GENSCAN 1.0	Date run:  8-Nov-116	Time: 07:28:25

Sequence gi568815594r:69857272_70060995 : 203724 bp : 34.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10426  10536  111  1  0  116   75    78 0.811   7.88
 1.02 Intr +  10990  11125  136  1  1   15  108    39 0.291  -1.75
 1.03 Term +  26269  26481  213  0  0   69   44   116 0.018   1.55
 1.04 PlyA +  28352  28357    6                               1.05

 2.02 PlyA -  28432  28427    6                               1.05
 2.01 Sngl -  58336  57857  480  1  0    9   48   258 0.800   9.73
 2.00 Prom -  63062  63023   40                              -2.35

 3.04 PlyA -  63372  63367    6                               1.05
 3.03 Term -  66601  66429  173  2  2   52   42   164 0.907   5.21
 3.02 Intr -  67619  67389  231  0  0   38    8   202 0.111   4.02
 3.01 Init -  67824  67722  103  0  1   47   68    98 0.675   2.22
 3.00 Prom -  70362  70323   40                              -3.65

 4.06 PlyA -  71132  71127    6                               1.05
 4.05 Term -  89643  89529  115  2  1  108   47    75 0.321   2.46
 4.04 Intr -  94787  94738   50  2  2   92   91    34 0.430   0.66
 4.03 Intr - 100533 100003  531  0  0  117   84   268 0.734  21.50
 4.02 Intr - 102808 102782   27  1  0   78  107    29 0.696   1.19
 4.01 Init - 103724 103674   51  2  0   93   87   123 0.999  11.93
 4.00 Prom - 108493 108454   40                              -3.15

 5.04 PlyA - 109127 109122    6                               1.05
 5.03 Term - 120893 120775  119  0  2   70   37   141 0.893   4.92
 5.02 Intr - 121104 120940  165  1  0   89   15   117 0.556   3.51
 5.01 Init - 123181 123067  115  1  1   97   14    85 0.468   2.42
 5.00 Prom - 130316 130277   40                              -4.65

 6.00 Prom + 130788 130827   40                              -8.05
 6.01 Sngl + 135961 136116  156  0  0   57   55   219 0.803   9.65
 6.02 PlyA + 137136 137141    6                               1.05

 7.03 PlyA - 137298 137293    6                               1.05
 7.02 Term - 158656 158065  592  0  1  -42   52   390 0.854  15.41
 7.01 Init - 159624 158972  653  0  2   66   72   339 0.646  24.91
 7.00 Prom - 160085 160046   40                              -6.15

 8.02 PlyA - 160254 160249    6                               1.05
 8.01 Sngl - 161498 161205  294  2  0   88   54   323 0.981  24.35
 8.00 Prom - 162102 162063   40                              -7.45

 9.00 Prom + 164866 164905   40                              -4.05
 9.01 Init + 165137 165191   55  1  1   52   60     3 0.268  -4.59
 9.02 Term + 168118 168257  140  2  2   80   36   270 0.817  18.14
 9.03 PlyA + 169759 169764    6                               1.05

10.00 Prom + 175302 175341   40                              -3.95
10.01 Init + 184341 184455  115  2  1   74   65    60 0.353   2.77
10.02 Term + 190385 190515  131  0  2   31   36   269 0.953  13.36
10.03 PlyA + 191330 191335    6                               1.05

11.02 PlyA - 191789 191784    6                               1.05
11.01 Term - 193004 192853  152  0  2   21   39   204 0.484   5.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  75285  75335   51  2  0   83   95    41 0.865   4.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_1|153_aa
XPFSGNHSHSNEKLKCNGCNKVRGWQQLSGGTQPPKGRYHQVITQSELPIINWMLPDPPS
YEFRHLQQYFITKWKWYKCNWAQCKLSVDLPFWVLEDHSRLLTTSLGNVLVGTLCGSSNP
TFPFCIALAEVPHEGSTLAANFSLDIQAFLYIF

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_1|462_bp
nngcctttcagtgggaaccacagtcactcaaatgaaaaacttaaatgcaacgggtgtaat
aaagtccgagggtggcaacagctaagtggtggtactcaaccaccaaaggggaggtaccac
caagttatcacgcaatctgagctgcctattattaactggatgttacctgacccaccaagc
tatgaatttaggcatttgcagcaatacttcatcaccaaatggaagtggtataaatgtaac
tgggcacaatgcaagctgtcagtggatctaccattctgggttctggaggatcatagccgt
cttctcacaacttcactaggcaatgtccttgtggggactctttgtggcagctccaacccc
acatttcccttctgcattgccctagcagaggttccccatgagggctccacacttgcagca
aacttctccctggacatccaggcatttctatacatcttctga

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_2|159_aa
MSLLGRIGSQKHKAKSHNRPSENWERQKLVVAESKSKSLKTREANSAAISLWPKAQGSPQ
TAGASPSVQRIKNLESDVQRQEEWKEAFSTGERRKPEDSARKAMLPSSGCFILVVLAAVL
VVSTHTEGRSSSSSPLSQMSVSSGNTLTDIPRNNTLPTT

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_2|480_bp
atgagtttattagggagaattggctcacaaaagcacaaggcaaagtcccataataggcca
tctgaaaactgggagagacagaaactggtagtggctgagtccaagtccaaaagcctcaaa
accagggaagccaacagtgcagcgatcagtctgtggccaaaagcccaagggtccccacaa
accgctggtgcaagtcccagtgtccaaaggataaagaacctagagtctgacgtccaaagg
caggaggagtggaaagaagcattcagcacaggagaaagaaggaagccagaagactcagca
agaaaagctatgctaccttcttcaggctgttttattctagttgtgctggcagctgttttg
gtggtgtccacccacactgaaggtcggtcttcctcttccagtccactgagtcaaatgtca
gtctcctctggcaacaccctcacagacatacccagaaacaatactttaccaaccacttag

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_3|168_aa
MKLRTLAVSVTALKVARLEFVPSDVQMCSEFLPSGGLVGLLASGVKLQTFTVSVTAHKSS
VDPNSEQQQDLLQRRKEQSFHSVEGDPSGLPHGLRQPAFILLSGPTHILLIAEEAGSGLG
QHRKGLPQCSGGLKGSSSAVKVGAQAEEAQRASEGCEDCQRAVVVTSQ

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_3|507_bp
atgaagctgcggaccctcgcggtgagtgttacagctcttaaggtggcgcgtctggagttt
gttccttctgatgttcagatgtgttcggagtttcttccttctggtgggctcgtgggcttg
ctggcttcaggagtgaagctgcagaccttcacggtgagtgttacagctcataaaagcagt
gtggacccaaacagtgagcagcagcaagatttattgcaaagaaggaaagaacaaagcttc
cacagtgttgaaggggaccccagcgggttgccacatgggctcaggcagcctgcttttatt
ctcttatctggccccacccacatcctgctgattgctgaggaagccggctccggccttggc
cagcacagaaaggggctcccacagtgcagcggtgggctgaagggctcctcaagtgccgtc
aaagtgggagcccaggcagaggaggcgcagagagcgagcgagggctgtgaggactgccag
cgtgctgtcgtcgtcacctctcagtag

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_4|257_aa
MKVLILACLVALALARETIESLSSSEDEHQDKIYPSFQPQPLIYPFVEPIPYGFLPQNIL
PLAQPAVVLPVPQPEIMEVPKAKDTVYTKGRVMPVLKSPTIPFFDPQIPKLTDLENLHLP
LPLLQPLMQQVPQPIPQTLALPPQPLWSVPQPKVLPIPQQVVPYPQRAVPVQALLLNQEL
LLNPTHQIYPVTQPLAPVHNPISVYNDKDKDYSMTLIKVCSDNVLMENVLQTTDYKLKIL
DKFINAFYDLAASAIQK

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_4|774_bp
atgaaggtcctcatcctcgcctgcctggtggctcttgctcttgcaagggagaccatagaa
agcctttcaagcagtgaggatgaacaccaggataaaatctacccctctttccagccacag
cctctgatctatccattcgttgaacctatcccctatggttttcttccacaaaacattctg
cctcttgctcagcctgctgtggtgctgcctgtccctcagcctgaaataatggaagtccct
aaagctaaagacactgtctacactaagggcagagtgatgcctgtccttaaatctccaacg
atacccttttttgaccctcaaatcccaaaactcactgatcttgaaaatctgcatcttcct
ctgcctctgctccagcccttgatgcagcaggtccctcagcctattcctcagactcttgca
cttccccctcagcccctgtggtctgttcctcagcccaaagtcctgcctatcccccagcaa
gtggtgccctaccctcagagagctgtgcctgttcaagcccttctgctcaaccaagaactt
ctacttaaccccacccaccagatctaccctgtgactcagccacttgccccagttcataac
cccattagtgtgtataatgataaagacaaagattattcaatgacacttattaaagtatgc
tctgacaatgtcctcatggaaaatgttctacaaaccactgactataaattaaagatattg
gacaagtttataaatgccttttatgatctggctgctagtgccatccagaagtga

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_5|132_aa
MDDLQGCYVIRNKPDTERQILHVLTHAEAKKVDLTEVESRTPQLGPTTQLSHSRLIILTG
SSPVFSEVKPQDTNEKPSAIGTAEVSTLSTPKLARESSADICSQPSSGKGAHSLRALSGN
MAENARKYKGAT

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_5|399_bp
atggatgatcttcaaggatgttatgttatacgaaataagccagacacagaaagacaaata
ttgcatgttctaactcatgcagaagctaaaaaagttgatctcacagaagtagaaagcaga
accccccagctagggcctacaacacagctgtcccattccaggctcatcattctgactggc
agtagccctgtgttttcagaggtgaagccccaagacacaaatgaaaaaccttctgccatc
ggcactgccgaggtctccaccctatctacccccaagctggccagggagtccagtgctgac
atctgcagccagccttcaagtgggaaaggagctcatagtctcagagcactgagtgggaac
atggctgaaaatgcaaggaaatacaaaggagccacctag

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_6|51_aa
MDIGHKWFHVSIIRELQNKEKEEQQLEQQEDKEDEEEEEKETAVKKIEKQD

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_6|156_bp
atggatattggtcataaatggtttcatgtttccatcataagagaattgcagaataaggag
aaggaggagcagcaactggagcagcaggaagacaaggaggatgaagaggaagaggagaag
gagacggcagtaaagaagatagagaagcaagattga

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_7|414_aa
MKAEIKMFFETSENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTHSKASRRQEITKIRAELKEIETQKPLQKINKSRSWFFERINKIDRPLARLIKKKR
EKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENQEEMDKFLDTYTLPKLNQEE
IESLNRPITGSEIVAIINSLPTKKSPGPDGFTAKFYQRTHDKNHMIISIDAEKAFDKIQQ
RFMLKTLNKLGIDGTYLKIIRAVYEKPTANIILNGQKLEAFPLKSGTRQGCPLSPLLFNI
VLEVLARAIREEKEIKGIQLGKEEAKLSLFADDMIVCLENPLVSAQNLLKLISNFSKVSG
YKINVQKTQAFLYTNNRQTESQITSELPFTIASKREEYYIKEAPYEIKELEQQP

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_7|1245_bp
atgaaggcagaaataaagatgttctttgaaaccagcgagaacaaagacacaacataccag
aatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaa
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagca
gaactgaaggaaatagagacacaaaaaccccttcaaaaaatcaataaatccaggagctgg
ttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaagaaaaaaaga
gagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccactgatcccaca
gaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaactagaaaat
caagaagaaatggataaattcctcgacacatacactctcccaaaactaaaccaggaagaa
attgaatctctgaatagaccaataacaggatctgaaattgtggcaataatcaatagctta
ccaaccaaaaagagtccaggaccagatggattcacagccaaattctaccagagaacccat
gacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaa
cgcttcatgctaaaaactctcaataaattaggtattgatgggacgtatctcaaaataata
agagctgtctatgagaaacccacagccaacatcatactgaatgggcaaaaactggaagca
ttccctttgaaaagtggcacaagacagggatgccctctttcaccactcctattcaacata
gtgttggaagttctggccagggcaattagggaagagaaggaaataaagggtattcaatta
ggaaaagaggaagccaaattgtccctgtttgcagacgacatgattgtatgtctagaaaac
ccccttgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcagga
tacaaaatcaatgtacaaaaaacacaagcattcttatacaccaacaacagacaaacagag
agccaaatcacgagtgaactcccattcacaattgcttcaaagagggaagagtactacatc
aaggaagcaccctatgagataaaagaattggaacagcagccttga

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_8|97_aa
MGKKQNRKTGNSKKQSASPPPKERSSSTATEQSCTENDFDELREEDFRRSNYSELQEDIQ
TKGKEVENFEKNLEECMTRITNTEKCLKELMELKTKA

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_8|294_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaaagcagagtgcctctcctcct
ccaaaggaacgcagttcctcaacagcaacggaacaaagctgtacggagaatgactttgac
gagctgagagaagaagacttcagacgatcaaattactccgagctacaggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtatgactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggcttga

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_9|64_aa
MRTHGHRKGNITHQGLLWGDLENMEEQEEEEKQKMEEEKHKQEEEKEEEGERQKKVKKED
KNPA

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_9|195_bp
atgagaacacatggacacaggaaggggaacatcacacaccagggcctgttgtggggtgat
ttggagaacatggaggagcaggaggaggaggagaagcagaaaatggaggaagagaagcac
aaacaagaagaggagaaagaggaggagggggagaggcaaaagaaagtgaagaaggaggat
aaaaacccagcataa

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_10|81_aa
MVDALFLPGSSHAGRSQTAALAVSKALWAWDPPSQAWEGDSENKEEEEKQKMEEEEPREE
EEKEEEGEKQKKVKKEDKNPA

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_10|246_bp
atggtggatgccctcttcctgccaggcagcagccacgcaggtagatctcagactgctgcg
ctagcagtgagcaaggctctgtgggcatgggacccaccaagccaggcatgggaaggagat
tcggagaataaggaggaggaggagaagcagaaaatggaggaagaggagcccagagaagaa
gaggagaaagaggaggagggggagaagcagaagaaggtgaagaaggaggataaaaaccca
gcataa

>gi568815594r:69857272_70060995|GENSCAN_predicted_peptide_11|50_aa
XHCEDKATGKRMDPSHANPSVSLALSESDNGKARWRKPGIEMIAVIKMFL

>gi568815594r:69857272_70060995|GENSCAN_predicted_CDS_11|153_bp
natcattgtgaagacaaagcaaccggaaagcgaatggacccatcacatgctaatcccagt
gttagtctagccctgagtgagtcagacaacggaaaagcacgctggaggaaaccaggcata
gaaatgattgcagtgataaagatgtttctgtag