GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:25:32

Sequence gi568815595f:98164285_98365259 : 200975 bp : 37.41% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4416   4680  265  2  1   78   52   112 0.309   3.82
 1.02 Intr +   5026   5188  163  2  1  102   48    57 0.230   1.21
 1.03 Intr +  13242  13367  126  0  0   31   72   105 0.158   2.07
 1.04 Intr +  14063  15501 1439  2  2   44   60   281 0.294   9.19
 1.05 Intr +  22606  22716  111  2  0   69   68    73 0.378   2.83
 1.06 Intr +  27169  27326  158  2  2   66  106    22 0.758   0.61
 1.07 Intr +  29145  29214   70  2  1   31  110   100 0.664   4.34
 1.08 Intr +  29655  29774  120  1  0   79   92    57 0.892   4.75
 1.09 Intr +  31372  31448   77  2  2   63   65    64 0.193  -0.08
 1.10 Term +  31776  31886  111  2  0   78   35    55 0.300  -3.22
 1.11 PlyA +  32445  32450    6                               1.05

 2.00 Prom +  35710  35749   40                              -2.55
 2.01 Init +  36386  36471   86  1  2   59  108    41 0.907   3.54
 2.02 Term +  37543  37726  184  1  1   81   54   143 0.956   6.23
 2.03 PlyA +  40009  40014    6                               1.05

 3.00 Prom +  46072  46111   40                              -5.15
 3.01 Init +  64542  64629   88  2  1   85   71   118 0.818  10.65
 3.02 Intr +  80036  80116   81  0  0   55   56    91 0.399   1.29
 3.03 Intr +  80300  80520  221  0  2   78   30   121 0.602   2.40
 3.04 Intr +  81019  81165  147  0  0  106   47    48 0.713   2.01
 3.05 Intr +  81280  81493  214  0  1   27   80   130 0.443   3.47
 3.06 Term +  95613  95875  263  1  2   86   45   214 0.851  11.60
 3.07 PlyA +  97395  97400    6                               1.05

 4.03 PlyA -  98453  98448    6                               1.05
 4.02 Term - 106028 105782  247  1  1   -4   53   203 0.195   1.88
 4.01 Init - 126651 126338  314  0  2   60   64   220 0.150  13.64
 4.00 Prom - 144409 144370   40                              -3.75

 5.07 PlyA - 144530 144525    6                               1.05
 5.06 Term - 152683 152475  209  2  2   98   50   116 0.334   5.32
 5.05 Intr - 165111 164965  147  1  0   31   64   110 0.001   2.19
 5.04 Intr - 165347 165203  145  2  1   30   91   102 0.010   3.63
 5.03 Intr - 170081 169968  114  2  0   70   83    41 0.028   1.52
 5.02 Intr - 196659 196566   94  2  1   13   86   111 0.076   2.45
 5.01 Init - 198902 198835   68  2  2   65   30   124 0.394   4.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 162573 162687  115  2  1   73   66    94 0.955   6.12
S.002 Intr + 163348 163568  221  2  2   58   93   108 0.931   5.40
S.003 Intr + 165219 165325  107  0  2   64   81    90 0.860   4.84


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:98164285_98365259|GENSCAN_predicted_peptide_1|879_aa
MEEENATLLTEFVLTGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMY
LLLGNLAFVDAWISSTVTPKMLNNFLAKSSIQVFSIVTILISYTFVLFTVLEKKSDKGVR
KAFSTCGAHLFSVCLYYGPLLLILNQEEVEFLNRPTGFEIVAIINSLLTKKSPGPDGFTA
EFYQRPKSPSVYKQLQQSLRIQNHVQKSQAFLYTNNRQTESQIMSDLPFTIASKRIKYLG
IQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRTNIMKMAILPKVIYRFNAIPN
KLPMAFFTELEKTTLKFIWSQKRAHITKSVLSQKNKAGGSTLPDFKLYYKATVTKTAWYW
YQNRDIDQWNRTQPSEIMPHIYNHLIFDKPDKNKKWGKDSLFNKWCWENWLAICRKLKLD
PFLTPYTKVNSRWIKDLHVRHKTIKTLEENLGNTIQDIGMGKDFMSKTPKATATKAKIDK
WDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTNNPIK
KWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHLTPVRMTIIKMSGNNRC
WRRCGEIGTLLHCWLDCKLVQPLWKSVWRFLRDLELEIPFDPAIPLLGIYPKDYKSCCYK
DTCTRTDLAQEDSHHCKMAETKTQYCHAVTGHVPKDMKQDGDPCEIWCRDSDRGTSLGRS
IPGPPALCYMRKIHLRPLVLRPTSPRNISPILNWQLKTEAARTPQKPPGPSQMLTVEAYF
NRIKACYHSPATAWASKTYKLSLNSCILPVQNRTSLTGSWSHSLQRLSKASDPIALGNAY
ADKGLFRPPPSPTHQDGGFAPAQDWQIDFTHVPRVKKLK

>gi568815595f:98164285_98365259|GENSCAN_predicted_CDS_1|2640_bp
atggaagaggaaaatgcaacattgctgacagagtttgttctcacaggatttttatatcaa
ccacagtggaaaatacccctgttcttggcattcttggtaatatatctcatcaccatcatg
gggaatcttggtctgattgctgtcatctggaaagaccctcaccttcatatcccaatgtac
ttactccttgggaatttagcttttgtggatgcttggatatcatccacagtgaccccaaag
atgctgaataacttcttagctaagagttcaattcaggtattcagcattgtgactattctt
atatcttacacatttgttctcttcacagtcttagaaaagaaatctgataagggtgtaagg
aaagccttttccacctgtggagcccatctcttctctgtctgtttatactatggccccctt
ctcttaatactaaaccaggaagaagttgaatttctgaatagaccaacaggctttgaaatt
gtggcaataattaatagcttgctaaccaaaaaaagtccaggaccagatggattcacagct
gaattctaccagaggccaaaatctccttcagtttataagcaacttcagcaaagtctcagg
atacaaaatcatgtacaaaaatcacaagcattcttatacaccaacaacagacaaacagag
agccaaatcatgagtgacctcccattcacaattgcttcaaagagaataaaatacctagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaat
gaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaacc
aatatcatgaaaatggccatactgcccaaggtaatttatagattcaatgccatccccaac
aagctaccaatggctttcttcacagaattggaaaaaactactttaaagttcatatggagc
caaaaaagagcccacatcaccaagtctgtcctaagccaaaagaacaaagctggaggcagc
acgctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactgg
taccaaaacagagatatagatcaatggaacagaacacagccctcagaaataatgccgcat
atctacaaccatctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattcc
ctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggat
cccttccttacaccttatacaaaagttaattcaagatggattaaagacttacatgttaga
cataaaaccataaaaaccctagaagaaaacctagggaataccattcaggacataggcatg
ggcaaggacttcatgtctaaaacaccaaaagcaacggcaacaaaagccaaaattgacaaa
tgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaac
aggcaacctacaaaatgggagaaaatttttgcaacctactcatctgacaaagggctaata
tccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaa
aagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagcaaaaaaa
cacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatg
agataccatctcacaccagttagaatgacgatcattaaaatgtcaggaaacaataggtgc
tggagaagatgtggagaaataggaacacttttacactgttggttggactgtaaactagtt
caaccattgtggaagtcagtgtggcgattccttagggatctagaactggaaataccattt
gacccagccatcccattactgggaatatacccaaaggattataaatcatgctgctataaa
gacacatgcacacgaactgacttagcacaagaagacagccaccattgtaaaatggcggag
actaaaacacagtattgccatgcggttacaggtcatgttcccaaagacatgaaacaagac
ggagacccatgtgaaatttggtgccgtgactcagatcgggggacctcccttgggagatca
atccctggtcctcctgctctttgctacatgagaaagatccacctacgacctctggtcctc
agaccaaccagtccaaggaatatctcaccaattttaaattggcagctgaagactgaggct
gcccgaacacctcagaagcctcctggaccatcacagatgcttacagtggaggcatacttt
aataggattaaagcctgttatcactcgcctgctacagcatgggcttctaaaacctataaa
ctttccttaaattcctgcattttacctgtccaaaaccggacaagtcttacaggaagctgg
agtcattcactacaaaggctatcaaaggcatcagatcccattgctctaggcaacgcttat
gctgataagggattgttcaggccccctccctcccctacacatcaagatgggggatttgcc
cctgcccaggactggcaaattgactttactcacgtgccccgagtcaagaaactaaaataa

>gi568815595f:98164285_98365259|GENSCAN_predicted_peptide_2|89_aa
MTVKKEFYRSMDGSFNRRIVHREDISVSKSYGLQSSACSSQDATVASGYTGLRSPGSSVS
IDLRKIAPFGSLCGGSDPVTRLCLGVEII

>gi568815595f:98164285_98365259|GENSCAN_predicted_CDS_2|270_bp
atgacagtcaagaaggaattctataggtccatggatggtagcttcaacagaagaattgtg
catagggaagacatttctgtatccaagtcctatggattgcagtccagtgcctgtagttct
caggatgccactgtagctagtggctataccggtctgaggtctcctggcagctctgtttcc
atagatctacggaaaattgccccatttgggagtctctgtggtggctctgaccctgtgaca
cgtctctgcttgggtgttgagattatctga

>gi568815595f:98164285_98365259|GENSCAN_predicted_peptide_3|337_aa
MQPEATGFLLCPVTPMDIITIVKSEFGVQDTGNIWCRRPVTGELLRESSPLSSCSHQTKG
DTFYPCIQKLRRRSRTWEDSLPLVSDHRGDACCGHSPTFPWWQVNRKDACFGCSPTLQPR
TQSGVPTGSLAESGANSSAASTPPSYNPSITSPPHTESGLQFHSTTSSPQPAQQFPLREE
FQYLTQSYSLTWSDLNVILTSTLSPYERERVHFLAQSYSDTCWLHEPGLQEGTRAVPRED
LHWQYQTDSPGRGASTCCHCHPWSQGVLQDYPGCSLKAQGLLNQLVVKLPSLRLTLQAVG
SPQAQGKSRNIVEESTARIEDLKSQLGALPNCGDVRT

>gi568815595f:98164285_98365259|GENSCAN_predicted_CDS_3|1014_bp
atgcagccagaagccacaggattcctactctgcccagttactcctatggatatcattact
attgtcaaatccgagtttggtgttcaagacacgggtaacatttggtgtcgaagacccgtg
acaggggaactcctacgggagagcagtcccctgtcctcgtgctcccaccagacaaaagga
gacacattttatccgtgcattcaaaaactccgacgtcggtcacggacatgggaagacagt
cttcccttggtgtctgatcaccgcggtgacgcctgctgtggtcattcacccaccttccct
tggtggcaggtcaatcgcaaggacgcctgctttggctgctcacccacattacagcccagg
actcagtcaggggtgcctactggaagcctggctgaatcaggtgccaattcttccgcagcc
tccactccaccatcctataacccttctattacctcccctcctcacaccgagtctggctta
cagtttcattccacgactagctccccgcaacctgcccaacaatttcctcttagagaggaa
ttccaatatctaactcagtcctacagtttaacctggagtgacttaaatgtcatcctgacc
tctaccctctccccgtatgaacgagaaagagttcattttctagcccagtcctactcagac
acctgctggcttcatgagccaggcctccaagagggcaccagggcagttccccgagaggat
ctccattggcaataccagacggactcaccaggcagaggagcctccacctgttgccactgc
cacccctggtcacaaggagtactgcaagactaccctggatgttcccttaaggcccaagga
ctcttaaatcagcttgtggtaaagctgcctagcctgagactcacccttcaggcagtgggc
tcccctcaagcccagggaaagtctagaaatattgttgaagagtcaactgctagaattgag
gacctaaagagccagcttggtgctctacccaactgtggtgatgttcgtacctaa

>gi568815595f:98164285_98365259|GENSCAN_predicted_peptide_4|186_aa
MNFPELKEHIIAQCKKAKNHDKMMQVVTGKIASTKRNITDLIQLKNTLQELHNAITSIDS
RIDQVEKKISELEDYLSEIKQADRNREKRMKRNKQNLKELRDGIMHEGTNPAEIEIWKLS
DREFKITVLKKLRETQNNTKKEFRMISMKFNKEIERSKNNQTENLELKNAIGILKNALEP
FNSKMD

>gi568815595f:98164285_98365259|GENSCAN_predicted_CDS_4|561_bp
atgaacttccctgagctaaaggagcacattatagcccaatgcaagaaagctaagaatcat
gataaaatgatgcaggtggtgacaggcaaaatagccagtacaaagagaaatataactgac
ctgatacagctgaaaaacacactacaagaacttcacaatgcaatcacaagtatcgatagc
agaatagaccaagtggagaaaaaaatctcagagctcgaagactatctttctgaaataaaa
caggcagacaggaatagagaaaaaagaatgaaaaggaataaacaaaacctcaaagaatta
cgggatgggattatgcacgagggaaccaatcctgcagaaatagaaatatggaagctctca
gacagagaattcaaaataactgtgttgaagaaactcagggaaactcaaaataacacaaag
aaggaattcagaatgatatcaatgaaatttaacaaagagattgaaagaagtaaaaataat
cagacagaaaatctggagctgaaaaatgcaattggcatactgaagaatgcattagagccc
tttaatagcaaaatggattga

>gi568815595f:98164285_98365259|GENSCAN_predicted_peptide_5|258_aa
MASWDEKDLTVPQPNTRKVSALRKDFKGMLPAWAAFIINKLKRIWALNASSDTQSSTEQF
YSSTGGIILTPPHLQTKKEAERVSDLVKVIWLGRAVIPSPGLLVGLGKSPPIAGTLPKIF
VVVIVVAKSFRPWGSLRERPALSVFRESVGSSSFQVQSTDSTLALLSPHPWGARTCSQLP
PSDAQGWVPETCIVWNQGLRDLGLCRMCLVNSTFTGSMLGKSHRHSPFSINQGHNALQKA
TGTSAQESRVLSKVSKIA

>gi568815595f:98164285_98365259|GENSCAN_predicted_CDS_5|777_bp
atggcctcgtgggatgagaaagacctgaccgtcccccagcccaatacccgtaaagtgtct
gcgctgaggaaggattttaaaggaatgctgccagcctgggcagcattcatcatcaacaag
ctgaagcgcatttgggccctaaatgccagcagcgatacacagagttctacagaacagttc
tacagttctacagggggtattattctcacccctccccacttacaaacgaagaaagaggca
gagagagtttctgatttagtcaaggttatatggttaggaagagctgtgatcccctcacca
ggtctgctcgtgggccttgggaagtcacctccgattgctggcactctgcctaagattttt
gttgttgtcattgttgttgctaagtctttcaggccatggggctcccttagggagaggcca
gccctctcagtcttccgagagagtgtgggatcctcctcctttcaagtgcaaagcacagat
tccaccttggcactcctgagcccacatccttggggcgccaggacctgttctcagctccct
ccttcggatgctcagggttgggttccagaaacatgtattgtatggaatcaaggtttaagg
gacctagggctgtgcaggatgtgccttgttaatagtacgtttacaggcagtatgcttggt
aaaagtcatcgccattctccattctcaattaaccaggggcacaatgcactgcagaaagcc
acagggacctctgctcaggaaagtcgggtattgtccaaggtttctaagatagcctga