GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:28:35

Sequence gi568815587r:123705411_123906349 : 200939 bp : 38.84% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    510    505    6                               1.05
 1.07 Term -  16340  16164  177  2  0  100   55   167 0.808  11.30
 1.06 Intr -  21581  20710  872  0  2  107   -3   740 0.170  56.92
 1.05 Intr -  22185  22066  120  1  0   41   94   104 0.876   5.85
 1.04 Intr -  22912  22723  190  1  1   30   47   234 0.681  11.74
 1.03 Intr -  23804  23644  161  0  2  108   72   134 0.820  12.59
 1.02 Intr -  24499  24205  295  1  1   54   44   314 0.762  19.26
 1.01 Init -  25478  25077  402  2  0   66   68   435 0.955  35.97
 1.00 Prom -  28332  28293   40                              -5.75

 2.00 Prom +  37372  37411   40                              -4.45
 2.01 Init +  38467  38490   24  0  0   93   67    48 0.043   2.78
 2.02 Term +  48524  48871  348  1  0    3   43   484 0.101  28.90
 2.03 PlyA +  49028  49033    6                               1.05

 3.00 Prom +  64233  64272   40                              -3.25
 3.01 Init +  92502  92582   81  2  0   69  115    38 0.478   5.62
 3.02 Intr +  95362  95413   52  0  1   83  105    37 0.325   2.46
 3.03 Term +  96776  96867   92  0  2   54   42    64 0.240  -4.70
 3.04 PlyA +  96997  97002    6                               1.05

 4.04 PlyA -  98048  98043    6                               1.05
 4.03 Term - 100969  99998  972  1  0  123   47   520 0.468  42.46
 4.02 Intr - 122348 121930  419  0  2   42   20   177 0.013  -0.88
 4.01 Init - 123617 123191  427  2  1   81   53   246 0.759  16.91
 4.00 Prom - 131329 131290   40                              -3.65

 5.02 PlyA - 132485 132480    6                               1.05
 5.01 Sngl - 136138 135545  594  1  0   69   41   375 0.355  26.84
 5.00 Prom - 137720 137681   40                              -3.45

 6.07 PlyA - 138092 138087    6                               1.05
 6.06 Term - 149651 149241  411  2  0   94   41   212 0.611  11.36
 6.05 Intr - 149793 149706   88  2  1   19   95    53 0.892  -1.85
 6.04 Intr - 152102 151991  112  0  1  100   90    58 0.884   5.72
 6.03 Intr - 153380 153265  116  1  2   45   67    75 0.619   0.27
 6.02 Intr - 156886 156715  172  2  1  105    7   111 0.124   2.78
 6.01 Init - 163407 163275  133  0  1   92   40   109 0.736   6.85
 6.00 Prom - 164028 163989   40                              -3.95

 7.00 Prom + 171305 171344   40                              -4.55
 7.01 Init + 176824 177011  188  0  2   70   16    81 0.288  -2.32
 7.02 Intr + 177773 177896  124  2  1   78   92   108 0.341   9.87
 7.03 Term + 180210 180269   60  2  0   97   46    64 0.377  -0.07
 7.04 PlyA + 180634 180639    6                               1.05

 8.03 PlyA - 180961 180956    6                               1.05
 8.02 Term - 192934 192780  155  2  2   93   40   108 0.675   3.60
 8.01 Init - 200711 200669   43  2  1   67   71    59 0.512   2.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_1|738_aa
MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASP
REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL
VEGLQKQPRRPRRWASSPKISSRDNQELPPDSMVTGSWNYSQVTVHVHGQEVLSEETVHL
GVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPHQEEELQTLQESEVPVPEDP
DLPAERSSGDSEMVALLTALSQVCPSYLCTTENLFEEPLGISHTKQGQNTRLPVASRFDE
ILMWFQGLVTFKDVAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFPIPRPDEIS
QVREEEPWVPDIQEPQETQEPEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEI
HQTPDWEIVFEDNPGRLNERRFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTC
NSHLVRHLRTHTGEKPYKCMECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPV
TQAERTPSVEKPYRCDDCGKHFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQ
RIHLGGKPYLCGECGEDFSEHRRYLAHRKTHAAEELYLCSECGRCFTHSAAFAKHLRGHA
SVRPCRCNECGKSFSRRDHLLYISPRQVQGTTNEKISGRGLQQLLGAWVHLRNLGNRSTE
KQFHGKRAVGQLNNPSKQ

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_1|2217_bp
atggctacagccgtggaaccagaggaccaggatctttgggaagaagagggaattctgatg
gtgaaactggaagatgatttcacctgtcggccagagtctgtcttacagagggatgacccg
gtgctggaaacctcccaccagaacttccgacgcttccgctaccaggaggcagcaagccct
agagaagctctcatcagactccgagaactttgtcaccagtggctgagaccagagaggcgg
acaaaggagcagatcctagagctgcttgtgctggaacaatttcttaccgtcctacctgga
gaactacagagctgggtgcggggccaacggccagaaagtggcgaggaggcagtgacgctg
gtggagggtttgcagaaacaacccaggagaccaaggcggtgggcatcttctcctaaaata
agctcccgtgacaaccaagaacttcctcctgactccatggtgactggaagttggaattat
tcccaggtgactgtccatgttcacggccaggaagtcctgtcagaggagacggtgcattta
ggagtggagcctgagtcacctaatgagctgcaggatcctgtgcaaagctcgacccccgag
cagtctcctgaggaaaccacacagagcccagatctgggggcaccggcagagcagcgtcca
caccaggaagaggagctccagaccctgcaggagagcgaggtcccagtgcccgaggaccca
gaccttcctgcagagaggagctctggagactcagagatggttgctcttcttactgctctg
tcacaggtgtgccctagttacctctgtaccacagagaatttgtttgaagaaccactgggc
ataagccatactaaacagggacaaaatacgaggctacccgtagcatcacgttttgatgaa
atccttatgtggtttcagggactggtaacgttcaaggatgtggccgtatgcttttcccag
gaccagtggagtgatctggacccaacacagaaagagttctatggagaatatgtcttggaa
gaagactgtggaattgttgtctctctgtcatttccaatccccagacctgatgagatctcc
caggttagagaggaagagccttgggtcccagatatccaagagcctcaggagactcaagag
ccagaaatcctgagttttacctacacaggagataggagtaaagatgaggaagagtgtctg
gagcaggaagatctgagtttggaggatatacacaggcctgttttgggagaaccagaaatt
caccagactccagattgggaaatagtctttgaggacaatccaggtagacttaatgaaaga
agatttggtactaatatttctcaagtgaatagttttgtgaaccttcgggaaactacaccc
gtccaccccctgttagggaggcatcatgactgttctgtgtgtggaaagagcttcacttgt
aactcccaccttgttagacacctgaggactcacacaggagagaaaccctataaatgtatg
gaatgtggaaaaagttacacacgaagctcacatcttgccaggcaccaaaaggttcacaag
atgaacgcgccttacaaatatcccctaaaccggaagaatttggaagagacctcccctgtg
acacaggctgagagaactccatcagtggagaaaccctatagatgtgatgattgcggaaag
cacttccgctggacttcagaccttgtcagacatcagaggacacatactggagaaaaaccc
ttcttttgtactatttgtggcaaaagcttcagccagaaatctgtgttaacaacacaccaa
agaatccacctgggaggcaaaccctacttgtgtggagagtgtggtgaggacttcagtgaa
cacaggcggtacctggcgcaccggaagacgcacgctgctgaggaactctacctctgcagc
gagtgcgggcgctgcttcacccacagcgcagcgttcgccaagcacttgagaggacacgcc
tcagtgaggccctgccgatgcaacgaatgtgggaagagcttcagtcgcagggaccacctc
ttgtacatctctcctagacaagtccaaggaactactaacgagaagatttcaggaagaggc
ctacagcaattgcttggtgcttgggttcatttgcggaatcttggcaacaggtctacagag
aagcagttccacggcaaaagagctgtggggcagttgaataatccatccaaacaatga

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_2|123_aa
MEDEDTDQEFQNAGVYAGGFQTGPNITVEMTDNIIATEWQLDEQHRLTKDNGEAHHPGAQ
GQLQAEFAGHDGGVVKGIADGEVAVKRHDSEDQELGGAHEEVEEGLQQAAGHADYCSCHY
KGS

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_2|372_bp
atggaggatgaggacactgaccaggagttccaaaatgctggtgtctatgcaggcggcttt
caaactgggcccaacatcacagtagaaatgactgataacattattgccacagaatggcaa
ctggatgagcagcatcgtctgacaaaagacaatggtgaagcccaccacccaggagctcag
ggccagctgcaggcagagtttgctggtcatgatggtggggtggtgaaggggattgcagat
ggtgaggtagcggtcaaaagacatgatagtgaggatcaagaactcggtggtgcccacgaa
gaagtggaagaaggcctgcagcaggcagcaggacatgcagattactgttcttgccactac
aaaggttcctag

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_3|74_aa
MRKFLKGTKQGHSGSSCFRPALPDGLQLCNTVNLLIASPLIGKGDWCGQEEIRSHLLPVI
LCAKERRMNENYLL

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_3|225_bp
atgaggaaatttttgaagggcaccaagcaaggacattcaggcagctcatgcttcaggcct
gcactccctgatggcttacagttgtgcaacacagtgaacttgctaattgcttctcctctg
attggaaaaggagattggtgtggccaagaagaaattcggtcacatctcctacctgttatc
ctgtgcgcaaaggaaagaagaatgaatgaaaactatcttttatag

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_4|605_aa
MARELRDACTSFNSRCNQVEEKVSVIEHQINEIKQEDKVREKRVKRNEQSLQEIWDCVKR
PNLCLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSRREIPR
HITVRFTKVEIKEKMLRAAREKDRSMRQKVNKDIQDLNSALHQADLIDIYRTLHPKSSEY
TFFSAPHCTYSKIGHIIGSEALLSKCKRTEITTNRLSDHSAIILELRTKKLTQNRTTTWK
LNNLLLNDYWVNNEMKAGIKIFFETNENKDTTYQNLWDTFKAGNPAHHIVVVMGNWSTVT
EITLIAFPALLEIRISLFVVLVVTYTLTATGNITIISLIWIDHRLQTPMYFFLSNLSFLD
ILYTTVITPKLLACLLGEEKTISFAGCMIQTYFYFFLGTVEFILLAVMSFDRYMAICDPL
HYTVIMNSRACLLLVLGCWVGAFLSVLFPTIVVTRLPYCRKEINHFFCDIAPLLQVACIN
THLIEKINFLLSALVILSSLAFTTGSYVYIISTILRIPSTQGRQKAFSTCASHITVVSIA
HGSNIFVYVRPNQNSSLDYDKVAAVLITVVTPLLNPFIYSLRNEKVQEVLRETVNRIMTL
IQRKT

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_4|1818_bp
atggcacgagaacttcgtgacgcatgcacaagcttcaatagccgatgcaatcaagtggaa
gaaaaggtatcagtgattgaacatcaaattaatgaaataaagcaagaagataaagttaga
gaaaaaagagtaaaaagaaatgaacaaagcctccaagaaatatgggactgtgtgaaaaga
ccaaatctatgtttgattggtgtacctgaaagtgatggggagaatggaaccaagttggaa
aacactcttcaggatattatccaggagaacttccccaacctagcaaggcaggccaacatt
caaattcaggaaatacagagaacaccacaaagatactcctcgagaagagaaatcccaaga
cacataactgtcagattcaccaaggttgaaatcaaggaaaaaatgttaagggcagccaga
gagaaagacagatcgatgagacagaaggttaataaggatatccaggacttgaactcagct
ctgcaccaagcagacctaatagacatctatagaactctccaccccaaatcatcagaatat
acattcttctcagcaccacattgcacctattctaaaattggccacataattggaagtgaa
gcactcctcagcaaatgtaaaagaacagaaatcacaacaaaccgtctctcagaccacagt
gcaatcatattagaactcaggactaagaaactcactcaaaaccgcacaactacatggaaa
ctgaacaacctgctcctgaatgactactgggtgaataatgaaatgaaggcaggaataaag
attttctttgaaaccaatgaaaacaaagacacaacataccagaatctctgggacacattt
aaagcaggaaaccctgcccaccatatagtagttgtcatgggaaactggagcactgtgact
gaaatcaccctaattgccttcccagctctcctggagattcgaatatctctcttcgtggtt
cttgtggtaacttacacattaacagcaacaggaaacatcaccatcatctccctgatatgg
attgatcatcgcctgcaaactccaatgtacttcttcctcagtaatttgtcctttctggat
atcttatacaccactgtcattaccccaaagttgttggcctgcctcctaggagaagagaaa
accatatcttttgctggttgcatgatccaaacatatttctacttctttctggggacggtg
gagtttatcctcttggcggtgatgtcctttgaccgctacatggctatctgcgacccactg
cactacacggtcatcatgaacagcagggcctgccttctgctggttctgggatgctgggtg
ggagccttcctgtctgtgttgtttccaaccattgtagtgacaaggctaccttactgtagg
aaagaaattaatcatttcttctgtgacattgcccctcttcttcaggtggcctgtataaat
actcacctcattgagaagataaactttctcctctctgcccttgtcatcctgagctccctg
gcattcactactgggtcctacgtgtacataatttctaccatcctgcgtatcccctccacc
cagggccgtcagaaagctttttctacctgtgcttctcacatcactgttgtctccattgcc
cacgggagcaacatctttgtgtatgtgagacccaatcagaactcctcactggattatgac
aaggtggccgctgtcctcatcacagtggtgacccctctcctgaacccttttatctacagc
ttgaggaatgagaaggtacaggaagtgttgagagagacagtgaacagaatcatgaccttg
atacaaaggaaaacttga

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_5|197_aa
MSFDCYVAICDPLHYTIIMNSRACLLLVLGCWVGAFLSVLCPTIVVSRLPFCYKEISHFF
CDITPLLHVSCIDTHFIEMINFLLSSLILLTSLVLTTVSYIYIISTILHIPSAQGRRKAF
STCASHITVISIAYISNIFRYVRPSQSHSMGFDKVTAVPTMVTPLLNPFTYSLRNEKVKA
VLKEAVSKIMSSWHRRT

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_5|594_bp
atgtcctttgactgctacgtggccatctgtgaccccctgcactacaccattatcatgaac
agcagggcctgcctcctactagttctgggctgctgggttggagccttcctgtctgtgttg
tgcccaaccattgtggtgtccagattgcctttctgttacaaggaaattagtcacttcttc
tgtgacatcacccctctgctacatgtgtcctgtatagacactcatttcatcgagatgata
aacttcctcttatcttccctcatcctcctgacctcactggtgctcaccactgtgtcctac
atctacatcatttctaccatcctgcacatcccctcagcccaaggacgtcggaaggccttt
tccacgtgcgcttcccacatcaccgtcatttccatcgcttatataagcaacatcttcagg
tatgtgaggcccagccagagtcattcaatgggttttgacaaggtgacagctgtccccaca
atggtgacccctcttctgaatcccttcacttatagtctaagaaatgaaaaggtaaaggca
gtcttgaaagaagcagtcagcaaaattatgtcctcatggcacaggagaacttaa

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_6|343_aa
MDAELRIALTVETKSVPFLINTEATHSTLPSFQESVSLASITVVGTVAFIPLAVTSFKHC
MATCDPLCSTIIAKSRACLLLALGCWMGTFLAVLRLTIVVSRPVSQPVCTAVVWIGGEVM
FKCKEEVAFTWIQQKAYRPIGPRGSEARIQCAQQLGELPEIPVSLTSLKALRGLRMIGAE
DPPSKEKWVGVPVKEVVWLKKQSVHHLAGMAESTEPQIWWSSLLPGTPCQGEIGVLSVEQ
RTHAVRRTMSGPRLKKQSGPDLARPLCCTVGAPIHLDCMRSPQPASWNGCFPLNHKDGGR
PSLQEQGLVSSRLNPLPLAGQILTQWVLTHEVLWKWGLQNDAA

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_6|1032_bp
atggatgccgagcttcgaatagctctcacagtggaaactaagtccgtccccttcttaatc
aatacggaggctacccactccacattaccttcttttcaagagtctgtttcccttgcctcc
ataactgttgtagggacagtggcgtttatccccttggcagtgacatccttcaaacactgc
atggcaacctgtgaccccctgtgcagcaccatcattgcaaaaagcagggcctgcctcctg
ctggctctgggatgctggatgggaaccttcctggctgtgttgcgcctgactattgtggtg
tccagacccgtatcccaaccagtttgtacagcggtggtctggattggaggtgaagttatg
ttcaagtgcaaagaggaagttgctttcacttggatacaacaaaaggcctataggcctata
ggaccaagagggagtgaagctcgcatccaatgtgcccagcagttaggggagcttcctgag
atacctgtttctctcacttccctcaaagcattgagaggacttagaatgataggagctgag
gacccacccagtaaggagaagtgggtcggggtcccggttaaagaagtagtctggctaaag
aagcagtctgtccaccatctggctgggatggctgagtctacagaaccacagatatggtgg
tcatccctcctaccaggaactccctgccagggagagatcggagttctgtctgtggaacaa
aggacccacgcagtaaggaggactatgtcagggcccaggttaaagaagcagtctggcccc
gatctggcaaggccattgtgctgcaccgtgggggcccctattcatctggactgtatgcgt
tctccacagccagcaagctggaatggctgtttccctctgaaccataaagatggtggccgt
ccttcccttcaggaacaaggtcttgtctccagccgacttaaccctctgcccttggctggc
cagattctaacccagtgggtcttaacccatgaggtactatggaagtggggcctacagaac
gatgctgcttga

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_7|123_aa
MFLGIYPKKLKAYVHTKTCTQVFITVLFITAQTWKQPRYPSVGEIDKPTVVQSYDGILLS
PTKEFTVCARTMLRGIAVHSGNEISSIEFSDSLHSLSDLWMFRQGQPAVRTANCHGIIYW
FDP

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_7|372_bp
atgttccttggtatttacccaaaaaagttgaaagcttatgttcacacaaaaacctgcaca
caggtgtttataacagttttattcataactgcccaaacttggaaacaaccaagatatcct
tcagtaggtgaaatagataaaccaactgtggtacagtcttacgatggaatattacttagc
cccacaaaggaattcacagtgtgtgcacggacaatgctacgaggcattgcagtgcattct
ggtaatgaaatatcttcgatagaattctcagattccttacattcgttgtcagatttatgg
atgttcaggcagggccagcctgctgtcaggactgccaactgccatggaatcatctattgg
tttgacccttga

>gi568815587r:123705411_123906349|GENSCAN_predicted_peptide_8|65_aa
MPATGVKEFSKTVVEGCQEQLFQLRKAGDSTALETRFLAMNQTTKASYSEDCQHMASQLQ
AKEYF

>gi568815587r:123705411_123906349|GENSCAN_predicted_CDS_8|198_bp
atgccagccactggagtaaaagaatttagcaagacagttgtagaaggatgtcaggaacag
ctgtttcagctacgcaaagcaggagatagtactgccttggaaacacgtttcttggccatg
aatcagactaccaaggcctcatatagtgaggactgccagcatatggcctctcaactccaa
gccaaagaatatttctag