGPDGVTAEFYQRYKEELVSFLLKLFQSIEKERI
LPNSFYEASIILIPKPGRDTTTKKENFRPISLMNINAKILNKILANRIQQHI

>gi568815597r:33047180_33281432|GENSCAN_predicted_CDS_5|879_bp
atgaaggcagaaataaagatgttctttgaaaccaataagaacaaagacacaacataccag
aatctctggggcacatttaaagcagtgtgtagagggaactttatagcactaaatacccac
aagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaacaactagag
aaggaagagcaaacaaattcaaaagctagcagaaggcaacaaataactaagatcagagca
gaactgaaggaaatagagacaaaacaaacccttcaaaaaaaaatcaatgaatccaggagc
tggttttttgaaaagatcaacaaaattcatagaccactagcaagactaataaagaagaaa
agagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccaccgatccc
acagaaatacaaactaccatcagggaatattataaacacctctatgcaaataaactagaa
aacctagaagaaatggataaattcctggacacatacaccctctcaagactaaaccaggaa
gaagttgaatctccaaatagaccaataacaggctctgaaattgaggcaataattaatagc
ttaccaaccaaaaaaagtccaggaccagacggagtcacagccgaattctaccagaggtac
aaagaagagctggtatcattccttctgaaattattccaatcaatagaaaaagagagaatc
ctccctaactcattttatgaggccagcatcatcctgataccaaagcctggcagagacaca
acaacaaaaaaagagaattttaggccaatatccctgatgaacatcaatgcaaaaatcctt
aataaaatactggcaaaccgaatccagcagcacatctaa

>gi568815597r:33047180_33281432|GENSCAN_predicted_peptide_6|461_aa
MAEGKGEAGACFTGAQDRKKEEGRRKKEKEEEKEKKKKRRRKEEERRKKEEEEEEEEEEE
EEEGEEEGAWLMLESVFSSDRSRQRPALPTRGSPRGRTGCAAGEAGARRGPPGAGRLARG
LAERTGGRAALQTQPPAAAAAAASALAEPRSEQQATRKVCARLRSEPEPEPEPGACAGAP
ARPCSGRRARGCGRVPEAPPAQPAWCSALIQGNWSGLVYSGKGDTVISPIKSVSDDIYVC
NSWRIMMAEPRFNNPYFWPPPPTMPSQLDNLVLINKIKEQLMAEKIRPPHLPPTSASSQQ
PLLVPPAPAESSQAVMSLPKLQQVPGLHPQAVPQPDVALHARPATSTVTGLGLSTRTPSV
STSESSAGAGTGTGTSTPSTPTTTSQSRLIASSPTLISGITSPPLLDSIKTIQGHGLLGP
PKSERGRKKIKAENPGGPPVLVVPYPILASGETAKEGKTYS

>gi568815597r:33047180_33281432|GENSCAN_predicted_CDS_6|1383_bp
atggcggaaggcaaaggagaagcaggcgcctgcttcacgggggcgcaggacagaaagaaa
gaagaaggaagaagaaagaaggagaaggaggaggagaaggagaagaagaagaagagaaga
agaaaagaagaagaaagaagaaagaaggaagaagaagaagaagaagaagaagaagaagaa
gaagaagaaggagaagaagaaggtgcatggttgatgcttgagagcgtttttagttctgat
cggagtcgccagcgcccggcgctgcccactcgcgggagcccccggggccggacgggctgc
gcagccggagaggcgggggcccgacgcggcccccccggagccgggcgcctggcgcggggg
ctcgccgagcgcactgggggccgcgcggcgctgcagacccagcctcccgccgccgccgcc
gccgccgcctcggcgcttgcagaacccagaagtgaacagcaggcgacccggaaggtttgc
gcgcggctccgcagcgagccagagccggagcccgagcccggagcctgtgccggagcccca
gcccggccctgctcgggccgccgggcgcggggctgcggccgcgtcccggaggcgccgcca
gcacagccagcctggtgctcggcactcatccagggtaattggtcaggcttggtgtactca
ggaaaaggagacaccgttatctctccaataaagtctgtatctgatgacatttatgtatgc
aattcttggagaatcatgatggccgagcctcgatttaacaacccctacttctggccccct
cctcccaccatgcccagccagctggacaacctggttctgattaacaagatcaaggagcag
ctgatggccgagaagatcaggccgcctcacctgccgcccacgtcggcctcgtcgcagcag
ccgttgctagtgccgccggcacccgccgagagcagccaggccgtcatgtcgctgcccaag
ctgcagcaggtgccggggctgcatccacaggcggtgccgcagcccgacgtggcgctgcac
gcacggccggccaccagcaccgtcacaggtctggggctgtccacccggaccccgtctgtg
agcacttctgagtcaagcgcgggcgcgggcacgggcacgggtaccagcaccccgtccaca
cccaccaccaccagccagagccgcctcatcgcctcgtcccccaccctcatctcagggatc
accagcccccctctcctggactccatcaagacaatccagggccacggcctgcttggcccc
cccaagtccgaacgcggccgcaaaaagatcaaggcggagaacccggggggtccgcctgtc
cttgtagtcccctatcccatcctggcctcgggcgagactgccaaggagggcaagacgtac
agn