GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:42:59

Sequence gi568815597f:99893555_100111533 : 217979 bp : 38.10% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7082   7307  226  2  1   99   63    53 0.238   0.96
 1.02 Intr +   9129   9240  112  2  1   60   87   135 0.654   9.63
 1.03 Intr +  15511  15795  285  2  0   67   81   137 0.258   7.29
 1.04 Intr +  17158  17293  136  2  1   93   67   117 0.988   8.81
 1.05 Intr +  18851  18963  113  2  2   24  103    71 0.995   1.30
 1.06 Intr +  19973  20184  212  0  2   98   66   118 0.965   8.31
 1.07 Intr +  21835  21932   98  0  2   48   89    68 0.684   0.79
 1.08 Intr +  22856  22943   88  2  1   60   58    66 0.372  -0.15
 1.09 Intr +  23044  23177  134  0  2   56  107    42 0.464   1.42
 1.10 Term +  42667  42823  157  1  1   55   54   126 0.324   2.32
 1.11 PlyA +  43624  43629    6                               1.05

 2.00 Prom +  66762  66801   40                              -3.65
 2.01 Init +  68034  68039    6  2  0   71  105    17 0.462   1.63
 2.02 Intr +  71820  72030  211  2  1   38  106   115 0.778   5.86
 2.03 Intr +  76114  76316  203  2  2   90   96   185 0.797  17.58
 2.04 Intr +  76396  76608  213  0  0  -63  105   375 0.295  22.09
 2.05 Intr +  99983 100187  205  1  1  101   42   114 0.877   5.95
 2.06 Intr + 105707 105861  155  0  2  102   80    69 0.991   6.37
 2.07 Intr + 113480 113602  123  1  0  113   93    13 0.937   4.16
 2.08 Intr + 116560 116691  132  0  0   32   94    68 0.764   1.72
 2.09 Intr + 117811 117979  169  0  1   83  111    64 0.989   6.80
 2.10 Intr + 121748 121866  119  0  2   71  103    10 0.501   0.06
 2.11 Term + 122419 122478   60  0  0   72   33    71 0.384  -3.17
 2.12 PlyA + 123441 123446    6                               1.05

 3.03 PlyA - 123870 123865    6                               1.05
 3.02 Term - 145461 144841  621  0  0   78   44   488 0.287  36.82
 3.01 Init - 149455 149450    6  1  0   94   94     0 0.268   2.13
 3.00 Prom - 151327 151288   40                              -5.15

 4.00 Prom + 153418 153457   40                              -3.55
 4.01 Init + 160238 160240    3  1  0   89   89     0 0.492   0.25
 4.02 Intr + 165112 165174   63  0  0  102   97    68 0.984   7.10
 4.03 Intr + 166324 166451  128  0  2   71   80    45 0.995   0.56
 4.04 Intr + 168281 168395  115  2  1  127   84    51 0.996   8.13
 4.05 Intr + 174423 174641  219  2  0  107  115   176 0.999  19.78
 4.06 Intr + 176060 176131   72  1  0   69  109    21 0.660   0.98
 4.07 Intr + 183611 183723  113  1  2  127  111    -8 0.962   3.66
 4.08 Intr + 184897 184994   98  1  2  101   96   137 0.986  14.53
 4.09 Intr + 186942 187105  164  1  2   31   91   105 0.835   3.87
 4.10 Term + 188449 188655  207  0  0   87   49    38 0.758  -3.84
 4.11 PlyA + 189785 189790    6                               1.05

 5.11 PlyA - 190038 190033    6                               1.05
 5.10 Term - 191880 191774  107  1  2  126   31    50 0.928   0.69
 5.09 Intr - 192076 191982   95  0  2   64  115    35 0.936   2.49
 5.08 Intr - 194682 194585   98  0  2  106  106    13 0.914   2.79
 5.07 Intr - 209529 209401  129  0  0  102   63    52 0.923   4.07
 5.06 Intr - 212349 212213  137  1  2   55   83    71 0.877   2.67
 5.05 Intr - 213439 213358   82  1  1   63   84    51 0.900   0.49
 5.04 Intr - 213999 213820  180  0  0  -21   53   207 0.925   5.44
 5.03 Intr - 214163 214074   90  2  0   27   76    97 0.761   1.67
 5.02 Intr - 214450 214256  195  1  0  130   19   197 0.999  15.69
 5.01 Intr - 216929 216738  192  2  0   57   57   151 0.971   7.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:99893555_100111533|GENSCAN_predicted_peptide_1|520_aa
XNIILAFAGTLRHGLIPNLLGEGIYARYNCRDAVWWWLQCIQDYCKMVPNGLDILKCPVS
RMYPTDDSAPLPAGTLDQPLFEVIQEAMQKHMQGIQFRERNAGPQIDRNMKDEVGSVRGT
PSLLGRAWKSGLSTQSLLTACCQERGALSLTTCFHWGWKSILPTQFVLTSCSRGGKHPEL
PAATPRPPTTARLGVEVHTPQIPLVVPAGFNITAGVDEETGFVYGGNRFNCGTWMDKMGE
SDRARNRGIPATPRDGSAVEIVGLSKSAVRWLLELSKKNIFPYHEVTVKRHGKAIKVSYD
EWNRKIQDNFEKLFHVSEDPSDLNEKHPNLVHKRGIYKDSYGASSPWCDYQLRPNFTIAM
VVAPELFTTEKAWKALEIAEKKLLGPLGMKTLDPDDMVYCGIYDNALDNDNYNLAKGFNY
HQGPEWLWPIGYFLRAKLYFSRLMGPETTAKTIVLVKNVLSRHYVHLERRRARELPNAGI
SHNTSRPSGQGASSSRPRAKQGPGSQGAAPAVDVLSQQSG

>gi568815597f:99893555_100111533|GENSCAN_predicted_CDS_1|1563_bp
nngaatattattttagcatttgcgggtaccctgaggcatggtctcattcctaatctactg
ggtgaaggaatttatgccagatacaattgtcgggatgctgtgtggtggtggctgcagtgt
atccaggattactgtaaaatggttccaaatggtctagacattctcaagtgcccagtttcc
agaatgtatcctacagatgattctgctcctttgcctgctggcacactggatcagccattg
tttgaagtcatacaggaagcaatgcaaaaacacatgcagggcatacagttccgagaaagg
aatgctggtccccagatagatcgaaacatgaaggacgaagttgggagtgtgaggggcacc
ccatcactgctgggcagggcatggaaatccggactctccactcagtctctgctgacagca
tgctgtcaggagaggggagcactgtccctaacgacctgcttccactgggggtggaagtct
atactccccacccagtttgtgctaacatcatgcagcaggggtgggaaacaccctgagctg
cctgctgccaccccaaggccacctactactgccaggttgggtgtggaagttcatactccc
cagattcccctcgtggtgcccgcaggttttaatataactgcaggagttgatgaagaaaca
ggatttgtttatggaggaaatcgtttcaattgtggcacatggatggataaaatgggagaa
agtgacagagctagaaacagaggaatcccagccacaccaagagatgggtctgctgtggaa
attgtgggcctgagtaaatctgctgttcgctggttgctggaattatccaaaaaaaatatt
ttcccttatcatgaagtcacagtaaaaagacatggaaaggctataaaggtctcatatgat
gagtggaacagaaaaatacaagacaactttgaaaagctatttcatgtttccgaagaccct
tcagatttaaatgaaaagcatccaaatctggttcacaaacgtggcatatacaaagatagt
tatggagcttcaagtccttggtgtgactatcagctcaggcctaattttaccatagcaatg
gttgtggcccctgagctctttactacagaaaaagcatggaaagctttggagattgcagaa
aaaaaattgcttggtccccttggcatgaaaactttagatccagatgatatggtttactgt
ggaatttatgacaatgcattagacaatgacaactacaatcttgctaaaggtttcaattat
caccaaggacctgagtggctgtggcctattgggtattttcttcgtgcaaaattatatttt
tccagattgatgggcccggagactactgcaaagactatagttttggttaaaaatgttctt
tcccgacattatgttcatcttgagaggagaagagctcgggaactgcctaatgcgggtata
agtcataacacaagcaggccgagtgggcagggtgcctccagcagcaggcccagggccaag
caaggcccaggcagtcagggggcagcaccagctgtggatgtcctcagtcagcaaagtggc
tga

>gi568815597f:99893555_100111533|GENSCAN_predicted_peptide_2|531_aa
MLTLEHQVITEALINKPHRVAIMQGSFSSFRMYRGRKGPHLPEISSWAPDSKNKSTIGKN
QKPLKYSSSEMKRFFAPKDFALPYAVDTLAPSANRQSRRGPRRVSLHLFRAPRRGVAESS
APGLHATVKQEPGAASRAAQPRRKPEHLGDGTAGTRKRLGCTELAVATATGAGGAAGQRS
RRTQRTRQPGAPGGAEPRPPVVGSAGRAAREANEDKTMFANLKYVSLGILVFQTTSLVLT
MRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRVLHDEILNKPME
TLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLS
LVILMTGVAFVQPLKYSDDPIEGEDTEHFHHPKSQLTRINIKIGGENTEKSRLFQEWPSD
SQLDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQSVWIRNIQLGFFGSIFG
LMGVYIYDGELVSKNGFFQGYNRLTWIVVVLQRYLKPRKQGSRKEGEDGKG

>gi568815597f:99893555_100111533|GENSCAN_predicted_CDS_2|1596_bp
atgctgactttagagcatcaagtgataactgaagctttgatcaacaagccccatagggta
gcaatcatgcagggtagcttctccagtttccgaatgtacagagggaggaaagggcctcat
ctccctgaaatctcctcctgggcccctgactcgaagaataagtctactataggaaaaaac
cagaagccactgaaatactcttcctcagaaatgaaaaggttctttgccccaaaggacttt
gcccttccttacgcagtggacaccttggcaccctctgcaaacagacagtcccgcagaggc
cctcgacgagtgtcactccatctgtttcgcgctcctaggagaggtgtagcagaaagcagt
gccccaggcctccacgcgacggtgaagcaggaaccaggggctgccagcagagcagcccag
ccgaggcggaagccggagcatttgggggacgggaccgcgggaacccggaaacgcctgggc
tgcaccgagctggcggtggctacggcgacgggagccggcggcgctgcgggtcagcggtcg
cgtaggacccagcggactcggcagcctggggcgcccggcggagctgaaccgcggcccccg
gtggtgggctcagccggtcgagctgcgcgggaggcaaatgaagataaaacaatgttcgcc
aacctaaaatacgtttccctgggaattttggtctttcagactaccagtttggttctaaca
atgcgttattccagaactttaaaagaagaaggacctcgttatctatcttctacagcagtg
gttgttgctgaacttttgaagataatggcctgcattttattggtctacaaagacagcaaa
tgtagtctaagagcactgaatcgagtactacatgatgaaattcttaataaacctatggaa
acacttaaacttgctattccatcagggatctatactcttcagaataatttactgtatgtg
gcactatcaaatctagatgcagctacttatcaggtcacgtatcagttaaaaattcttaca
acagcattattttctgtgtctatgcttagtaaaaaattgggtgtataccagtggctgtcc
ctagtaattttgatgacaggagttgcttttgtacagccacttaaatatagcgatgaccct
attgagggtgaagatacagaacatttccatcatccaaagagtcagttgactagaataaat
ataaagattggaggagagaacacggaaaagagcaggttgtttcaagagtggccctcagat
tctcagcttgattctaaggaactttcagctggttctcaatttgtaggactcatggcagtt
ctcacagcatgtttttcaagtggctttgctggggtttactttgagaaaatcttaaaagaa
acaaaacaatcagtgtggataagaaatattcagcttggtttctttggaagtatatttgga
ttaatgggtgtatacatttatgatggagaactggtatcaaagaatggattttttcaggga
tataaccgactgacctggatagtagttgttcttcagagatatttgaagcctaggaagcaa
ggctccagaaaggaaggtgaagatggcaaaggatag

>gi568815597f:99893555_100111533|GENSCAN_predicted_peptide_3|208_aa
MEAMTDSNTFDLKTHSDDFSLKTSRFECRPQVSAVMLPTPGSEGSPSPVRVYCKQPRAGA
PTQRDVETESERTTGPQRDPRARRHPVSNIWESRDGSQPLDKRGDGSAGPGGEGEARLRR
RGARRAGRRGSPAHSSPRRRRTWGSRPQGLQRRPEQRAAGAGKKEDGPRRPQARAAEDDS
RSGGMRVRDPEAPAARTGWGKGGRHRDA

>gi568815597f:99893555_100111533|GENSCAN_predicted_CDS_3|627_bp
atggaggccatgactgattctaatacttttgatcttaagacacacagtgatgacttttct
ttgaaaactagcaggttcgaatgtaggccccaggtgtctgccgtcatgcttccgactccg
ggaagtgagggaagcccatctccggtcagggtttactgtaagcagcccagagccggagca
ccgacgcagagagacgtggaaacagaaagcgaacgtactacggggccgcagcgggatccc
cgcgccagacgccaccccgttagcaacatatgggagagcagggatggttcccagcccctt
gacaagcgcggcgacggctccgcggggcctggcggcgaaggcgaggcgaggctgcggcga
cgaggggcgcggcgggcgggccgccgggggagccccgcacattcctccccgcggcggagg
cgcacgtggggttcgaggccgcagggcctgcagaggcggccagagcagagggcggcaggt
gcgggaaagaaagaggacgggccccggaggccgcaagcccgagcagcggaggacgattcc
cggagcggcggcatgcgggtccgcgaccccgaggcaccggcagctcggacagggtggggg
aagggagggaggcaccgggacgcctag

>gi568815597f:99893555_100111533|GENSCAN_predicted_peptide_4|393_aa
MVLHETFPKHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLM
KISPWWYFAVISVSGVFAVTFSVVFAYVADITQEHERSMAYGLVSATFAASLVTSPAIGA
YLGRVYGDSLVVVLATAIALLDICFILVAVPESLPEKMRPASWGAPISWEQADPFAIMKF
SPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMM
WAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGLGPALYGFIFYIFH
VELKELPITGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVALFIPEHTNLSLR
SSSWRKHCGSHSHPHNTQAPGEAKEPLLQDTNV

>gi568815597f:99893555_100111533|GENSCAN_predicted_CDS_4|1182_bp
atggtattacatgaaacctttcctaaacatacatttctgatgaacggcttaattcaagga
gtaaagggtttgttgtcattccttagtgccccgcttattggtgctctttctgatgtttgg
ggccgaaaatccttcttgctgctaacggtgtttttcacatgtgccccaattcctttaatg
aagatcagcccatggtggtactttgctgttatctctgtttctggggtttttgcagtgact
ttttctgtggtatttgcatacgtagcagatataacccaagagcatgaaagaagtatggct
tatggactggtttcagcaacatttgctgcaagtttagtcaccagtcctgcaattggagct
tatcttggacgagtatatggggacagcttggtggtggtcttagctacagcaatagctttg
ctagatatttgttttatccttgttgctgtgccagagtcgttgcctgagaaaatgcggcca
gcatcctggggagcacccatttcctgggaacaagctgacccttttgcgataatgaaattt
tcaccagaaagtgttgcagcgtttatagcagtccttggcattctttccattattgcacag
accatagtcttgagtttacttatgaggtcaattggaaataagaacaccattttactgggt
ctaggatttcaaatattacagttggcatggtatggctttggttcagaaccttggatgatg
tgggctgctggggcagtagcagccatgtctagcatcacctttcctgctgtcagtgcactt
gtttcacgaactgctgatgctgatcaacagggtgtcgttcaaggaatgataacaggaatt
cgaggattatgcaatggtctgggaccggccctctatggattcattttctacatattccat
gtggaacttaaagaactgccaataacaggaacagacttgggaacaaacacaagccctcag
caccactttgaacagaattccatcatccctggccctcccttcctatttggagcctgttca
gtactgctggctctgcttgttgccttgtttattccggaacataccaatttaagcttaagg
tccagcagttggagaaagcactgtggcagtcacagccatcctcataatacacaagcgcca
ggagaggccaaagaacctttactccaggacacaaatgtgtga

>gi568815597f:99893555_100111533|GENSCAN_predicted_peptide_5|434_aa
AQVQYQQQHEQQKKDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLS
GVEEELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKE
AFDTIQEQKVVLEENGEKNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKL
KNTVTIQQEKLLAEKEEKLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVKKLEESKQL
LKNNEKLITWLNKELNENQLVRKQDVLGPSTTPPAHSSSNTIRSGISPNLNVVDGRLTYP
TCGIGYPVSSAFAFQNTFPHSISAKNTSHPGSGTKVQFNLQFTKPNASLGDVQSGATISM
PCSTDKENGENVGLESKYLKKREDSIPLRGLSQNLFSNSDHQRDGTLGALHTSSKPTALP
SASSAYFPGQLPNS

>gi568815597f:99893555_100111533|GENSCAN_predicted_CDS_5|1305_bp
gcacaggttcaatatcaacagcagcatgaacaacagaaaaaagatttagaaatcctccat
caacaaaacatccaccagctacaaaacagactgtctgagttagaagcggctaataaagac
ttaaccgaaagaaaatataaaggagactccactattagagaacttaaagcaaaactttct
ggtgttgaagaggagctacagcggactaagcaagaagtcctctctttgcgaagagagaat
tctacactagatgttgaatgccacgagaaagaaaagcacgttaatcagctacaaacaaaa
gtggcagttttagaacaggaaatcaaggataaggaccagcttgttttaagaacaaaagag
gcatttgatacaatccaggaacaaaaggtggttttagaagaaaatggtgagaaaaatcaa
gtacaactaggaaagcttgaagctacaataaaatcattatctgcagaacttctgaaggca
aatgaaattatcaagaagttacaaggggatctgaaaactttaatgggtaagttgaaattg
aagaatacagttactattcagcaagaaaaactcttggctgagaaggaggaaaaattacaa
aaggaacaaaaggaattacaagatgttggacagtctcttcgaattaaagagcaagaggta
tgcaaattacaagaacaattagaagctacagttaaaaaacttgaagaaagcaaacaactt
ctaaaaaataatgaaaagttaatcacgtggttaaataaagaactaaatgaaaatcagcta
gtgagaaagcaagatgtattgggaccttctactactccgcctgcacattccagcagcaac
acaatcagaagtggaatttctcctaacctgaatgtggttgatggtagactgacttaccca
acctgtgggattggttatcctgtctcctctgcatttgcattccagaataccttccctcat
tcgatatctgccaaaaataccagccaccctggttcaggaacaaaggttcagtttaatttg
cagtttacaaaaccaaatgcatcactaggagatgttcagtcaggagcaactattagtatg
ccttgctcaactgataaggaaaatggtgaaaatgtagggttggaatccaaatacctgaag
aaaagggaagatagcattcctttacgcggactcagccagaacctatttagtaattcagac
catcagagagatggcactttaggagcattacatacatcttccaaacccacagcgctcccc
tctgcgtcttcagcctatttccctgggcagttaccaaacagttaa