GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:31:10

Sequence gi568815587f:68584924_68790984 : 206061 bp : 47.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3004   3101   98  0  2   32   89   163 0.504   9.61
 1.02 Intr +   5737   5791   55  1  1   93   84    55 0.990   4.58
 1.03 Intr +   6653   6783  131  1  2   73   67   102 0.996   6.09
 1.04 Intr +  11174  11295  122  2  2   84  111   146 0.877  16.64
 1.05 Intr +  15418  15571  154  2  1   74   83    54 0.847   2.63
 1.06 Intr +  16940  17046  107  2  2   66  100    63 0.772   5.16
 1.07 Intr +  18419  18569  151  0  1   99   86   191 0.598  19.22
 1.08 Term +  24330  24447  118  0  1   96   54    21 0.055  -2.49
 1.09 PlyA +  25876  25881    6                               1.05

 2.00 Prom +  34254  34293   40                              -5.36
 2.01 Init +  38367  38424   58  2  1   42  107    36 0.821   2.37
 2.02 Intr +  39963  40096  134  1  2  115   80   106 0.951  12.86
 2.03 Term +  51052  51258  207  0  0   58   48   132 0.598   3.54
 2.04 PlyA +  53669  53674    6                               1.05

 3.00 Prom +  54383  54422   40                              -5.56
 3.01 Init +  55243  55296   54  0  0   63   63    52 0.310   1.48
 3.02 Intr +  56289  56411  123  2  0   96   60    18 0.097   0.58
 3.03 Term +  64985  65512  528  1  0   87   44   295 0.080  19.25
 3.04 PlyA +  65917  65922    6                               1.05

 4.00 Prom +  75625  75664   40                              -4.76
 4.01 Init +  83083  83278  196  0  1   90   77   154 0.978  13.66
 4.02 Intr +  89247  89362  116  1  2   56   46    95 0.311   2.27
 4.03 Intr +  91033  91061   29  0  2  133   92     1 0.381   1.91
 4.04 Term +  92770  92875  106  1  1   69   55    74 0.395   0.08
 4.05 PlyA +  93273  93278    6                               1.05

 5.00 Prom +  93556  93595   40                              -1.16
 5.01 Init + 100001 100081   81  1  0   56  131   195 0.880  19.57
 5.02 Intr + 100671 100725   55  2  1  114  113    84 0.998  12.05
 5.03 Intr + 103091 103177   87  0  0   45   94   149 0.427  11.14
 5.04 Intr + 103926 104003   78  1  0   99   95    40 0.975   5.32
 5.05 Intr + 107386 107467   82  2  1  126   56    26 0.155   1.90
 5.06 Intr + 108740 108773   34  2  1  106  100    17 0.052   2.93
 5.07 Term + 124439 124582  144  1  0  126   43   119 0.868   9.11
 5.08 PlyA + 124710 124715    6                               1.05

 6.19 PlyA - 125383 125378    6                              -0.45
 6.18 Term - 128027 127966   62  0  2   90   43    46 0.408  -1.73
 6.17 Intr - 128484 128307  178  0  1   74   99    50 0.503   4.19
 6.16 Intr - 131016 130914  103  2  1  157   85    92 0.997  15.98
 6.15 Intr - 143126 142875  252  1  0   91   42   117 0.005   3.95
 6.14 Intr - 151092 151055   38  0  2   86   81     1 0.007  -3.74
 6.13 Intr - 152593 152558   36  1  0   39  111    63 0.019   2.16
 6.12 Intr - 162443 162285  159  2  0   86   46   102 0.511   5.98
 6.11 Intr - 165776 165267  510  2  0  102   63   815 0.984  73.57
 6.10 Intr - 166610 166497  114  2  0  126   96    57 0.999  10.94
 6.09 Intr - 174738 174646   93  0  0   89   92   125 0.999  13.16
 6.08 Intr - 175415 175302  114  2  0   42  117   111 0.996  10.04
 6.07 Intr - 176764 176612  153  1  0   81  100    51 0.980   5.87
 6.06 Intr - 177838 177704  135  1  0  109   47   161 0.652  14.86
 6.05 Intr - 188506 188342  165  1  0   93  116   172 0.999  20.66
 6.04 Intr - 190509 190393  117  0  0   67  100   152 0.985  14.96
 6.03 Intr - 195822 195717  106  2  1   73  105   156 0.999  16.02
 6.02 Intr - 197036 196848  189  1  0   89   86   159 0.947  14.50
 6.01 Init - 200073 199892  182  0  2   31   85   299 0.713  22.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:68584924_68790984|GENSCAN_predicted_peptide_1|311_aa
AFSDYQMQQMTSNFIDQFGFNDEKFADQDDIGNVSFDRVSDINFTLNTNESGNIALFEAC
CKERIQQFDDGGSDEEDIWEEKHIAFTPESQRRSSSGSTDSEESTDSEEEDGAKQDLFEP
SSANTEDKMEVDLSEPPNWSANFDVPMETTHGAPLDSVGSDVWSTEEPMPTKETGWASFS
EFTSSLSTKDSLRSNSPVEMETSTEPMDPLTPSAAALAVQPEAAGSVAMEASSDGEEDAE
STDKVTETVMNGGMKETLSLTVDAKTETAVFKRISSWPPLLPLAFVLLTHCSRATRGAVK
SDAVNTVTSCD

>gi568815587f:68584924_68790984|GENSCAN_predicted_CDS_1|936_bp
gccttttctgattatcagatgcaacaaatgacgtccaattttattgaccagtttggcttc
aacgatgagaagtttgcagatcaagatgacattggcaatgtttcttttgatcgagtatca
gacatcaactttactctcaatacaaatgaaagtggaaatattgccttgtttgaagcatgt
tgtaaggaaagaatacaacagtttgatgatggtggctctgatgaggaagatatatgggag
gaaaagcacatcgcattcacaccagaatcccaaagacgatccagctcggggagtacagac
agtgaggaaagtacagactctgaagaagaagatggagcaaagcaagacttgtttgaaccc
agcagtgccaacacggaggataaaatggaggtggacctgagtgaaccacccaactggtca
gctaactttgatgtcccaatggaaacaacccacggtgctccattggattctgtgggatct
gatgtctggagcacagaggagccgatgccaactaaagagacgggctgggcttctttttca
gagttcacgtcttccctgagcacaaaagattctttaaggagtaattctccagtggaaatg
gaaaccagcactgaacccatggaccctctgactcccagtgcggctgccctggcagtgcag
ccagaagcggcaggcagtgtggccatggaagccagctctgacggagaggaggatgcagaa
agtacagacaaggtaactgagacagtgatgaatggcggcatgaaggaaacgctcagcctc
actgtagatgccaagacagagactgcggtcttcaaaaggatcagctcttggccccctctt
ctccctctggcgtttgtgcttctcacacattgttcgagggcaactcgaggagccgtgaaa
tccgatgcagtcaacacggtgacctcatgtgactga

>gi568815587f:68584924_68790984|GENSCAN_predicted_peptide_2|132_aa
MTSGPQTNQPKKHLTNFKSDERERDFLKSNLTLITAGFTSQASRKALEQFPERIPNGTTR
QIPQELATSARNLATRPRNAYSPEFLLSCIPSVRDPTGNRTVQLTWQPLPELLEVWPKAD
CFPDLLGLAAED

>gi568815587f:68584924_68790984|GENSCAN_predicted_CDS_2|399_bp
atgacctcaggtcctcagaccaaccagcccaagaaacatctcaccaatttcaaatctgat
gaacgggaaagagattttctcaagtccaatctcacgctgataaccgctggcttcacgagc
caggcctccaggaaggcattagagcagtttcctgagaggatccccaatggaactaccagg
caaattccccaggagcttgctacaagtgccagaaatctggccaccaggccaaggaatgcc
tacagcccagaattcctcctaagctgcatcccatctgtgcgggaccccactggaaatcgg
actgttcaactcacctggcagccactcccagagctcctggaagtctggcccaaggctgac
tgcttcccagatcttcttggcttagcggctgaagactga

>gi568815587f:68584924_68790984|GENSCAN_predicted_peptide_3|234_aa
MDSRDPENSGSGTLNDGLSWLCKVSGSGSKGGVCLPEDRTTSCSFHQGTAGSFWPSQQAR
GQFHSHRTLQASCPRLCPGRCFLPGPWSAPRTPPQIPATAALFGVSDGELSFLCPRSLQG
SAPATVAPLSRLLCWMLGFSPGPSGALEPSSAPRPGPVMGHFRALDGGPAPWRRISHPWQ
TPAIRILPFLPAPLFLRVAQKQGWSFRWLLLHTRPWGHRGPGDIMVPASMELTL

>gi568815587f:68584924_68790984|GENSCAN_predicted_CDS_3|705_bp
atggactcaagagacccggagaacagcggaagtgggactcttaatgatggtctttcttgg
ctctgcaaggttagcggttctggttccaaaggaggtgtttgcttgccagaggacagaact
acaagctgtagcttccaccagggtactgcaggctccttttggcccagccagcaagcccga
ggacagtttcactcccaccggaccctccaagcctcttgcccacggctgtgtcctggccgc
tgcttcctgcctgggccctggagtgctccgaggacccctccccaaatcccagccaccgcc
gccctgtttggcgtctctgatggagagctgagcttcctgtgtcctcggagcctgcaggga
tcagcacccgccacggtagctcccctttcccgcctgctctgctggatgctgggtttcagt
ccaggtccttcgggcgccctggaaccctcttccgctccccgacctgggcctgtcatgggc
cactttagggccctggatggcggccctgctccctggcgccgcatcagccatccgtggcag
actcccgccatccggattctccctttcctgccggcacctctcttcttgcgagtggcccag
aagcaggggtggtcgttccgctggctcctgctgcacaccaggccctggggacatcgtggc
cctggggacatcatggtccctgcctccatggagctgacgctctag

>gi568815587f:68584924_68790984|GENSCAN_predicted_peptide_4|148_aa
MIPKLPRRRNTCLGITLNGTTCYPPSPPCTPHPPAVPSRPLGHRGLGFRKKTADESPVMD
PIVPHVFSLPGDAAPLGGQLLGTGLPFGQLARQLCSRKWRALAMRGIGELGWVGLSYPEN
PQLDESPRAQVDSRTPGCDPASDQQGGP

>gi568815587f:68584924_68790984|GENSCAN_predicted_CDS_4|447_bp
atgatccccaaactacctcgccggcgcaacacgtgcctgggcatcacgctgaacggcacg
acctgctaccctccttccccgccctgcaccccccaccccccagccgtgccatcaaggcct
ctgggccaccgaggacttggattcagaaagaaaacagcagatgaaagtcctgtaatggac
cccattgtgccccatgtgttcagtctccctggtgatgcagccccactcggtggccagctg
ctgggcacggggctgccgttcggacagcttgcaagacagctgtgctcccggaaatggagg
gccctggcgatgaggggcattggggagttgggttgggttgggctgagctacccagaaaac
ccccagctggatgagtcacccagggcacaggtggattcacggactcccggctgtgaccct
gcctctgaccagcaaggaggtccctga

>gi568815587f:68584924_68790984|GENSCAN_predicted_peptide_5|186_aa
MARGSALLLASLLLAAALSASAGLWSPAKEKRGWTLNSAGYLLGPHAVGNHRSFSDKNGL
TSKRELRPEDDMKPGSFDRSIPENNIMRTIIEFLSFLHLKGSTLTLGGLGSPALQTTPSP
EVVTSSTWYKRSVAGGSQKAHVQPEKAKVLRTRLSNLGVLLSGQPSPSMPLGAVKEVLED
KLNRIT

>gi568815587f:68584924_68790984|GENSCAN_predicted_CDS_5|561_bp
atggcccgaggcagcgccctcctgctcgcctccctcctcctcgccgcggccctttctgcc
tctgcggggctctggtcgccggccaaggaaaaacgaggctggaccctgaacagcgcgggc
tacctgctgggcccacatgccgttggcaaccacaggtcattcagcgacaagaatggcctc
accagcaagcgggagctgcggcccgaagatgacatgaaaccaggaagctttgacaggtcc
atacctgaaaacaatatcatgcgcacaatcattgagtttctgtctttcttgcatctcaaa
ggctccacgctcacgcttggtggccttgggtcgccggcgcttcagaccactcccagcccg
gaggtagtgacgtcatccacctggtataaacggagtgtggcaggtggcagccagaaggcc
cacgtgcagccagagaaggccaaggttctgaggactcgcctgtcaaaccttggggtcctg
ctgtcaggacagccttccccatcaatgccgcttggagctgtgaaagaggttctggaagac
aagttgaaccgcatcacatag

>gi568815587f:68584924_68790984|GENSCAN_predicted_peptide_6|901_aa
MRDSKHIVVYHRGRYFKVWLYHDGRLLKPREMEQQMQRILDNTSEPQPGEARLAALTAGD
RVPWARCRQAYFGRGKNKQSLDAVEKAAFFVTLDETEEGYRSEDPDTSMDSYAKSLLHGR
CYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGD
INPNIPYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPD
AFVQLALQLAHYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMVDPAQTVE
QRLKLFKLASEKHQHMYRLAMTGSGIDRHLFCLYVVSKYLAVESPFLKEVLSEPWRLSTS
QTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPETVP
VPHPSPFSNRQRPPAPEARPTPHPARSTLRQPRRPQVRGPRHPAPPPCAMEEGPLPGGLP
SPEDAMVTELLSPEGPFASENIGLKAPVKYEEDEFHVFKEAYLGPADPKEPVLHAFNPAL
GADCKGQVKAKLAGGDSDGGELLGEYPGIPELSALEDVALLQAPQPPACNVHFLSSLLPA
HRSPAVLPLGAWVLEGASHPGVRMIPVEIKEAGGTTTSNNPEEATLQNLLAQESCCKFPS
SQELEDASCCSLKKDSNPMSSAIGHGFVMALMGTERAVHLEPWKEYGGLRTGRETGNRQL
VEKSEHTQHSSVKFMFLHGHGSWYSKTIALKFVLLYGCGLWYSKTITLSDIKERGLQITI
TDITVMKRYCDCFASGDFCNNCNCNNCCNNLHHDIERFKAIKACLGRNPEAFQPKIGKGQ
LGNVKPQHNKGCNCRRSGCLKNYCECYEVSAQLPNSLTKNTGWKLPEGSRASSSLSKAQV
L

>gi568815587f:68584924_68790984|GENSCAN_predicted_CDS_6|2706_bp
atgagagacagcaagcacatcgtcgtgtaccatcgaggacgctacttcaaggtctggctc
taccatgatgggcggctgctgaagccccgggagatggagcagcagatgcagaggatcctg
gacaatacctcggagcctcagcccggggaggccaggctggcagccctcaccgcaggagac
agagttccctgggccaggtgtcgtcaggcctattttggacgtgggaaaaataagcagtct
cttgatgctgtggagaaagcagcgttctttgtgacgttagatgaaactgaagaaggatac
agaagtgaagacccggatacgtcaatggacagctacgccaaatctctactacacggccga
tgttacgacaggtggtttgacaagtcgttcacgtttgttgtcttcaaaaacgggaagatg
ggcctcaacgctgaacactcctgggcagatgcgccgatcgtggcccacctttgggagtac
gtcatgtccattgacagcctccagctgggctatgcggaggatgggcactgcaaaggcgac
atcaatccgaacattccgtaccccaccaggctgcagtgggacatcccgggggaatgtcaa
gaggttatagagacctccctgaacaccgcaaatcttctggcaaacgacgtggatttccat
tccttcccattcgtagcctttggtaaaggaatcatcaagaaatgtcgcacgagcccagac
gcctttgtgcagctggccctccagctggcgcactacaaggacatgggcaagttttgcctc
acatacgaggcctccatgacccggctcttccgagaggggaggacggagaccgtgcgctcc
tgcaccactgagtcatgcgacttcgtgcgggccatggtggacccggcccagacggtggaa
cagaggctgaagttgttcaagttggcgtctgagaagcatcagcatatgtatcgcctcgcc
atgaccggctctgggatcgatcgtcacctcttctgcctttacgtggtgtctaaatatctc
gctgtggagtcccctttccttaaggaagttttatctgagccttggagattatcaacaagc
cagacccctcagcagcaagtggagctgtttgacttggagaataacccagagtacgtgtcc
agcggagggggctttggaccggttgctgatgacggctatggtgtgtcgtacatccttgtg
ggagagaacctcatcaatttccacatttcttccaagttctcttgccctgagacggttcct
gtccctcacccttcccccttctccaaccgccaacggccgcctgcgcctgaggcccggccc
acgccccatcccgctcgctccacgctgcggcagccccggcggccccaggtgcgcggcccc
cgccatcccgccccgccgccctgcgccatggaggagggccctctgccgggcgggctgccc
agccccgaggatgcgatggtgacggagctcttaagccccgagggtccgttcgcttcggag
aacatcggcctgaaggcccccgtgaagtacgaggaggacgagttccacgtcttcaaagaa
gcgtacctgggcccggcggaccccaaggaacccgtcctgcacgcgttcaaccccgcgctg
ggcgccgactgcaagggccaggtcaaggcgaagctcgcggggggcgacagcgacggcggg
gagctcctcggggagtaccccgggatcccagagctcagcgcgctggaggacgtcgcgctc
ctgcaggccccgcagccgcccgcctgcaacgtgcacttcctgtcctcgctgctacccgcg
caccgcagcccggcggtgttgcccctgggcgcctgggtcctggaaggagcctcccacccg
ggcgtccgcatgatcccagttgaaatcaaggaagcaggtggtactactacaagtaataat
ccggaagaagcaactttgcagaatcttcttgctcaggaatcctgttgcaagttcccatcg
tcccaggaactagaggatgcctcctgctgttctcttaagaaagattccaacccaatgagt
tctgccatcgggcatggcttcgtgatggccttgatgggcactgagagagcagtccatctg
gagccatggaaggaatatggaggcctgaggacagggagagagacagggaaccgccagttg
gtggagaagtcagaacacactcagcattcatcagttaagttcatgttcttacatggacat
ggctcgtggtactccaaaacaattgcacttaagttcgtgctcttatatggatgtggcttg
tggtactccaaaacaattacacttagtgacatcaaagaacgaggattgcagatcactata
acagacataacagtaatgaaaaggtactgtgactgctttgccagtggggacttttgcaac
aactgcaattgtaataattgttgcaacaacttgcatcatgatattgaacggtttaaagcc
attaaggcatgtcttggtagaaatccagaagctttccagccaaaaattgggaagggccaa
ttgggcaatgtcaagccccagcacaacaaagggtgcaactgcaggaggtcaggctgcctg
aagaattactgcgagtgctatgaggttagtgcccagctccctaactcactaacaaaaaac
acagggtggaagctcccggagggcagccgcgcctcttcctccctgagcaaagcccaggtg
ctctag