GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:55:21

Sequence gi568815591r:40033062_40234567 : 201506 bp : 40.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  14760  14816   57  0  0   58  121   100 0.433   7.38
 1.02 Intr +  29765  29866  102  2  0   87   86   116 0.500   9.67
 1.03 Intr +  45659  45790  132  2  0   35   89   186 0.760  12.24
 1.04 Intr +  55065  55270  206  0  2   84   65   163 0.653  11.52
 1.05 Intr +  59724  60176  453  1  0   54  114   388 0.605  30.30
 1.06 Term +  61069  61919  851  2  2   89   48   687 0.990  56.82
 1.07 PlyA +  62448  62453    6                               1.05

 2.06 PlyA -  63171  63166    6                               1.05
 2.05 Term -  78745  78733   13  0  1   79   42    31 0.002  -5.70
 2.04 Intr - 101379 101168  212  0  2   24   90   271 0.673  17.69
 2.03 Intr - 101623 101550   74  2  2   52   60   101 0.914   1.91
 2.02 Intr - 102125 101913  213  0  0   97    9   151 0.707   5.86
 2.01 Init - 119892 119877   16  0  1  100   77   -18 0.014  -1.14
 2.00 Prom - 126628 126589   40                              -3.25

 3.05 PlyA - 128849 128844    6                               1.05
 3.04 Term - 135418 135254  165  1  0   75   46   212 0.996  12.63
 3.03 Intr - 137920 137777  144  1  0   13   63   147 0.790   4.26
 3.02 Intr - 139856 139785   72  2  0   98   64    62 0.889   3.48
 3.01 Init - 141264 141211   54  0  0   95   78    41 0.562   3.15
 3.00 Prom - 142479 142440   40                              -4.75

 4.04 PlyA - 144677 144672    6                               1.05
 4.03 Term - 146792 146616  177  2  0   79   48   125 0.174   4.30
 4.02 Intr - 184594 184480  115  0  1   88   64   109 0.197   8.03
 4.01 Init - 186199 186036  164  1  2   69   94    77 0.803   5.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  45011  45060   50  1  2   74   41   105 0.924   4.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:40033062_40234567|GENSCAN_predicted_peptide_1|600_aa
XGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGIPAAAL
DLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMG
MTDDVSTIKAPRKDLSLGLDDSRTNTPQGVLPSSQLKSQGSSNVAPVKTGPGQHLNHSEL
AILLNLLQSKTSVNMADFVQVLNIKVNSETQQQLNKINLPAGILATGEKQTDPSTPQQES
SKPLGGIQPSSQTIQPKVETDAAQAAVQSAFAVLLTQLIKAQQSKQKDVLLEERENGSGH
EASLQLRPPPEPSTPVSGQDDLIQHQDMRILELTPEPDRPRILPPDQRPPEPPEPPPVTE
EDLDYRTENQHVPTTSSSLTDPHAGVKAALLQLLAQHQPQDDPKREGGIDYQAGDTYVST
SDYKDNFGSSSFSSAPYVSNDGLGSSSAPPLERRSFIGNSDIQSLDNYSTASSHSGGPPQ
PSAFSESFPSSVAGYGDIYLNAGPMLFSGDKDHRFEYSHGPIAVLANSSDPSTGPESTHP
LPAKMHNYNYGGNLQENPSGPSLMHGQTWTSPAQGPGYSQGYRGHISTSTGRGRGRGLPY

>gi568815591r:40033062_40234567|GENSCAN_predicted_CDS_1|1803_bp
nnagggcagataaaacttgcagactttggacttgctcgattgtatagctcagaagaaagt
cggccgtatactaacaaggtaattactttatggtaccgtccacctgaactgctactggga
gaagaacgatacacaccagccattgatgtatggagctgtggtattcctgcagctgcgcta
gacttatttgattacatgcttgccttggatcctagtaagcgctgcactgctgaacaggct
cttcagtgcgagttcctccgagatgtggaaccctcaaaaatgcctccaccagatctccct
ttatggcaagattgtcatgagttatggagtaaaaagcgaagaagacagaagcagatgggc
atgactgatgatgtttccacaattaaagcccccaggaaggacttgtctctgggcttggat
gacagcagaaccaacacaccccagggtgtgctgccatcttcacagctgaaatctcagggc
agctcaaatgtggcacctgtaaaaacaggccctggacagcacttaaaccacagtgaattg
gcaattctactaaacctactacaatctaaaacaagtgttaatatggctgattttgtccaa
gtgttgaacattaaggtaaactctgagactcaacagcagctaaataaaataaaccttcct
gctggaattttggcaacaggtgaaaaacagacagatccatcaacaccacaacaggagtct
tcgaaaccgttgggaggaattcagccttcttctcagaccatccagcctaaagtggagact
gatgctgcccaggcggctgtgcagagtgcatttgcagttctgttgactcagttaataaag
gctcagcagtcaaagcagaaagatgtgctactagaagagagggaaaatggatcgggacat
gaagcgtcattacaactcaggccacctccagaacctagcactccggtgtcgggacaagat
gacctcatccagcatcaagatatgaggatcttggagctaacgccagaaccagaccggcct
cgaattctgcctcctgaccaacgacctcccgagcctcctgaaccaccaccagtcactgag
gaagatctagattatcggacagaaaaccagcatgtacccaccaccagttcttcattaact
gaccctcatgccggagtgaaggcagccctgttacagctgcttgctcagcatcagccccag
gatgaccccaaaagagaaggtgggattgattatcaagcaggagacacttacgtgtccact
tcagactacaaggacaactttggatcctcttctttctcttctgctccttatgttagcaat
gatggtctaggaagcagttctgctccaccactagaacgacgtagtttcattggaaattca
gatattcagtctttggataactacagtactgcttcatctcattctggtggtccacctcag
ccttctgccttttctgagtcatttcccagttcagtagctggatatggagacatttacctc
aatgctggtcccatgttgtttagtggagacaaggaccatagatttgaatatagccatggt
cctattgcagtcctggcaaacagcagtgacccttccacggggccagagagtactcatcct
ttgccagcaaagatgcacaactataactatggtggtaacttacaggaaaatccgagtggc
cccagcctcatgcatggacagacctggacttctcctgcccaaggacctggatattcacaa
ggatacaggggacatattagcacatcaactggcagaggcagaggcagagggttaccatac
tga

>gi568815591r:40033062_40234567|GENSCAN_predicted_peptide_2|175_aa
MGRSQGRPRRQAGAGIPLATQTESRRVPDCGRPVHSPLPPPRPEKRQVLRRAATLASVAS
IACVSDGIGPGASGELRWLRSEDCFGKGLAVLCGGPVDTVPTGTGVRTTRRRTGPGLGRT
GAVTLRDTAAASRGAGSGLRPLAATLAPTPGPPRGPSSNSATPQGSSRPTPSALR

>gi568815591r:40033062_40234567|GENSCAN_predicted_CDS_2|528_bp
atgggcagatcacaagggcgcccgaggaggcaagctggggcagggatccctttagccacc
cagaccgaatctcggagggtacctgactgcgggcggccagtccacagccccctcccgccg
ccccggccggagaagaggcaggttctgcgcagagctgccaccctcgccagcgtcgccagc
atcgcgtgcgtctcagatggcatcggtcccggtgcaagcggcgaactccggtggctgcgg
tcggaggactgttttggtaaaggactagcagttctctgcggagggccggttgatacagtt
ccgacgggtacgggagtccgcaccacacgccgccgtacgggccccggtctaggccgtacg
ggagcagtcactctccgcgacacggcggcagcttcccggggggccggttcgggtctccgt
cccctggcggctaccctggctcctactccaggtcccccgcggggtcccagcagcaattcg
gctactccccagggcagcagcagacccacccccagtgcccttcgataa

>gi568815591r:40033062_40234567|GENSCAN_predicted_peptide_3|144_aa
MGQVCWLTPVIRALWEAENQRKYQAPVGQLKTISMAAGLNTQEPSPTLELTPERKGNVGY
AGKGPLESSSPNPFLCGQERQEKRCRTATSNRSCEAVKLQIVLQIEPQMQFMTKIYHGPL
DQPASTCYDVDDTEGTPPEEISTA

>gi568815591r:40033062_40234567|GENSCAN_predicted_CDS_3|435_bp
atgggccaggtgtgctggctcacgcctgtaatccgagcactctgggaggccgagaatcag
aggaaataccaggcacctgttggccagttaaaaacgattagcatggctgctggacttaac
actcaggaacccagcccaactctagaactcacccctgagcgcaaaggcaatgtcgggtat
gctggtaaaggaccactagaatccagcagccccaacccctttctctgtggtcaagagagg
caggaaaagaggtgcaggactgctacatcaaatagaagctgtgaagctgtaaaactacaa
attgttcttcaaatagagccccagatgcagttcatgactaagatctaccacggacccctg
gaccagcctgctagcacatgctatgatgttgatgacaccgaaggcacccctcctgaggaa
atctcaactgcatga

>gi568815591r:40033062_40234567|GENSCAN_predicted_peptide_4|151_aa
MVCLEFVPSDIRTCLEFLPSGGILVSLTSGGKLQTLAMSVIAHKGGASRVVRSSSHSEIP
SYQYTTEEKVEEDGEKGTTCWDALIPEEQHCKQDIRKVDASRGRISAYTLGLDFLDHFHL
HVKKHKMKEHMERSSAETIIAAVPAEAHTSG

>gi568815591r:40033062_40234567|GENSCAN_predicted_CDS_4|456_bp
atggtgtgtctggagtttgttccttctgatattcggacatgtctggagtttcttccttct
ggtgggatcctggtctcgctgacttcaggagggaagctgcagaccttggccatgagtgtt
atagctcataaaggtggcgcgtccagagttgttcgttcctccagccattcagagattccg
agttaccagtacacaacagaggagaaagtagaggaggatggggagaaaggcacaacatgc
tgggatgctttgatacctgaggaacagcactgtaagcaggatattaggaaagttgatgcc
agcagaggcaggataagtgcttacacactggggcttgactttttggaccacttccatctt
catgtgaagaagcacaagatgaaagaacacatggagagaagttcagctgagactatcatt
gcagcagtcccggctgaggcccatacatctggatga