GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:04:03

Sequence gi568815584r:63276012_63639685 : 363674 bp : 41.04% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2678   2717   40                              -3.65
 1.01 Init +   4795   5124  330  0  0   41   37   259 0.858  13.46
 1.02 Intr +   7110   7235  126  2  0   69   22   171 0.776   8.56
 1.03 Intr +   8446   8605  160  0  1   16   45   117 0.705  -1.16
 1.04 Intr +  10205  10380  176  0  2   31   92    88 0.160   2.24
 1.05 Term +  14867  15013  147  1  0   94   51   136 0.358   7.42
 1.06 PlyA +  17186  17191    6                               1.05

 2.07 PlyA -  18205  18200    6                               1.05
 2.06 Term -  20910  20888   23  1  2  105   43    16 0.098  -3.70
 2.05 Intr -  25939  25791  149  0  2   88   89    78 0.498   6.86
 2.04 Intr -  27938  27910   29  2  2   71   97    26 0.414  -2.20
 2.03 Intr -  33060  32946  115  2  1   84   86    99 0.603   8.83
 2.02 Intr -  37105  36933  173  1  2   43  -26   187 0.006   0.62
 2.01 Init -  41838  41635  204  0  0   84  105   284 0.970  26.60
 2.00 Prom -  62133  62094   40                              -5.35

 3.00 Prom +  62224  62263   40                              -6.95
 3.01 Init +  72411  72524  114  2  0   77   10   181 0.525   9.46
 3.02 Term +  90388  90456   69  0  0  119   41    81 0.546   3.46
 3.03 PlyA +  90878  90883    6                               1.05

 4.17 PlyA -  93285  93280    6                               1.05
 4.16 Term - 108371 108264  108  2  0  129   42   111 0.872   8.13
 4.15 Intr - 113720 113601  120  2  0   89   92    46 0.945   4.87
 4.14 Intr - 116014 115961   54  1  0   66  100    36 0.633   0.86
 4.13 Intr - 117917 117809  109  1  1  111   91    24 0.983   4.37
 4.12 Intr - 119274 119215   60  2  0  130  105    66 0.998   9.43
 4.11 Intr - 120705 120575  131  0  2   54  115   111 0.435   8.97
 4.10 Intr - 139221 139129   93  0  0   80  115    19 0.142   3.04
 4.09 Intr - 146083 145982  102  1  0  123   80    85 0.817  10.65
 4.08 Intr - 162293 162121  173  0  2   -7   41   162 0.368   0.74
 4.07 Intr - 163866 163835   32  2  2  127   63    49 0.481   3.16
 4.06 Intr - 164111 163990  122  2  2   87   54    90 0.525   3.87
 4.05 Intr - 177959 177678  282  2  0   75  101   157 0.217  12.39
 4.04 Intr - 198332 198245   88  1  1  100    8    68 0.000  -0.95
 4.03 Intr - 207689 207513  177  1  0   69   37   180 0.024   9.11
 4.02 Intr - 222494 222345  150  1  0   77   88    28 0.020   0.06
 4.01 Init - 235383 235346   38  0  2   62   59    46 0.027  -1.33
 4.00 Prom - 239475 239436   40                              -4.75

 5.00 Prom + 252319 252358   40                              -1.45
 5.01 Sngl + 266796 267212  417  2  0   72   49   375 0.860  26.05
 5.02 PlyA + 268612 268617    6                               1.05

 6.00 Prom + 279077 279116   40                              -6.15
 6.01 Init + 284505 284530   26  2  2   77   58    43 0.237  -0.75
 6.02 Intr + 287436 287551  116  0  2   21   91   115 0.649   4.27
 6.03 Intr + 291871 292247  377  2  2   69   65   329 0.481  22.51
 6.04 Term + 300376 300474   99  0  0   93   32    84 0.428   0.45
 6.05 PlyA + 300910 300915    6                               1.05

 7.03 PlyA - 303235 303230    6                               1.05
 7.02 Term - 318971 318347  625  1  1  -11   36   760 0.249  53.77
 7.01 Init - 319263 319052  212  0  2   66   -3   318 0.999  16.81
 7.00 Prom - 321372 321333   40                              -6.65

 8.02 PlyA - 321658 321653    6                               1.05
 8.01 Sngl - 323931 322768 1164  0  0   70   44   806 0.999  70.28
 8.00 Prom - 333341 333302   40                              -5.45

 9.00 Prom + 337125 337164   40                              -6.45
 9.01 Sngl + 343040 343237  198  1  0   78   49   184 0.930   8.42
 9.02 PlyA + 344125 344130    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  37105  36917  189  1  0   43   54   200 0.921   8.57
S.002 Sngl + 325498 325719  222  0  0   86   38   275 0.989  17.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_1|312_aa
MAPLVLVEKELPDSRVEEETGSQCAVVDSYLKSDLGTTWDTPYTGCTNPCLLFPQEDYNQ
LRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDPKTL
ARLLYMKEKPLTYEHGVKLAKAVQSDLNFILNLTDEETVLEDKHIANNKVKNFQSSSVDI
TTRVPDRHVNDLQLCIFPWVKWVYAFTSPLVSGLQRPEEEGDRQTKACHLDKHSNTHLGN
VPGSTEERETNTFTEGGFRDFFNQIGAQCYLECSALTQKGLKAVFDEAILTIFHPKKKKK
RCSEGHSCCSII

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_1|939_bp
atggctcctttagttctagtagagaaagaactaccagattccagggttgaggaagaaacg
ggatcccagtgcgctgtagtggactcttacctgaaatctgaccttggaactacatgggac
acaccttacacaggctgtacaaacccttgtctgctcttcccacaggaggactacaaccag
ctgaggccactctcctaccccaacacggatgtgtttttgatctgcttctctgtcgtaaac
cctgcctcttaccacaatgtccaggaggaatgggtccccgagctcaaggactgcatgcct
cacgtgccttatgtcctcatagggacccagattgatctccgtgatgacccaaaaaccttg
gcccgtttgctgtatatgaaagagaaacctctcacttacgagcatggtgtgaagctcgca
aaagcggtacagtcagatttgaatttcattttaaatcttacagatgaggaaacagtctta
gaagacaagcacatagctaataacaaagtcaaaaacttccaatccagctctgtggacatc
accactcgtgtacctgaccgtcacgtaaatgacctccaactgtgtatctttccttgggtg
aaatgggtttatgccttcacttcaccactggtgtctgggttacaaaggccagaagaggag
ggagacaggcaaacaaaagcatgccacctggataaacacagtaacacacatctgggcaat
gtaccaggtagcacagaagagagagagactaatacattcacggaaggaggtttcagagat
ttctttaaccagatcggagcacagtgctacttggaatgttcagctctgactcagaaaggt
ctcaaagcggtttttgatgaagcaatcctcaccattttccaccccaagaaaaagaagaaa
cgctgttctgagggtcacagctgctgttcaattatctga

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_2|230_aa
MKLAFLFLGPMALLLLAGYGCVLGASSGNLRTFVGCAVREFTFLAKKPGCRGLRITTDAC
WGRCETWEKPILEPPYIEAHHRVCTYNETKQVTVKLPNCAPGVDPFYTYPVAIRCDCGAC
STATTELRLMPGEAAVALGFWCQRRRQGSRTTGTRWRHAAVRDKVSLLKAVDGWNGLLGD
PASSQGLSASSCTPVFPLAFQIDSASGKVGNFSSKQTFIFSSAEITLGGT

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_2|693_bp
atgaagctggcattcctcttccttggccccatggccctcctccttctggctggctatggc
tgtgtcctcggtgcctccagtgggaacctgcgcacctttgtgggctgtgccgtgagggag
tttactttcctggccaagaagccaggctgcaggggccttcggatcaccacggatgcctgc
tggggtcgctgtgagacctgggagaaacccattctggaacccccctatattgaagcccat
catcgagtctgtacctacaacgagaccaaacaggtgactgtcaagctgcccaactgtgcc
ccgggagtcgaccccttctacacctatcccgtggccatccgctgtgactgcggagcctgc
tccactgccaccacggagctgaggttgatgccaggggaagctgctgtggcactgggcttc
tggtgtcagcgtaggagacagggatctaggacaacagggaccaggtggcgacatgcagct
gtgagagacaaggtgagtctcctgaaggcagtagatggttggaatgggctgcttggggac
ccagcgagctcccagggcctttctgcttcttcctgtacccctgtatttcccttggctttc
caaattgactcagcttctggtaaagttggaaacttttccagcaaacagaccttcatcttc
tccagtgcagagattacattaggaggaacatga

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_3|60_aa
MVPGAVAAILQAGGYKPVNENQCDEDSRVVTVKSLALWPTQREDDKDEGLYANPFLLSEQ

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_3|183_bp
atggtgcccggagctgtggcagccatcttgcaagcaggaggatacaagcctgtgaatgaa
aatcagtgcgacgaggacagcagagtggtgacagtaaagtccctggccctttggcctact
caacgtgaagatgacaaagatgaaggcctttatgctaatccatttctacttagtgaacag
taa

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_4|612_aa
MTVGKGYRDAWAFDINEDPRHLKTFQRFIHTKLEKHPFLKPCQAKHDVDLKRKKEKKRND
VKSVAPVDPPFMELPAGAGSVLPWTPQQKMEALGSEPAQLFSSGALFPPPSSWGAACREC
AVCSNQTTRLPPTERGEVGQVPRVTFDPSLSLAFEVTFTENSCYLEIDDRLTPFPFFFLD
VPSSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYP
EVVRMKFQKSGSSARWCSLCGNIGVAIPYLCIIEGPHLAALFVLNWQAMRAAKESLGDTE
MKERDLLADCLEEAGYTTVVHDEQEKAEKMSVLNVEFTETGVPEARIWQADNEQVSCNIF
RTLPPSDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQL
LELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEI
LGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVMF
LGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQPYYVPDAVLVAEDVCEKIKSLPS
GDSLTGENKQIL

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_4|1839_bp
atgacggttggcaagggctacagggatgcctgggcttttgatattaatgaagatccaaga
cacttaaaaacattccaaaggttcatacacacaaaacttgaaaaacatccttttctaaaa
ccatgtcaagcaaagcatgatgtagacttaaaaagaaaaaaagaaaagaaaagaaatgat
gtcaagagcgtggcccctgtggacccacctttcatggagctgcctgcaggagctggtagt
gtgctcccttggaccccacagcagaaaatggaagctctcggatctgaacctgcccagctt
ttctctagtggcgccctctttcctcctcccagttcatggggagctgcctgccgtgaatgc
gctgtgtgctcaaaccagacaacccggctcccacccactgaacgtggagaagtggggcaa
gtgccaagagtcacctttgatccctctctgtctcttgcctttgaagtaactttcacagag
aattcctgttacctggaaattgatgacagacttacaccatttcctttttttttcttagac
gttccatcctcagagcagcctgaactgttcctaaagaaacttcagcagtgctgtgtcatt
tttgacttcatggacacgctatctgatcttaaaatgaaagaatacaagcgctccactctt
aatgaactggtggactacattacaataagcagaggctgtttgacagagcagacttaccct
gaagtagttagaatgaagttccaaaaatcaggctcctctgcccgttggtgctccttatgt
ggtaacattggcgtggcgataccttacctgtgcatcatagaggggccccaccttgcagcc
ctgtttgtgttgaattggcaagctatgcgagctgccaaggaatccttaggagacacagaa
atgaaagagagggatttattggctgattgtttggaggaagctggttacaccacagtggtg
catgatgagcaggaaaaagctgagaaaatgagtgtcctcaatgtggaattcacagagaca
ggagtgcctgaggcaagaatctggcaagcagacaatgagcaggtatcttgcaatatattc
agaactctccctcctagtgacagcaatgaatttgatccagaagaagatgaacctaccctt
gaggcatcgtggccacacttacagcttgtatatgaatttttcatacgatttttggaaagc
caagaattccaacccagcattgccaaaaaatatatagatcagaaatttgtattacagctt
ctggagctatttgacagcgaagaccctcgggaacgggactacttaaaaacagtcttacac
agaatttatggcaagtttcttggtcttagagcatttatccgaaaacagattaacaatatt
tttctaaggtttgtttatgaaacagaacacttcaatggtgtagctgaactgctggaaata
ttaggaagtattatcaatggctttgctttacctcttaaggcagaacacaaacagtttctg
gtgaaagtattgatccctttacacactgtcaggagcttatcactcttccatgcacagctg
gcatattgtatagtacagtttctggagaaagatccttcactcacagaaccagtcatgttc
cttggggaactggaagaaatattggatgtgattgaaccttcacaatttgttaaaatccaa
gaacctttgtttaaacaaatcgccaagtgtgtatctagcccccattttcagccttattat
gtgccagatgctgtccttgttgctgaagacgtatgtgaaaagataaaatccttaccttct
ggggattcactgactggagaaaataaacagatactttaa

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_5|138_aa
MICGLEGRETGEVAAAGAGGGTGTCRGRSGQLRGAWGDGCPVRGPSGSAAAEPLGLTAGP
EPQRSGGGGGLTILPRGPVPSNRHRPRCGSAGGSSLTFLAGGASARCPGPGGGGDDVGRG
GREGGRLDLQRQQEKGTE

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_5|417_bp
atgatctgtggcttggaggggcgggagacgggcgaggtggccgcagcgggggcgggcggc
gggaccgggacgtgcagggggaggtccgggcagctgcggggagcctggggcgacggctgt
ccggtacggggtccctccggttccgcggcggcggagcctctaggcctcacggccggaccc
gaacctcagcgttccggtggcggcggcggcctcacgatcctcccccgcgggcccgtccca
tcaaatcggcaccgaccccgttgcggctccgccggtggctcctcgctcacattcctggcg
ggcggcgcctcagctcgttgccccggacccggcggcggcggcgacgacgtggggaggggg
ggaagggagggaggaagactggatctgcagcggcagcaagagaaggggacagaataa

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_6|205_aa
MLPVQPAEPTLKTLTKIVKINFFGTLYNNKRFAASPGAFIREKWLNLVFQEIPSGNRCFL
SPTICSSLAFQLGPGRIALAKKDGKKKSLSAISIHKRIHGVGFKKCAPRALEEIQKCAMK
EMGTPDVHIDTRLNKAVWAKGIRIVPYRIPVWLSRKRNEDENSTNKLYTLVTHEPHYLAM
TDKDRVRVLNLDINLAMQMYSLIDA

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_6|618_bp
atgcttcctgtacaacctgcagaaccaacactgaaaacactgacaaaaattgtcaaaatc
aatttctttggaacactgtacaataacaaacgttttgcagcaagtccaggagcatttatt
cgagaaaaatggctgaatcttgtgtttcaagaaataccttcagggaaccgctgctttctt
tctcccacaatctgtagttctcttgctttccaacttgggcccggcaggatcgctcttgca
aagaaggatggcaagaagaagagcctttctgccatcagcattcacaagcgcatccatggt
gtgggcttcaagaagtgtgcccctcgggcactcgaagagatccaaaaatgtgccatgaag
gagatgggcactccagatgtgcacattgatactaggctcaacaaagctgtttgggccaaa
ggaataaggattgtcccataccgtatccctgtgtggttgtccagaaaacgtaacgaggat
gaaaattcaacaaacaagctctatactttggttacccatgagcctcattacttggccatg
actgataaggaccgagttagagtgctgaaccttgacattaatctggccatgcaaatgtat
tcattaatagatgcttaa

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_7|278_aa
MWAGNAWRAALSGVPCGRSAQSVLAQLRGILEGELEGIRGAGTWKSERVITSRQGPHIHV
DGVSGGILNLTSVRFIRGTQSIHKNLEAKIARFHQREDAILYPSCCDANAGLFEVLLRPE
DAVLSDELNCASIIHGICLCKAHKYHYCHLDVAYLETKLQEAQKHRLFLVATDGAFSMDG
DIVPLQKICRLASRYGALVFVDECHATGFLGLTGQGTDELLGVMGQVTIINSTLGKALGG
ASGGYTTGPGPLVSLLLPSPISSPTVCHLLLLAAPLRP

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_7|837_bp
atgtgggctggaaacgcctggcgcgccgcgctttccggggtgccgtgcggccgcagcgcg
cagtcagtactggcccagctgcgcggcattctggagggggagctggaagggatccgcgga
gctggcacctggaagagtgagcgggtcatcacgtcccgtcaggggccgcacatccacgtg
gacggcgtctccggaggaatcctcaacttaacctcggtccgcttcatccgtggaacccaa
agcatccacaagaatctagaagcaaaaatagcccgcttccaccagcgggaggatgccatc
ctctatcccagctgttgtgacgccaacgccggcctctttgaggtcctgctgagacccgag
gacgcagtcctgtcggacgagctgaactgtgcctccatcatccacggcatctgcctgtgc
aaggcccacaagtaccactattgccacctggacgtggcctacctagaaaccaagcttcag
gaggcccagaagcatcggctgttcctggtggccaccgatggggccttttccatggatggc
gacatcgtgcccctgcagaagatctgccgcctcgcctctagatatggcgccctggtcttt
gtggatgaatgccatgccactggtttcctgggactcacaggacagggcacagatgagctg
ctgggtgtgatgggccaggtcaccatcatcaactccaccctggggaaggccctgggtggt
gcatcagggggctacacgacagggcctgggcccctggtgtcactgctgctgcccagccct
atctcttctccaacagtctgccacctgctgttgttggctgcacctctaaggccctag

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_8|387_aa
MEKIEEQFANLHIVKCSLGTKEPTYLLGIDTSKTVQAGKENLVAVLCSNGSIRIYDKERL
NVLREFSGYPGLLNGVRFANSCDSVYSACTDGTVKCWDARVAREKPVQLFKGYPSNIFIS
FDINCNDHIICAGTEKVDDDALLVFWDARMNSQNLSTTKDSLGAYSETHSDDVTQVRFHP
SNPNMVVSGSSDGLVNVFDINIDNEEDALVTTCNSISSVSCIGWSGKGYKQIYCMTHDEG
FYWWDLNHLDTDEPVTRLNIQDVREVVNMKEDALDYLIGGLYHEKTDTLHVIGGTNKGRI
HLMNCSMSGLTHVTSLQGGHAATVRSFCWNVQDDSLLTGGEDAQLLLWKPGAIEKTFTKK
ESMKIASSVHQRVRVHSNDSYKRRKKQ

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_8|1164_bp
atggaaaagattgaggaacaatttgctaatctgcacattgttaaatgttccttaggaacc
aaagagcccacttaccttcttggtatagacacatcaaagactgtccaagcaggaaaggaa
aacttggttgctgttttatgttctaatggatcaatcagaatatatgataaagaaaggtta
aatgtactacgagaatttagtggatatcctggacttcttaatggagtcagatttgcaaat
tcctgtgacagtgtatattcagcatgtactgatggcactgtgaaatgctgggatgctcga
gtagccagagaaaaacctgttcagctcttcaagggttacccttccaatatttttatcagt
tttgatattaattgtaatgatcatattatttgtgctggtacagaaaaagttgatgatgat
gcattgttggtgttttgggatgcaaggatgaattctcagaatttatctacaactaaagac
tcacttggtgcatattcagagacacatagtgatgatgtcactcaagtacgtttccatccc
agcaatcccaacatggtagtctcaggttcatctgatggcctggtaaatgtatttgatatt
aatattgataatgaggaggatgcactggttacaacctgtaactcaatttcatcagtaagc
tgtattggttggtctgggaaaggttataaacagatttactgcatgacacatgatgaagga
ttttattggtgggatcttaatcatctggacactgatgaaccagttacacgtttgaacatc
caggatgtcagagaagtagttaacatgaaagaagatgctttggactatttgattggtggc
ctatatcatgaaaagacagacacattgcatgttattggaggaacaaacaaaggaaggatt
catttgatgaactgcagcatgtcaggactgacccatgtgactagccttcagggagggcat
gctgctacagtccgttctttctgttggaatgtgcaagatgattctttgttgactggagga
gaagatgcacagttgttactttggaaacctggagctatagagaagacctttacaaagaaa
gagagtatgaaaatagcatcctctgtgcaccaacgagtacgagttcatagtaatgattct
tataaaagaaggaaaaagcagtga

>gi568815584r:63276012_63639685|GENSCAN_predicted_peptide_9|65_aa
MERMPPYFCQALRCGKSTNGRQVVGKSMERNLLLGPAGTEWSSNKEKTLQHPRPDAKHKI
VTAHS

>gi568815584r:63276012_63639685|GENSCAN_predicted_CDS_9|198_bp
atggagcgaatgcctccctacttctgccaagccttacgctgtggaaagagcaccaacggt
cggcaggtggtggggaagagcatggagagaaacctcctgttggggcctgctgggactgag
tggagcagcaacaaggagaaaactctccagcatcccaggcctgacgctaagcacaagata
gtaacagctcatagctga