GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:54:45

Sequence gi568815590r:81593659_81794972 : 201314 bp : 38.28% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    155    150    6                               1.05
 1.02 Term -  12023  11923  101  0  2   96   50    50 0.670  -0.69
 1.01 Init -  13033  12913  121  1  1   31   58   146 0.655   6.30
 1.00 Prom -  20355  20316   40                              -2.45

 2.06 PlyA -  21956  21951    6                               1.05
 2.05 Term -  23765  23676   90  2  0   40   48   102 0.654  -1.86
 2.04 Intr -  24461  24299  163  1  1   -9   94   161 0.479   6.06
 2.03 Intr -  25158  25038  121  1  1   10   53   119 0.462  -0.77
 2.02 Intr -  26455  26350  106  1  1   86  100    36 0.965   3.47
 2.01 Init -  27796  27659  138  1  0   57   88   100 0.774   7.09
 2.00 Prom -  31444  31405   40                              -9.05

 3.00 Prom +  31614  31653   40                              -7.35
 3.01 Init +  37102  37315  214  0  1   72    5   188 0.674   8.16
 3.02 Intr +  39766  39986  221  2  2   52   78   119 0.256   4.40
 3.03 Term +  49040  49225  186  1  0   25   38   237 0.311   8.91
 3.04 PlyA +  49384  49389    6                               1.05

 4.12 PlyA -  50265  50260    6                               1.05
 4.11 Term -  65808  65693  116  1  2  112   32   129 0.997   7.45
 4.10 Intr -  67009  66858  152  0  2   52   98   172 0.901  13.49
 4.09 Intr -  77389  77281  109  2  1   70   94    61 0.664   3.32
 4.08 Intr -  80348  80183  166  2  1   51   97   104 0.429   6.21
 4.07 Intr -  82621  82576   46  0  1   35   86    14 0.227  -6.61
 4.06 Intr -  85572  85468  105  2  0   24   77   118 0.300   2.71
 4.05 Intr -  87125  86992  134  2  2   73   68    93 0.683   4.32
 4.04 Intr -  89904  89821   84  0  0   60   38    98 0.445   1.10
 4.03 Intr -  92206  92105  102  1  0   36   87    89 0.050   3.05
 4.02 Intr -  94321  94278   44  2  2   91   96    22 0.067   0.34
 4.01 Init - 101254 100990  265  1  1   59  102   174 0.484  13.12
 4.00 Prom - 104090 104051   40                              -5.05

 5.08 PlyA - 105129 105124    6                               1.05
 5.07 Term - 109207 109037  171  1  0  108   38    89 0.956   2.74
 5.06 Intr - 109466 109311  156  2  0   97   87     1 0.509   0.19
 5.05 Intr - 120381 120260  122  1  2   32   77   117 0.980   4.29
 5.04 Intr - 121237 121146   92  0  2   76  111   107 0.981  10.52
 5.03 Intr - 134588 134416  173  2  2   74  105   116 0.855   9.72
 5.02 Intr - 138628 138541   88  0  1   34   84    49 0.772  -1.85
 5.01 Init - 139193 138820  374  2  2   49   61   300 0.911  17.88
 5.00 Prom - 140345 140306   40                              -6.45

 6.00 Prom + 146941 146980   40                              -2.15
 6.01 Init + 154315 154365   51  0  0   60  101    -3 0.213  -0.59
 6.02 Intr + 155765 155798   34  1  1   69   99    33 0.739  -0.62
 6.03 Intr + 159406 159583  178  2  1   99   84   164 0.984  15.16
 6.04 Intr + 161712 161826  115  0  1   38   94   163 0.999  11.43
 6.05 Intr + 164484 164637  154  2  1  112   62   145 0.953  13.02
 6.06 Term + 164822 164886   65  0  2   75   37    98 0.878   0.47
 6.07 PlyA + 165851 165856    6                               1.05

 7.00 Prom + 174309 174348   40                              -5.35
 7.01 Sngl + 175459 175908  450  0  0   88   53   443 0.919  36.76
 7.02 PlyA + 176337 176342    6                               1.05

 8.00 Prom + 176872 176911   40                              -6.15
 8.01 Init + 177824 179202 1379  1  2   70   39   471 0.061  30.56
 8.02 Term + 186970 187105  136  1  1   64   42   180 0.383   7.51
 8.03 PlyA + 189524 189529    6                               1.05

 9.04 PlyA - 190093 190088    6                               1.05
 9.03 Term - 192557 192441  117  2  0   69   48    86 0.357   0.26
 9.02 Intr - 192725 192632   94  1  1   23  103    38 0.385  -2.15
 9.01 Init - 193684 193464  221  1  2   65   84    93 0.577   4.75
 9.00 Prom - 194730 194691   40                              -3.25


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  58584  58639   56  1  2   96   53    74 0.907   1.44
S.002 Init -  92257  92105  153  1  0   58   87   136 0.831  10.54
S.003 Sngl + 177824 179209 1386  1  0   70   43   451 0.914  34.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_1|73_aa
MCIAASGGAEAFYEMGIHCWDIAVAAIIVTEAGGVLMDVTGGPFHLMSRRIIAANCTALA
ERIAKEIQVAPFQ

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_1|222_bp
atgtgcattgcggcaagtggaggagcagaggcattttatgaaatgggaattcactgctgg
gatattgcagtagctgccattattgttactgaagctggtggcgtgctaatggatgttact
ggtggaccattccatttaatgtcacggagaataattgctgcaaattgtacagcattagca
gaaaggatagccaaagaaattcaggtagcaccttttcaatga

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_2|205_aa
MGGKKEKKKEKRFNPKKSLEKSKTMMCAWNSEMVMEREALEVAGAEIEFGVVYSCVEDKR
YTVRKGKGAFYNGQKLQVSQEELKEAGLLGASEGRKLHKDAARNARTSYRDGLRKTGRSL
CGKGPLRAGQGGHAYPKEWLWWARLLSMAAGEVANSAAYGFAPATLVTPLGTLSVLEWQD
MPIDDVTGTFDWLYNNRGDILVACF

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_2|618_bp
atggggggaaaaaaggaaaagaaaaaagaaaagcgttttaatccaaagaagagcttggag
aagtcgaagaccatgatgtgtgcatggaacagtgagatggtcatggagagggaagcactg
gaagtggccggggcagagatagaatttggagttgtgtacagttgtgtggaagacaagagg
tacactgtcaggaaaggaaaaggtgccttttataatggtcaaaaactacaggtttcacaa
gaagaactgaaggaagcggggcttcttggcgcttctgaagggagaaagctgcacaaggat
gccgccaggaatgctcgcacctcctaccgggatggcctgcgtaagacggggcggtctctg
tgcggaaaaggtcctctgagagcaggtcaaggtggccacgcatatcctaaagaatggttg
tggtgggctagactgctgtcaatggcagctggcgaggtggccaactcagctgcatatggg
tttgcaccggccacactggtgactccactaggaactctcagcgtcctagagtggcaagat
atgcccattgatgatgtcactggtacttttgactggctttacaataatcgtggggatatt
cttgttgcatgcttttaa

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_3|206_aa
MIPQKLPQGLSAVASANRYSNIGSVPGHPRAAPDNVAGKSHPDAAFAPGADRTPQTALAP
TPAERSAEPGEATVPNPKNVCRAQVLSGAGDSSTNSASWHDVQLLTLSTFPKGSSLLEAF
GILSCQLTPICERGCNYAEPQNEREPGPQEQNSVSGKKKKKKKKRKEKREEEGEEGEGEE
EEEDNNSGAKTLAKDHTENPKLVALF

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_3|621_bp
atgattccacagaagctgccacaggggttaagtgcagtggcgtccgcgaaccgctactcc
aacatcgggagtgttcctggtcaccccagggcagctccagataacgtggcaggcaagagt
cacccagatgcggccttcgccccaggggctgaccgcacaccgcagaccgccctcgccccc
accccagcagagagaagcgccgaacccggagaggccactgttcctaatcctaagaacgtc
tgccgtgcccaggtgttgtcgggggcaggggacagcagcacaaactctgcttcctggcat
gatgtccagctcctcactctttcaaccttccctaagggaagctccctcttggaggccttt
ggtatcctttcctgtcagctgactcccatctgtgagagaggttgtaattacgctgaacct
cagaatgaaagagagcctgggccacaggagcaaaactctgtctcaggaaaaaaaaaaaag
aagaagaagaagaggaaagagaagagagaagaagagggagaggaaggagaaggagaagaa
gaagaagaagacaacaactcaggtgctaagacacttgccaaagatcacacagaaaatccg
aaacttgtggccttgttttga

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_4|440_aa
MSSLSFLNIEKTEILFFTKTEETILVSSSYENKRPNSSHLFVKIEDPKILQMVNVAKKIS
SDATNFTINLVTDEEGETNVTIQLWDSEGPSLEWGSYDLNSDRVAKRKVAWLLRWKAVTR
TETAGNSSGVYGFGKMKTVTVIHTVARVGNLDIQIQRKSELFLSLVVCEAIKNEMNVMLK
SSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTT
NFVHRFPFVAVSIGFAVNKKKKVDETYLGLVKETCFPLQIEFGVVYSCVEGKMYTARKGK
GAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEKLFCIPVHGIRSVGTAA
VNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRI
LAERIAKEIQVIPLQRDDED

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_4|1323_bp
atgtcatcgctcagttttctgaatatagagaagactgaaatactatttttcacaaagact
gaagaaaccatccttgtaagttcaagctacgaaaataaacggcctaattccagccacctc
tttgtgaaaatagaagatcctaaaatactacaaatggtgaatgtggccaagaagatctca
tcagatgctacaaactttaccataaatctggtgactgatgaagaaggagaaacaaatgtg
actattcaactctgggattctgaaggaccctctttggaatgggggtcttatgacctaaac
tcagacagggtggcaaaaaggaaggtggcctggctcctacgctggaaggctgtgaccagg
acagaaacagcaggaaacagttcaggtgtttatggctttgggaaaatgaaaactgtgacg
gttatccatacagttgccagagtgggaaatctggacatccagattcagaggaaatctgaa
ctcttcctgtccctggtagtttgtgaagctataaaaaatgaaatgaatgttatgctgaaa
agttctccagttgatttggtaactgctacggaccaaaaagttgaaaaaatgcttatctct
tccataaaggaaaagtatccatctcacagtttcattggtgaagaatctgtggcagctggg
gaaaaaagtatcttaaccgacaaccccacatggatcattgaccctattgatggaacaact
aactttgtacatagatttccttttgtagctgtttcaattggctttgctgtaaataaaaag
aaaaaagtggatgaaacatacttaggtttggtaaaggaaacttgttttcctctgcagata
gaatttggagttgtgtacagttgtgtggaaggcaagatgtacactgccagaaaaggaaaa
ggtgccttttgtaatggtcaaaaactacaagtttcacaacaagaagatattaccaaatct
ctcttggtgactgagttgggctcttccagaacaccagagactgtgagaatggttctttct
aatatggaaaagcttttttgcattcctgttcatgggatccggagtgttggaacagcagct
gttaatatgtgccttgtggcaactggcggagcagatgcatattatgaaatgggaattcac
tgctgggatgttgcaggagctggcattattgttactgaagctggtggcgtgctaatggat
gttacaggtggaccatttgatttgatgtcacgaagagtaattgctgcaaataatagaata
ttagcagaaaggatagctaaagaaattcaggttatacctttgcaacgagacgacgaagat
taa

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_5|391_aa
MGSRLWARPQPTSLILRAVLLGQGDFSLDSIFQVLLFLAQHLLSLPKSDQGLLGTGSGSA
LRRAAPFKELAQLAHCCGVRRASDPGGLSGAPRGRAEGTGEQGSPLGDPDRKGGPPGNQQ
VVLDRDGPRNEELVCEWLKEKQTDVQGSCAGPESSFTIPEYNHMRFVPNQEIHLISPILL
LYLLVNNSRLPFSQAKNLGVNLDPHPIHQQIPHRHQSDHECEKLEIPKPRMAATQKLVKD
IIDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLPKGSKEK
SKPMFFCHRWSIGKAIDFAASLARLKNDNNKFTAKKLRLCHITSGEALPLDHTLETWIAK
EDCPLYNGGNIILEYLNDEEQFCKNVESYLE

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_5|1176_bp
atgggctcccgcctgtgggccagaccccagcctacctcgcttattctgcgtgccgtgctt
cttggccagggcgatttctctctggattcgattttccaggtactcttgtttcttgcccag
catctcctcagtctcccgaagtcggaccagggcctcctggggactgggagcggctcggct
cttagaagagccgccccctttaaagaacttgcccaacttgctcattgctgtggagttcgg
agggccagcgatcccgggggcctctcgggagctccccggggccgcgccgaggggacaggt
gagcaaggcagtcctctcggggacccagaccggaaaggcggccctcctgggaatcaacaa
gtcgtcctggacagggacggtcccaggaacgaggaactagtttgtgaatggctcaaagaa
aagcaaaccgatgtccaggggtcttgtgcaggacctgaaagtagtttcactataccggag
tacaatcacatgagatttgtacctaatcaagaaatacacctaatctctccaatcctgctc
ctctacctcttagttaataactccaggcttcctttttctcaggccaaaaaccttggagtc
aaccttgacccacatcccatccatcagcagatcccacaccgtcatcagtcagatcatgag
tgtgaaaaactggaaatcccaaagcctcgaatggctgccactcagaaacttgttaaagac
attattgattccaagacaggagaaacagcaagtaaacgatggaaaggtgccaaaaatagt
gaaacagctgcaaaggttgcattgatgaaattaaagatgcatgctgatggcgataagtca
ttaccacagacagaaagaatttactttcaggttttcttacctaaagggagcaaagagaag
agcaaaccaatgttcttttgccaccgatggagcattggaaaggccatagactttgccgct
tctctagccaggcttaaaaatgacaataacaaatttacagctaagaaattaaggctgtgt
cacattacttcaggagaagccttacccttggatcatactttggaaacctggattgctaag
gaggattgtcctttatataatggtggaaatataatcttggaatatcttaatgatgaagaa
caattctgtaaaaatgttgaatcttacttggaatag

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_6|198_aa
MGDRSLSHLCNLDHKRQVPGNGQGAGETAALQALKRKKRFEKQLTQIDGTLSTIEFQREA
LENSHTNTEVLRNMGFAAKAMKSVHENMDLNKIDDLMQEITEQQDIAQEISEAFSQRVGF
GDDFDEDELMAELEELEQEELNKKMTNIRLPNVPSSSLPAQPNRKPGMSSTARRSRAASS
QRAEEEDDDIKQLAAWAT

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_6|597_bp
atgggagaccggagtctatctcacctctgcaatctcgaccataaaagacaggtgccagga
aatggacaaggtgctggggaaacagctgcattacaggcactaaagagaaagaagaggttc
gagaaacagctcactcagattgatggcacactttctaccattgagttccagagagaagcc
ctggagaactcacacaccaacactgaggtgttgaggaacatgggctttgcagcaaaagcg
atgaaatctgttcatgaaaacatggatctgaacaaaatagatgatttgatgcaagagatc
acagagcaacaggatatcgcccaagaaatctcagaagcattttctcaacgggttggcttt
ggtgatgactttgatgaggatgagttgatggcagaacttgaagaattggaacaggaggaa
ttaaataagaagatgacaaatatccgccttccaaatgtgccttcctcttctctcccagca
cagccaaatagaaaaccaggcatgtcgtccactgcacgtcgatcccgagcagcatcttcc
cagagggcagaagaagaggatgatgatatcaaacaattggcagcttgggctacctaa

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_7|149_aa
MGKKQNRKTGNSKKQSTSPPPKERSSSPAMEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRSDQLEERVSA
MEDEMNEMKREGKFREKRIKRNEQSLQEI

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_7|450_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaaagcagagcacctctcctcct
ccaaaggaacgcagttcctcaccagcaatggaacaaagctggatggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgaagcgatcaactggaagaaagggtatcagcg
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatga

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_8|504_aa
MDTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEW
VPFLLKLFQSIEKEGILPNSFYEASIILIPKTGRDTTKKENFRPISLMNIDAKILNKILA
KRIQQHIKKLIHHDQVGFIPGMQGWFNIHKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIALEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISKFSKV
SGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPP
LKEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMPFFTELEKTTLKLI
WNQKRARITKSILSQKNKAGGITLPDFKLYYKATVTKTACFFLYKMLSLLPLVVPTRRHS
KLIVNARTEHLLKSAAGISVVQNW

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_8|1515_bp
atggatacgttcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaatagcttaccaacaaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaatgg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactct
ttttatgaggccagcatcattctgataccaaagacaggcagagacacaacaaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaacgaatccagcagcacatcaaaaagcttattcaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatacacaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatttcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagcgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataagcaaattcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccaccg
ctcaaggaaataaaagaggatacaaacaaatggaagaacatcccatgctcatgggtagga
agaatcaatatcatgaaaatggccatactgcccaaggtaatttacagattcaatgccatc
cccatcaagctaccaatgcctttcttcacagaattggaaaaaactactttaaagttgata
tggaaccaaaaaagagcccgcatcaccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgt
tttttcctctacaaaatgttgtcactgctgccgctcgttgttcccactaggcggcactct
aagctcatcgtcaatgcgaggaccgagcacctgctaaaatctgcggcaggcatctccgtt
gtgcaaaattggtaa

>gi568815590r:81593659_81794972|GENSCAN_predicted_peptide_9|143_aa
MAEEELEDRGRSEGLPPIELIKVCMVKEDKSYNIVWTQAAERERKMTRRIWQIKLNQTKA
RRHKSTQSGRFIICGANSFAFLSLSPHLKGDNNSAPQSGLLKEEQVSVDVVEVLSGAVRV
FHAHIKMFASQRFMPHPVPAKLL

>gi568815590r:81593659_81794972|GENSCAN_predicted_CDS_9|432_bp
atggctgaagaggagttagaagacagaggaagaagtgagggtttgcctccaattgaatta
ataaaagtatgcatggtaaaagaagacaaaagttacaatatcgtatggactcaagcagct
gagagggaaagaaagatgaccaggagaatatggcagataaaactgaaccagacaaaagca
agaaggcacaaaagcactcagtctggaaggtttataatctgtggggcaaattcctttgca
tttctgagcctcagtcctcatttaaagggagacaacaatagtgccccccaatctggttta
ttgaaagaagaacaggtcagtgtggatgttgtggaggtgttaagtggggcagtgcgtgtt
ttccatgcccacataaaaatgtttgccagtcagagatttatgcctcatccagtgcccgct
aagctgctatga