GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:25:28

Sequence gi568815596f:72787433_72991534 : 204102 bp : 46.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -  38463  38366   98  0  2   89   80   177 0.815  16.79
 1.00 Prom -  49399  49360   40                              -4.56

 2.00 Prom +  60016  60055   40                              -2.26
 2.01 Init +  63597  63738  142  2  1   46   50   111 0.225   3.40
 2.02 Term +  87761  87945  185  0  2   71   51   109 0.674   3.21
 2.03 PlyA +  89090  89095    6                               1.05

 3.00 Prom +  97090  97129   40                              -4.26
 3.01 Init + 100001 100304  304  1  1   84   94   591 0.975  54.74
 3.02 Intr + 100882 101172  291  2  0   44   96   344 0.968  27.91
 3.03 Term + 103915 104105  191  2  2  129   46   347 0.999  32.21
 3.04 PlyA + 104704 104709    6                               1.05

 4.00 Prom + 110260 110299   40                              -3.86
 4.01 Init + 130421 130940  520  1  1   26   96   799 0.396  67.53
 4.02 Intr + 132647 133078  432  0  0   39  -68   363 0.036   9.42
 4.03 Intr + 133593 133691   99  1  0   98   16    91 0.042   2.98
 4.04 Intr + 136877 137061  185  0  2    1   89   413 0.067  32.21
 4.05 Intr + 138176 138271   96  1  0  119    2    63 0.404   1.01
 4.06 Term + 146355 146522  168  2  0   94   46   352 0.999  29.48
 4.07 PlyA + 146894 146899    6                               1.05

 5.07 PlyA - 147074 147069    6                              -3.64
 5.06 Term - 149953 149830  124  0  1  124   55    91 0.742   7.26
 5.05 Intr - 157667 157594   74  2  2  144   62    84 0.907   9.60
 5.04 Intr - 173816 173699  118  1  1  136   78    97 0.947  13.97
 5.03 Intr - 181101 181016   86  0  2  116   81   176 0.926  18.32
 5.02 Intr - 184253 184138  116  0  2  121   44   215 0.904  20.57
 5.01 Init - 184643 184520  124  2  1   74  123    34 0.692   6.05
 5.00 Prom - 190103 190064   40                              -3.56

 6.03 PlyA - 194514 194509    6                               1.05
 6.02 Term - 195688 195558  131  2  2  102   44    69 0.120   2.24
 6.01 Intr - 200916 200826   91  0  1   80   82    73 0.649   5.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 136732 137061  330  0  0   93   89   380 0.819  33.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:72787433_72991534|GENSCAN_predicted_peptide_1|33_aa
MAEAESLETAAEHERILREIESTDTACIGPTLS

>gi568815596f:72787433_72991534|GENSCAN_predicted_CDS_1|99_bp
atggcggaggcggagagcctggagacagcggcagagcacgagcggatcctgcgagagatc
gagagcactgacacggcctgcatcgggcccacgctcagn

>gi568815596f:72787433_72991534|GENSCAN_predicted_peptide_2|108_aa
MHGCLERPSSIHSCTNGGFLGHSLDVEAEYTGSSMVCPQDEKEETHTATLAADYMVPTQI
EGGSASPSPLTQTLISFGNTLTDTQEQYFASFDPIKLTLSINHHNICI

>gi568815596f:72787433_72991534|GENSCAN_predicted_CDS_2|327_bp
atgcatggatgccttgaacgtccaagctccatccacagctgcacaaacggcggcttcctt
ggccactctttagatgtagaggctgaatataccggcagcagcatggtctgccctcaggat
gagaaggaagagacccacacagccacactggcagctgattacatggtgcccacccagatt
gagggtgggtcagcctctcccagtccactgactcaaacgttaatctcctttggcaacacc
ctcacagacacccaggaacaatactttgcatccttcgatccaatcaagttgacactcagt
attaaccatcacaacatctgcatctga

>gi568815596f:72787433_72991534|GENSCAN_predicted_peptide_3|261_aa
MEGGLGRAVCLLTGASRGFGRTLAPLLASLLSPGSVLVLSARNDEALRQLEAELGAERSG
LRVVRVPADLGAEAGLQQLLGALRELPRPKGLQRLLLINNAGSLGDVSKGFVDLSDSTQV
NNYWALNLTSMLCLTSSVLKAFPDSPGLNRTVVNISSLCALQPFKGWALYCAGKAARDML
FQVLALEEPNVRVLNYAPGPLDTDMQQLARETSVDPDMRKGLQELKAKGKLVDCKVSAQK
LLSLLEKDEFKSGAHVDFYDK

>gi568815596f:72787433_72991534|GENSCAN_predicted_CDS_3|786_bp
atggagggcgggctggggcgtgctgtgtgcttgctgaccggggcctcccgcggcttcggc
cggacgctggccccgctcctggcctcgctgctgtcgcccggctccgtgcttgtccttagc
gcccgcaacgacgaggcactgcgccagctggaggccgagctgggcgccgagcggtctggc
ctgcgcgtggtgcgggtgcccgccgacctgggcgccgaggccggcttgcagcagctgctc
ggcgccctgcgcgagctcccccggcccaaggggctgcagcgactgctgcttatcaacaac
gcgggctctcttggggatgtgtccaaaggcttcgtggacctgagtgactccactcaagtg
aacaactactgggcactgaacttgacctccatgctctgcctgacttccagcgtcctgaag
gccttcccggacagtcctggcctcaacagaaccgtggttaacatctcgtccctctgtgcc
ctgcaacctttcaaaggctgggcgctgtactgtgcaggaaaggctgctcgtgatatgctg
ttccaggtcctggcgctggaggaacctaatgtgagggtgctgaactatgccccaggtcct
ctggacacagacatgcagcagttggcccgggagacctccgtggacccagacatgcgaaaa
gggctgcaggagctgaaggcaaaggggaagctggtggattgcaaggtgtcagcccagaaa
ctgctgagcttactggaaaaggacgagttcaagtctggagcccacgtggacttctatgac
aaataa

>gi568815596f:72787433_72991534|GENSCAN_predicted_peptide_4|499_aa
MCLAGCTPRKAAAPGRGALPRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTG
GGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFP
EAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQAVQLVRS
RHPGPHPRLRIQPLTPSAPRFLPPGAEGRGRLERNPAPALSVSSQARRINPSQNPLGNCR
RFLSHQSQRVRYRVAQTVGFFPQEPSLDAEMEPSVAAFSDPEIRWALKDFSNPVALLLRG
PSSPLQTDALPGGSTPSTLGPSAQPSGPEPLAGGGLSSEDCGSKTAARTPASDVPQDGLL
LHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQSRPYYTTV
PSQVPGSEKMPGMGGSRSLPLAARVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINR
WRIATKQANGEDIDVTSND

>gi568815596f:72787433_72991534|GENSCAN_predicted_CDS_4|1500_bp
atgtgcctggctgggtgcacaccccgcaaggcggcggcgccaggacgcggagcgctcccc
agagcccggctgcctcgcacagctcccgcggctgcgaccatgttccagcccgcggccaag
cgcggctttaccatagagtccttggtggccaaggacggcggcaccggcgggggcactggc
ggcgggggcgcgggctcccatctcctggcggcggccgcctccgaggaaccgctccggccc
acggcgctcaactaccctcaccccagcgcggccgaggcggccttcgtgagtggcttccct
gccgcggccgccgcgggcgcgggccgctcgctctacggtgggcccgagctcgtgttcccc
gaggccatgaaccaccccgcgctgaccgtgcatccggcgcaccagctgggcgcctccccg
ctgcagcccccgcactccttcttcggcgcccagcaccgggaccctctccatttctacccc
tgggtcctgcggaaccgcttcttcggccaccgcttccaggccgttcagcttgtccggagt
cggcatcctgggccgcaccctcggcttcgaatccagcccctgacgccctccgcaccgcgg
ttcctgcctccgggcgccgagggccgggggcgcctggagagaaatccagctccggctctg
agcgtctccagtcaggcgaggcggataaatccttcgcaaaaccctcttggaaattgccgc
cgcttcctgagccatcagtcccagcgggtacgttatcgagtagcacaaacagttggattt
ttccctcaagaaccgagtctggacgcggagatggagccaagtgtggctgcattttcggac
ccggaaatccgttgggcactgaaggacttttcgaaccctgtagcgctgttgcttcgcggt
ccatcgtcgccgctgcagacggatgcgctccccggcggctctacgccctccaccctaggg
ccctccgcccagccgtccggccctgagcccctggccggcggcggcctctccagcgaagac
tgcggctcgaagactgcagctcggaccccggccagcgacgtgccccaggacgggctgctt
ctgcacggccccttcgcacgcaagcccaagcggatccgcacggccttctcgccctcgcag
ctgctgcggctggagcgcgccttcgagaagaaccactacgtggtgggcgccgagcggaag
cagctggccggcagtctcagcctctccgagacgcagtctcgaccctactacaccaccgtc
ccctcccaagtcccgggcagtgagaagatgcccggcatggggggcagccggagcctccct
ttagcagccagagtgaaggtgtggttccagaaccggaggacaaagtacaaacggcagaag
ctggaggaggaagggcctgagtccgagcagaagaagaagggctcccatcacatcaaccgg
tggcgcattgccacgaagcaggccaatggggaggacatcgatgtcacctccaatgactag

>gi568815596f:72787433_72991534|GENSCAN_predicted_peptide_5|213_aa
MVEHQASGSGGMRLQVREPSQMDTHFACLVGLPWRRGKQPLASANICNVVLMRYGELEEG
IDVLDSDGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLL
LPVQSLVCLAAFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGLDALEQGY
SRGLWALAGSLWAEPGSLSQSALMPPGKRSQHV

>gi568815596f:72787433_72991534|GENSCAN_predicted_CDS_5|642_bp
atggtggaacatcaggcctcggggtcaggggggatgcgacttcaggtcagagagccctcc
cagatggacacccactttgcctgcctagtgggcttgccctggaggagaggaaagcagccc
ctcgccagtgccaatatctgcaatgtggtcctgatgcggtacggggagctggaggaaggg
attgatgtcctggacagcgatggcaacctcgtgggctcctccaagatcgcagcccgacac
gccctgctggagacggcgctgacgcgagtggtcctgcccatgcccatcctggtgctaccc
ccgatcgtcatgtccatgctggagaagacggctctcctgcaggcacgcccccggctgctc
ctccctgtgcaaagcctcgtgtgcctggcagccttcggcctggccctgccgctggccatc
agcctcttcccgcaaatgtcagagattgaaacatcccaattagagccggagatagcccag
gccacgagcagccggacagtggtgtacaacaaggggttggatgccctggagcagggctac
agcagaggcctgtgggccctggccggctccctctgggcagagcccggttcacttagccag
agcgccttgatgcctcctgggaagcggtcccagcacgtgtga

>gi568815596f:72787433_72991534|GENSCAN_predicted_peptide_6|73_aa
VGLNVLVQKANKFTPATRLLIQRFVPFPAVGVAMAVLPKSGGPTPRSEHSSPGLIPCEQE
AAVCTCGSLSWAL

>gi568815596f:72787433_72991534|GENSCAN_predicted_CDS_6|222_bp
gtgggccttaatgtcctggttcagaaagccaacaagttcaccccagccacccgccttctc
atccagaggtttgtgccgttccctgctgtaggagtggccatggcagtgctgcccaagtct
ggagggcctacccccaggtcagagcacagctccccaggcctcatcccctgtgagcaggag
gcagcagtgtgcacctgtggcagcttgtcctgggccctgtga