GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:23:12

Sequence gi568815586f:121526743_121741640 : 214898 bp : 49.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -   3608   3603    6                               1.05
 1.11 Term -   4318   4143  176  2  2   91   52    76 0.983   2.22
 1.10 Intr -   6217   6064  154  1  1   98   94   198 0.999  21.05
 1.09 Intr -   7848   7755   94  2  1  121  113    71 0.993  12.87
 1.08 Intr -  22241  22135  107  2  2   69   69   178 0.112  13.01
 1.07 Intr -  22896  22718  179  1  2   64   66   343 0.969  29.34
 1.06 Intr -  23135  23078   58  2  1   79   98    47 0.723   3.26
 1.05 Intr -  34482  34355  128  1  2   12   23   115 0.010  -2.20
 1.04 Intr -  47851  47805   47  0  2  114  106    29 0.790   5.35
 1.03 Intr -  49117  49039   79  2  1   32   97    62 0.760   0.11
 1.02 Intr -  52204  52060  145  1  1   84  100   438 0.982  44.46
 1.01 Init -  52677  52510  168  0  0   61   -4   198 0.680   5.44
 1.00 Prom -  63092  63053   40                              -5.76

 2.00 Prom +  63724  63763   40                              -3.06
 2.01 Init +  66684  66805  122  2  2   39  109   101 0.661   6.99
 2.02 Term +  89496  89664  169  0  1   85   48   111 0.206   4.15
 2.03 PlyA +  90115  90120    6                               1.05

 3.00 Prom +  98878  98917   40                              -4.56
 3.01 Init +  99456  99682  227  2  2   69   48   162 0.439   6.54
 3.02 Intr +  99796  99905  110  1  2   10   76   117 0.666   2.63
 3.03 Intr +  99926 100308  383  0  2    5   89   463 0.970  32.73
 3.04 Term + 114299 114901  603  1  0  133   47  1222 0.988 117.12
 3.05 PlyA + 116348 116353    6                               1.05

 4.06 PlyA - 117376 117371    6                               1.05
 4.05 Term - 124902 124804   99  0  0  128   46    65 0.674   4.43
 4.04 Intr - 126517 126333  185  2  2  112   64   292 0.997  28.71
 4.03 Intr - 127691 127532  160  2  1   59   61   310 0.999  24.96
 4.02 Intr - 132606 132449  158  1  2   66   97   100 0.311   8.43
 4.01 Init - 142741 142597  145  1  1  103  113   159 0.963  20.18
 4.00 Prom - 161955 161916   40                              -3.66

 5.00 Prom + 167524 167563   40                              -5.16
 5.01 Init + 177554 177557    4  1  1   89   92     0 0.306   0.66
 5.02 Intr + 186038 186222  185  0  2   48   91   209 0.884  16.71
 5.03 Term + 193486 193536   51  0  0   66   41    72 0.062  -2.27
 5.04 PlyA + 195818 195823    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  22241  22131  111  2  0   69   47   184 0.873  10.96
S.002 Term - 160569 160376  194  1  2   48   45   156 0.860   4.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:121526743_121741640|GENSCAN_predicted_peptide_1|444_aa
MPPAPGSGFPALPPRPLGLLLPPSRAPQRLLLGPTFAPPARVRSPLRGLHNQAPGRRPID
RQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPL
IFREKDGLGIKMPDPDFTVRDVKLLVAFKMTFSSLVLAPSPRLSELTDGTFKAGATGPWT
NFRSWNLLDVAFEVIADWRGGHGGAGKQGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPE
AQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYP
KVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQS
DIFLGDRVERCQRIELKQGYTFFIPSGVAGLALDSKDDWKALGLAADSVTLAGLFLSLHL
SSLYNGGGVELNSGTLKFPPNPIL

>gi568815586f:121526743_121741640|GENSCAN_predicted_CDS_1|1335_bp
atgccgccggcccccggttccggcttcccggctctgccgccgcggccgctggggctgctg
ttaccgccgagccgggcgccgcagcggctcctcctggggcctacatttgccccgccagcc
cgtgtccggagcccccttcgcgggttacataaccaggctcccggccgacgcccgattgac
cgccagcgatacgacgagaacgaggacttgtcggacgtggaggagatcgtcagcgtccgc
ggcttcagcctggaggagaagcttcgcagccagctgtaccagggggacttcgtgcacgcc
atggagggcaaagatttcaactatgagtacgtacagagagaagctctcagggttcccctg
atatttcgagaaaaggatggactgggaattaagatgcctgaccctgatttcacagtccga
gacgtcaaactcctagtggccttcaagatgactttcagcagcctcgtcctggccccgagc
ccgaggctttcggagctgacggatggaaccttcaaagcaggggccacagggccatggact
aatttccgcagctggaacctgttggatgtagcttttgaggtcatcgcagactggcgtgga
ggccatggtggtgcagggaagcaagggagccggcggcttgtggacgtgatggatgtgaac
acccagaagggcacggagatgagcatgtcccagtttgtgcgttactacgagacgcccgag
gcccagcgggacaagctgtacaacgtcatcagcctagagttcagccacaccaagctggag
cacttggtcaagcgtccgactgtggtagacctggtggactgggtggacaacatgtggccc
cagcatctgaaggagaagcagacagaagccacgaacgccattgcagagatgaagtacccg
aaagtgaaaaagtactgtctgatgagcgtgaaaggttgtttcaccgacttccacatcgac
tttggaggcacttccgtttggtaccatgttttccggggtgggaagattttttggctgatt
cctccaacgctgcacaatttggcgctgtacgaggagtgggtgctgtcaggcaaacagagt
gacatctttctgggagaccgtgtggaacgatgccaaagaattgagctgaagcagggctac
acatttttcatcccttccggtgttgctggattggccctggattcaaaggatgactggaag
gctcttggccttgctgctgactctgtgacgttagctggtctcttcctctctctgcacctc
agctctctctacaatggtggtggggtggagctgaactctgggaccctcaagttccctccc
aaccccatcctctga

>gi568815586f:121526743_121741640|GENSCAN_predicted_peptide_2|96_aa
MAESVTIPLMRLRCSEMKTLALIPSLKRENSEMAPLQIESSVACFANRGCQTVQENDPAD
THQVKGYSDSPRHMCIDKIYPNILYSKFSFEKGELD

>gi568815586f:121526743_121741640|GENSCAN_predicted_CDS_2|291_bp
atggcagagagtgtgacgatccccctgatgcggctgagatgttctgaaatgaagacgttg
gctctcatccccagcctgaagagagaaaattctgagatggctcccttacagattgagagc
agtgtggcctgctttgctaatagaggatgtcagaccgtccaggaaaatgatcctgctgac
acccaccaagttaagggatatagtgattctccaaggcatatgtgtattgacaaaatttac
cccaacattctgtacagcaaattcagttttgaaaaaggagaactagactag

>gi568815586f:121526743_121741640|GENSCAN_predicted_peptide_3|440_aa
MGLRRRPEVTSGGPTQESKLQEQGHGSSCGEGRRQEPERAAGRFQEKWRAAARQGPWAVP
SERAGHVTPTTTPTSCLWSLPPGGFCQRRRGPACWGSGHFFDLVLLVLCGRPGGSRRLPP
AEVPRGARAGPRLGGVLHASGARPAPEPQQSRASPKRRQHHQRQPPEPPPQRGRGAPGGP
APPPPPSAVTYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKLKASSRTSALLSGFAM
VAMVEVQLDADHDYPPGLLIAFSACTTVLVAVHLFALMISTCILPNIEAVSNVHNLNSVK
ESPHERMHRHIELAWAFSTVIGTLLFLAEVVLLCWVKFLPLKKQPGQPRPTSKPPASGAA
ANVSTSGITPGQAAAIASTTIMVPFGLIFIVFAVHFYRSLVSHKTDRQFQELNELAEFAR
LQDQLDHRGDHPLTPGSHYA

>gi568815586f:121526743_121741640|GENSCAN_predicted_CDS_3|1323_bp
atgggcctcaggaggcgcccagaggtgacctcaggcggcccgacccaggagtccaagctc
caggagcagggccacgggagcagctgcggagaggggcggcgccaggagccggagcgggca
gccgggcgcttccaggaaaagtggcgggcggcggcgcgccagggaccgtgggcggtgccg
tcggagcgggcgggtcacgtgacgcccacaacaacgcccacttcttgtctctggtcactg
ccgcccgggggcttttgccagcggcgccgcgggcctgcgtgctggggcagcgggcacttc
ttcgacctcgtcctcctcgtcctgtgcggccggccggggggcagtcggcggctgcctccg
gcggaggtgcctcgcggcgcccgggccggcccgcgcctcggcggcgtgctccatgcatcc
ggagcccgccccgcccccgagccgcagcagtcccgagcttcccccaagcggcggcagcac
caccagcggcagccgccggagccgccgccgcagcggggacggggagcccccgggggcccc
gccccgccaccgccgccgtccgccgtcacctacccggactggatcggccagagttactcc
gaggtgatgagcctcaacgagcactccatgcaggcgctgtcctggcgcaagctctacttg
agccgcgccaagcttaaagcctccagccggacctcggctctgctctccggcttcgccatg
gtggcaatggtggaggtgcagctggacgctgaccacgactacccaccggggctgctcatc
gccttcagtgcctgcaccacagtgctggtggctgtgcacctgtttgcgctcatgatcagc
acctgcatcctgcccaacatcgaggcggtgagcaacgtgcacaatctcaactcggtcaag
gagtccccccatgagcgcatgcaccgccacatcgagctggcctgggccttctccaccgtc
atcggcacgctgctcttcctagctgaggtggtgctgctctgctgggtcaagttcttgccc
ctcaagaagcagccaggccagccaaggcccaccagcaagccccccgccagtggcgcagca
gccaacgtcagcaccagcggcatcaccccgggccaggcagctgccatcgcctcgaccacc
atcatggtgcccttcggcctgatctttatcgtcttcgccgtccacttctaccgctcactg
gttagccataagactgaccgacagttccaggagctcaacgagctggcggagtttgcccgc
ttacaggaccagctggaccacagaggggaccaccccctgacgcccggcagccactatgcc
tag

>gi568815586f:121526743_121741640|GENSCAN_predicted_peptide_4|248_aa
MPVSKCPKKSESLWKGWDRKAQRNGLRSQVYAVNGDYYVGEWKDNVKHGKGTQVWKKKGA
IYEGDWKFGKRDGYGTLSLPDQQTGKCRRVYSGWWKGDKKSGYGIQFFGPKEYYEGDWCG
SQRSGWGRMYYSNGDIYEGQWENDKPNGEGMLRLKNGNRYEGCWERGMKNGAGRFFHLDH
GQLFEGFWVDNMAKCGTMIDFGRDEAPEPTQFPIPERTQTLQEKFKPVSPDRSDQCGSGW
RSQQQLQA

>gi568815586f:121526743_121741640|GENSCAN_predicted_CDS_4|747_bp
atgccagtctctaagtgcccaaaaaagtcggagtccctgtggaaggggtgggaccggaag
gcccagaggaacggcctgcggagccaggtatacgctgtgaatggcgactactatgtgggc
gagtggaaggacaacgtgaaacacgggaaaggaacacaggtctggaagaagaaaggagcc
atctatgagggggactggaagtttgggaagcgagacggctacggcaccctcagccttcct
gaccaacagacaggaaagtgcaggagagtctactcaggctggtggaaaggtgataagaaa
tcgggttatgggatccagtttttcggacccaaggagtattatgagggtgactggtgtggc
agccagcgcagcgggtggggccgcatgtattacagcaacggcgacatctacgagggacag
tgggagaacgacaagcccaacggggagggcatgctgcgcctgaagaacgggaaccgctac
gagggctgctgggagagaggcatgaagaacggggcggggcgtttcttccatctggaccac
ggccagctgtttgaaggcttctgggtggacaatatggccaaatgcgggacgatgatcgac
tttggccgtgacgaggcccctgagcccactcagttccccattcctgagagaacacaaacg
cttcaggagaaattcaagcctgtgtcacccgatcgctcagaccagtgcggctctggctgg
aggagtcagcagcagctccaggcatga

>gi568815586f:121526743_121741640|GENSCAN_predicted_peptide_5|79_aa
MGTAGASEGGRRARGRGALGGRSGSAAGAAAGTAALHHRIMSGQLERCEREWHELEGEFQ
ELQTPTYRSRNIPFMDSDT

>gi568815586f:121526743_121741640|GENSCAN_predicted_CDS_5|240_bp
atgggaacagctggtgcctccgagggcggtcggcgagcgcgcgggcgtggggcgctgggg
ggccggtcgggcagcgctgcgggagcagccgccggcaccgccgccttgcaccatcgcatc
atgtccgggcagctggagcgttgcgagcgcgaatggcacgagctggagggagaatttcaa
gaactgcagacccccacttaccgctcccgtaacataccgttcatggattctgacacatga