GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:44:08

Sequence gi568815590f:127315867_127516943 : 201077 bp : 40.80% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   3405   4313  909  2  0   86   39   191 0.762  10.01
 1.02 PlyA +   4324   4329    6                              -1.95

 2.00 Prom +   4521   4560   40                              -3.65
 2.01 Init +   5183   5263   81  1  0   59   76    44 0.838   1.32
 2.02 Term +   5541   5792  252  2  0   35   41   227 0.864   7.35
 2.03 PlyA +   8362   8367    6                               1.05

 3.00 Prom +  15626  15665   40                              -5.15
 3.01 Init +  18812  18954  143  1  2   81  106    43 0.414   5.05
 3.02 Intr +  23415  23569  155  0  2   90   99    28 0.108   2.89
 3.03 Intr +  32948  33072  125  0  2   98    7    99 0.050   2.18
 3.04 Term +  37978  38124  147  0  0  -30   55   243 0.173   6.12
 3.05 PlyA +  38618  38623    6                               1.05

 4.00 Prom +  54795  54834   40                              -4.35
 4.01 Init +  63993  65596 1604  2  2   42   53   426 0.824  26.40
 4.02 Intr +  66945  67016   72  0  0   72   49    86 0.565   0.70
 4.03 Term +  75221  75440  220  2  1   60   36   271 0.997  14.63
 4.04 PlyA +  76356  76361    6                               1.05

 5.06 PlyA -  76438  76433    6                               1.05
 5.05 Term -  76863  76800   64  2  1  105   53    60 0.011   0.58
 5.04 Intr -  85496  85395  102  1  0   97   37    89 0.042   3.07
 5.03 Intr -  86246  86131  116  2  2   82   66    73 0.304   2.83
 5.02 Intr -  90818  90750   69  2  0   99   84    30 0.343   2.16
 5.01 Init -  93204  92797  408  0  0   32  103   157 0.135   8.44
 5.00 Prom -  93915  93876   40                              -4.85

 6.00 Prom +  99484  99523   40                              -6.85
 6.01 Sngl + 100217 101080  864  1  0   88   51   925 0.664  84.42
 6.02 PlyA + 101306 101311    6                               1.05

 7.00 Prom + 105636 105675   40                              -5.05
 7.01 Init + 106940 107078  139  1  1   65    5   161 0.494   5.85
 7.02 Intr + 111267 111419  153  1  0   72   55   101 0.691   4.32
 7.03 Term + 111971 112146  176  0  2   70   49   122 0.660   3.44
 7.04 PlyA + 112719 112724    6                               1.05

 8.11 PlyA - 112845 112840    6                               1.05
 8.10 Term - 116656 116494  163  0  1  -71   48   230 0.346  -0.47
 8.09 Intr - 116851 116675  177  0  0   70   92    88 0.645   5.51
 8.08 Intr - 118363 118245  119  1  2   24  109   109 0.697   4.94
 8.07 Intr - 132630 132566   65  1  2   92   85     1 0.006  -2.28
 8.06 Intr - 134959 134825  135  2  0   29   81    95 0.001   2.52
 8.05 Intr - 137931 137800  132  1  0   33   61    87 0.001   0.20
 8.04 Intr - 147853 147738  116  0  2  103   67    48 0.049   3.37
 8.03 Intr - 163304 163217   88  0  1  138   86    63 0.634   9.21
 8.02 Intr - 163940 163838  103  2  1   65   78    66 0.451   2.13
 8.01 Init - 166936 166853   84  1  0   76   81    83 0.940   7.27
 8.00 Prom - 179717 179678   40                              -5.65

 9.04 PlyA - 180000 179995    6                               1.05
 9.03 Term - 180353 180106  248  0  2   46   48   196 0.285   6.37
 9.02 Intr - 186275 186124  152  1  2  102   18   109 0.176   4.19
 9.01 Init - 187766 187699   68  2  2   45   87    93 0.587   5.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 140256 140399  144  2  0  111   43    91 0.953   3.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_1|302_aa
MAILPKVIYRFNAIPIKLPMIFLTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWCWYQNRDIDQWNRTEPSEITRHIYNYLIFDKPEKNKQWGKDSLFNK
WCWENWLTICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIKDIGVGKDF
MSKTPKAMATKDKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFTTYSSDKGLISRIY
NELKQIYKKKTNNSIKKWAKDMNRHFSKEDIYAAKKHEKMLIITGHQRNANQNHNEIPSH
TS

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_1|909_bp
atggccatactgcccaaggtaatttacagattcaatgccatccccataaagctaccaatg
attttcctcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtgctggtaccaaaacaga
gatatagatcaatggaacagaacagagccatcagaaataacgcggcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctaaccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattaaggacataggcgtgggcaaggacttc
atgtccaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaactccatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacatgaaaaaatg
cttatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctcac
accagttag

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_2|110_aa
MGVHTIHWLFSIDYKFHQVFTRMIGGRERAVSWRRHHYQGIQEHNAYLKLSLNPNNRKHS
APLLSQQQVLAMRGQEHVKKSSYSIREKKRPKPDSGANPEEHHLAHESPV

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_2|333_bp
atgggagttcacactattcactggctcttctcaatagactacaaatttcatcaggtgttc
acaagaatgattggaggcagggaaagggcagtatcatggagaaggcaccactatcagggt
attcaggaacacaatgcctatctgaaactgagcctcaatccaaacaacagaaaacactct
gctcctctcctcagtcagcagcaggttcttgctatgagaggacaagagcatgtgaaaaaa
tcatcttatagcatcagagaaaagaaaagacctaaacctgatagtggagcaaatcctgag
gaacatcatcttgcacatgagtctccagtctaa

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_3|189_aa
MVSNLESYTLSPMCEEITKTFLDTQVSQNCCLSDSLTQKAVGNHIPSKGAYLANSTLNLS
AWKLLMQCPRWRKVRVDPEEPREDVQHGDLGSSQGPYFSVFLVSGLPSVVLRPTAAAAPR
ELLERQSPGPHPRPSESETLWKASRMCQRKALELSFLLEKERRRKKKEEEEQEEEEQEEQ
DKEEEVFFP

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_3|570_bp
atggtttccaacctagaatcctatacccttagtccaatgtgtgaggagataacaaagaca
tttttagacactcaagtttcccaaaactgttgtctatcagacagccttactcagaaagct
gttgggaatcatataccatcaaaaggtgcttatttagcaaattcaaccttaaacctgagt
gcatggaaactattgatgcagtgtccaaggtggagaaaggtcagagtggatccagaggag
ccaagagaagacgtccagcatggtgacctgggctcaagtcaaggtccttatttctctgtc
ttcttggtcagtggtcttccaagtgttgtcctcaggcccacagcagcagcagcacccagg
gagttgttagaaaggcaaagtcctggtccccaccccagacccagtgaatcagaaactctg
tggaaagcatctagaatgtgtcagcgaaaggcactggaattatcattccttcttgagaag
gaaagaagaagaaagaagaaggaggaggaggagcaggaggaagaggagcaggaggagcag
gacaaggaggaggaagtcttcttcccttga

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_4|631_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKVNYKPLLKEIKEDTNKWKNIPCSWVGRINSVKMAILPKVIYRFNAIPIKLPM
TFFTELEKTTLKFIWNQKRACIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNR
DIDQWNRTEPSEITPHTYNCLIFDKPEKNKKWGKDSLFNKWCWENWLAICRKLKLDPFLT
PYTKINSRWIKDLNVRPKTIKTLEENLGITTQDIGMGKDFMSKTPKAMATKDKIDKWDLI
KLKSFCTAKETTIRVNRQPTKWEKIFTTYSSDKGLISRIYNELKQIYKKKTNNPIKKWAK
DMNRHFSKEDIYAAKEHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRFYIQL
CHEEAAFLQKLRNCFSCSPVHGSVSGERDRIRQCTEPYDDIFSQEEEECFIKSPISPRLD
CTKILQYEHNVLYCPGSNPFPSGNTFANNDS

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_4|1896_bp
atgattatctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgcta
aaaactctcaataaattaggtattgatgggacgtatttcaaaataataagagctatctat
gacaaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaacaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggtgaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatagcgtgaaa
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
tgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactttactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacaccgcatacctacaactgt
ctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccactcaggacataggcatgggcaaggacttc
atgtccaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaagacatttatgcagccaaagaacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcaatcattaaaaagtcaggaaacaacaggttctatattcagctc
tgccatgaagaagctgcgttcctacagaaactgagaaactgcttctcctgcagccctgtg
catgggagtgtgtcaggggaaagggaccggatacggcagtgtaccgagccctacgatgac
attttcagccaagaagaagaagaatgcttcatcaaatctcccatcagcccaagactagat
tgtaccaagattttgcaatatgaacataatgttctctactgtccaggatctaatcctttt
ccatcggggaacacatttgcaaacaatgactcctaa

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_5|252_aa
MEATGWQTPRGPHLLPLGALALRRIPVRVVKAVGEGATDESSRAPQCHCDKSACRGTAAL
AIALHIKKARRPGMVHHRDRMHHVPMMSSKLHLPLQSASNVPYKKLLEKQKKRKFTDTIH
SLCPPSFSLSELSSLQETDLYGLNQQVLMSLMSTWVQTRSRTGEAEHLQDILGMTFKKLQ
LSQLSQEPGKHLEHTLFMPKHITWAVEKREQLWDKEHIVKLQSCTVIAWSTSAQYSACKQ
QKSNTDSHNCIH

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_5|759_bp
atggaagcaactggctggcagacaccacgggggcctcaccttttgcctttaggtgccctg
gctctgcgaagaattccagtcagagttgtgaaggctgtgggtgagggagccactgatgag
tccagcagagccccacagtgccactgtgacaagtctgcgtgcagggggacagcagcactg
gccattgccctgcatattaagaaggcccgcaggccaggcatggtgcatcatagggacagg
atgcaccatgtccctatgatgtccagtaagttacatcttccactgcagtcagcctcaaac
gtgccctataagaaactgctggaaaagcaaaagaaaagaaaattcacagatactatccat
tccctctgtccaccctccttttctctctctgaattgtcctcactgcaggagactgacctg
tatggactaaatcaacaggttctcatgtctctgatgtctacctgggttcagacaaggagt
agaacaggggaagctgaacacctgcaggatatcttgggaatgacattcaaaaagctacag
ctgtcccagctgagccaggagcctggcaagcacttggagcacacattatttatgcccaaa
catattacctgggcagttgagaaacgagaacagttgtgggacaaagaacacattgttaaa
ttgcagagttgcacagttattgcctggagcaccagtgcccagtacagtgcctgcaagcaa
cagaaatctaatacagattcccacaactgcatacattga

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_6|287_aa
MAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGAVKLEKEKLEQN
PEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQKTICRFEALQL
SFKNMCKLRPLLQKWVEEADNNENLQEICKAETLMQARKRKRTSIENRVRGNLENLFLQC
PKPTLQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFP
PAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_6|864_bp
atggcgtactgtgggcctcaggttggagtggggctagtgccccaaggcggcttggagacc
tctcagcctgagagcgaagcaggagtcggggtggagagcaactccaatggggcctccccg
gaaccctgcaccgtcccccctggtgccgtgaagctggagaaggagaagctagagcaaaac
ccggagaagtcccaggacatcaaagctctgcagaaagaactcgagcaatttgccaagctc
ctgaagcagaagaggatcaccctgggatatacacaggccgatgtggggctcatcctgggg
gttctatttgggaaggtgttcagccaaaagaccatctgccgctttgaggctctgcagctt
agcttcaagaacatgtgtaagctgcggcccttgctgcagaagtgggtggaggaagctgac
aacaatgaaaatcttcaggagatatgcaaagcagaaaccctcatgcaggcccgaaagaga
aagcgaaccagtatcgagaaccgagtgagaggcaacctggagaatttgttcctgcagtgc
ccgaaacccacactgcagatcagccacatcgcccagcagcttgggctcgagaaggatgtg
gtccgagtgtggttctgtaaccggcgccagaagggcaagcgatcaagcagcgactatgca
caacgagaggattttgaggctgctgggtctcctttctcagggggaccagtgtcctttcct
ccggccccagggccccattttggtaccccaggctatgggagccctcacttcactgcactg
tactcctcagtccctttccctgagggggaagtctttcccccagtctccgtcatcactctg
ggctctcccatgcattcaaactga

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_7|155_aa
MTRTTRVDLEVVKVVRLRMHLKMELSGPADGYGMAVKESEESGCLPETSRQLYMSSVGLW
AWTRHSGVVKVNVPGVIQTELDSQVFTFQLRDIGRLSTFPSSVNDNSTLGVFQLKNLTVS
LDSFLHTHAMPTVDAASSVDIWEGGFQVENSKVKG

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_7|468_bp
atgactcggaccacaagggtagacttggaggtggtgaaagtggtcagattaaggatgcac
ttgaaaatggagttgtcaggacctgctgatggctatggcatggctgtgaaggaaagtgaa
gaatcaggatgcctcccagaaacctcaaggcagttgtatatgtcgtcagtaggtctatgg
gcctggacaaggcattctggtgtagtgaaagtcaacgtccctggagtcattcaaactgag
ttggactctcaagtcttcactttccagctcagggatattggccgcttatccaccttccca
agctcagtaaatgataattccactctaggagttttccagctcaaaaacctcactgtcagc
cttgactccttccttcacacccatgccatgccaactgtagatgcagccagctctgtggat
atctgggaaggaggcttccaggtggagaatagcaaggtcaaaggctga

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_8|393_aa
MTGNPSQLPLTTLVGPSATSKDSLDKEMYTPECPACSECSKSVGGSDRIPSPLNTTSVAV
DNGTEAGEKSVQQLLSLKSLQPLEEGLEVKKRWLDNLLENILAEGLVHLKTWIALNALFW
DILMVNLQDEAFTGDFKHLKEQASWRLVAIFFYIHVIILRAQHESPGRYHFSHLTTKPFN
IWYTFGPQIISSNSKVTMAMLLLSAWTQEWALPFKTSTKGKSPQLRALNSITSAKSLSWC
KGASEAIRQCQSSAAKPRRSGKESVREPWTSVLGALGVAARKAGLAAKGEGEGVEGYLPL
PQKSREGVGVLAPSPEKRDLPLRVKDQGRRPCVWSDTLETGVPARIKHQGKAAFPVRDRS
RSFGSTDKTCLLCRYQKMKGIEIKGDIEVWHQD

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_8|1182_bp
atgactggcaacccctcacaactgcctctgacaactcttgtgggtccttctgccacatct
aaggactctctggataaggagatgtatacaccagaatgccccgcatgcagcgaatgctca
aaaagtgttggtggaagtgacagaattccatcaccattaaacacaaccagtgttgcggtt
gacaatggcactgaagcaggtgaaaaatccgtacagcagcttctgtctttgaagagtttg
cagcctcttgaagagggtttagaggttaaaaaaaggtggcttgataatctactagagaat
attttggctgaaggtttagttcacctaaagacttggatagctcttaatgcactattttgg
gatattttgatggtaaatcttcaggatgaagctttcactggggacttcaagcatcttaag
gagcaggcaagctggcgacttgtggcaatcttcttttacatccatgtcataattcttagg
gcccagcatgaaagtccagggcggtatcatttctcacatctgactacaaagcctttcaac
atctggtacacatttgggccacagattatctcatccaattcaaaagtcaccatggcaatg
cttctgctcagtgcttggacacaggaatgggccttgccttttaaaacctcaaccaaagga
aaatctccccaactcagggcacttaattcaatcacatctgcaaagtcactttcatggtgt
aagggggcttccgaggcaatcaggcagtgtcagtcttcagctgctaagccgagaagatct
gggaaggagtcagtcagagagccttggaccagcgttctaggggctctgggagtggctgcc
aggaaagcaggacttgccgctaagggtgaaggagaaggggttgaggggtacttgcccctg
ccccagaaaagcagagaaggggttggggtacttgccccttccccagaaaagcgggacttg
ccgctaagggtgaaggaccaaggcaggcgtccctgcgtgtggtctgacacccttgaaaca
ggcgtccctgcaaggattaaacaccaagggaaggctgccttcccagtccgtgaccggagc
cggagttttgggtccacggataaaacgtgtctcctttgtcgctaccagaaaatgaaagga
attgaaattaagggagacattgaagtgtggcaccaagattga

>gi568815590f:127315867_127516943|GENSCAN_predicted_peptide_9|155_aa
MDPGEPICGQELKAYQEQTKRRLKCVGDFRNMLIYKSQLIEKAGYGDTDKVTAQGASRSV
HPFRFQLHLNNHGLGKINLPMEDDENLCFAEVLTNVSLTLIVSCADWLKLMFENKDGDRM
MFPRGNQDLIKRNGRIPAVQATTDVCYTVSGRYWL

>gi568815590f:127315867_127516943|GENSCAN_predicted_CDS_9|468_bp
atggaccctggagagcctatttgtggtcaagagctgaaagcttatcaagaacaaactaaa
agaagattgaaatgtgttggagatttcagaaacatgcttatttataagtcgcaactaatt
gagaaggctggctatggagacacagacaaagtgaccgcacaaggagcttctaggtctgtt
catccctttagattccagcttcacttgaataaccatggcttggggaagataaatttgccc
atggaagatgacgagaacttgtgtttcgcagaagttctcacaaatgtctcactgacactg
attgtttcatgtgctgattggctaaagctcatgtttgagaataaggatggggacaggatg
atgttcccacgtggaaatcaggatctcattaagagaaatggaagaattcctgctgtgcag
gcaaccacagatgtctgctatacggtgtctggaagatactggttgtga