GENSCAN 1.0	Date run:  7-Nov-116	Time: 23:20:48

Sequence gi568815585r:101276700_101499126 : 222427 bp : 37.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 Intr -   2392   2195  198  1  0   65   47    98 0.055   2.03
 1.12 Intr -   7320   7234   87  0  0  109   61    93 0.552   7.95
 1.11 Intr -  15395  15291  105  2  0   76  101    50 0.613   4.59
 1.10 Intr -  15667  15525  143  2  2  114   79    44 0.783   5.25
 1.09 Intr -  25217  25127   91  2  1   29   82    92 0.006   1.35
 1.08 Intr -  34544  34245  300  2  0   13   46   163 0.104   0.61
 1.07 Intr -  36018  35015 1004  1  2   -5   80   488 0.033  28.25
 1.06 Intr -  48975  48769  207  1  0    4   47   313 0.190  16.93
 1.05 Intr -  68721  68567  155  2  2   93   48    99 0.081   5.19
 1.04 Intr - 100129 100001  129  0  0   97  110    -8 0.130   1.19
 1.03 Intr - 100357 100218  140  1  2   94   61   152 0.180  11.44
 1.02 Intr - 118666 118484  183  1  0   32  105   185 0.922  13.66
 1.01 Init - 122427 122320  108  0  0   68  100   135 0.813  12.97
 1.00 Prom - 126366 126327   40                              -3.85

 2.00 Prom + 127733 127772   40                              -6.25
 2.01 Init + 131274 131278    5  2  2   61  107     0 0.571  -1.28
 2.02 Intr + 131752 131875  124  1  1   69   72   149 0.345  11.07
 2.03 Term + 139139 139345  207  1  0   47   50    95 0.031  -2.04
 2.04 PlyA + 140637 140642    6                               1.05

 3.02 PlyA - 140863 140858    6                               1.05
 3.01 Sngl - 142778 142491  288  2  0   83   40   226 0.632  12.64
 3.00 Prom - 143864 143825   40                              -9.85

 4.05 PlyA - 143883 143878    6                               1.05
 4.04 Term - 144955 144624  332  2  2    7   36   264 0.406   6.93
 4.03 Intr - 147450 147321  130  0  1   73  101     5 0.408  -0.35
 4.02 Intr - 155853 155689  165  0  0  102   47    45 0.236   1.04
 4.01 Init - 159641 159558   84  2  0  106   43    90 0.872   7.17
 4.00 Prom - 162811 162772   40                              -4.05

 5.07 PlyA - 163161 163156    6                               1.05
 5.06 Term - 171497 171222  276  2  0   75   48   119 0.841   1.08
 5.05 Intr - 173336 173120  217  1  1   65   63   109 0.543   3.68
 5.04 Intr - 177103 176916  188  1  2   95   43   152 0.333   8.97
 5.03 Intr - 177393 177246  148  2  1   64   85   140 0.472  10.62
 5.02 Intr - 179866 179573  294  0  0   20   89   169 0.403   5.40
 5.01 Init - 182676 182600   77  0  2   57   99     8 0.292  -0.59
 5.00 Prom - 182731 182692   40                              -5.35

 6.04 PlyA - 182741 182736    6                               1.05
 6.03 Term - 185721 185298  424  2  1   31   41   253 0.010   8.68
 6.02 Intr - 187046 186915  132  1  0   75   63    83 0.013   3.34
 6.01 Init - 221388 221177  212  0  2   38   93   128 0.583   6.60
 6.00 Prom - 222135 222096   40                              -3.85


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  78643  79254  612  0  0   63   48   196 0.975   9.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:101276700_101499126|GENSCAN_predicted_peptide_1|950_aa
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPMT
FEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKVFEIADIVDQMSPWGMLRIPRPL
IMIRAFRIYFRFELPRTRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFTYHCV
VNDTKPGNVTWNSLAIPDTHCSPELEEGYQCPPGFKCMDLEDLGLSRQELGYSGFNEIED
KTDISRKKAASTSLDDEQRKEAAAEEKHILLTFEEGLRGPLPPENGTWEESLDGRQYKIK
GQQLAVLYHSAIKLELRIKKLTQNRSTTWKLNNLLLNEYWVHNEMKAEIKMFFETNENKD
TTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQEIA
KIRAELKEIETQKTFQKINESRSWFFEKINKIDRPLTRLIKKKREKNQIDAIKNDKGDIT
TDPTEMQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIVAI
INSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPG
RDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQLISNFSKVSGYKINVQKS
QAFLYTNNRQTESQIMSELPFTVASKRIKYLAIQLTRDVKDLFKENYKPLLNEIKEDTNK
WKNIPCSWVGRINIVKMATLPMRLSGDQQYHHCPSASMEVEVQGVLTHTGYLGTSIFTVY
EAASQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQ
MWGSRSSTTSTATTQMFHEDAAGGWQLVAVDVNKPQGRAPACLQGKFHYFRDHTSHGHFC
NCALDMRDDQLCLLTENSPVKEGGSTFLAYESTYLTSRLEAALFVLLVLS

>gi568815585r:101276700_101499126|GENSCAN_predicted_CDS_1|2850_bp
atgctcaaaaggaagcagagttccagggtggaagcccagccagtcactgactttggtcct
gatgagtctctgtcggataatgctgacatcctctggattaacaaaccatgggttcactct
ttgctgcgcatctgtgccatcatcagcgtcatttctgtttgtatgaatacgccaatgacc
ttcgagcactatcctccacttcagtatgtgaccttcactttggatacattattgatgttt
ctctacacggcagagatgatagcaaaaatgcacatccggggcattgtcaaggtgtttgaa
attgctgatatagttgatcagatgtcaccttggggcatgttgcggattccacggccactg
attatgatccgagcattccggatttatttccgatttgaactgccaaggaccagaattaca
aatattttaaagcgatcgggagaacaaatatggagtgtttccatttttctacttttcttt
ctacttctttatggaattttaggagttcagatgtttggaacatttacttatcactgtgtt
gtaaatgacacaaagccagggaatgtaacctggaatagtttagctattccagacacacac
tgctcaccagagctagaagaaggctaccagtgcccacctggatttaaatgcatggacctt
gaagatctgggacttagcaggcaagagctgggctacagtggctttaatgagatagaggat
aaaacggatatcagccgtaagaaagcagctagcactagcctggatgatgaacaaagaaaa
gaagcagctgctgaggaaaagcacattttgctgacctttgaggagggcttaagaggccct
ttgccccctgaaaatgggacctgggaagaaagtcttgatggcagacagtacaaaatcaag
ggacagcagctggctgttttgtaccacagtgcaatcaaactagaactcaggattaagaaa
ctcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgaatactgg
gtacataatgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagac
acaacataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagca
ctaaatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaatta
aaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaatagct
aaaatcagagcagaactgaaggaaatagagacacaaaaaacctttcaaaaaattaatgaa
tccaggagctggttttttgaaaagatcaacaaaattgatagacctctaacaagactaata
aagaagaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggggatatcacc
accgatcccacagaaatgcaaactaccatcagagaatattacaaacacctctacgcaaat
aaactagaaaatctagaagaaatggataaattcctcgacacgtacaccctcccaagacta
aaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaattgtggcaata
atcaatagcttaccaaccaaaaaaagtccgggaccagatggattcacagccgaattctac
cagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaatagaaaaa
gagggaatcctccctaactcattttatgaggccagcatcatcctgataccaaagccgggc
agagacacaaccaaaaaagagaattttagaccaatatctttgatgaacattgatgcaaaa
atcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccat
gatcagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatca
caagcattcttatacaccaataacagacaaacagagagccaaatcatgagtgaactccca
ttcacagttgcttcaaagagaataaaatacctagcaatccaacttacgagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccacactg
cccatgcgccttagtggtgatcagcagtatcatcactgccctagtgcatccatggaagtt
gaggtccagggtgtactgactcacacaggttacctaggaactagtatattcaccgtctat
gaggccgcctcacaggaaggctgggtgttcctcatgtacagagcaattgacagctttccc
cgttggcgttcctacttctatttcatcactctcattttcttcctcgcctggcttgtgaag
aacgtgtttattgctgttatcattgaaacatttgcagaaatcagagtacagtttcaacaa
atgtggggatcgagaagcagcactacctcaacagccaccacccagatgtttcatgaagat
gctgctggaggttggcagctggtagctgtggatgtcaacaagccccagggacgcgcccca
gcctgcctccaggggaaattccattactttagagaccataccagtcatggtcacttctgc
aactgtgctttagacatgagagatgatcaattatgtttattaaccgagaacagtccagtg
aaagaaggaggcagtaccttcttggcttatgaaagtacttatttgacctctcgcttagaa
gctgctctgtttgtcctcctggtcttgtct

>gi568815585r:101276700_101499126|GENSCAN_predicted_peptide_2|111_aa
MSNTAENMLAGELRQHQKTDTLGITAAMRVSTTEQRPTPLPLQRFTQAAALVPRGQVQRC
SDAQWPRPQPPAPQHLLDAQAGQARGVAGPGLPKPAQGHPAAGAPDTHAQE

>gi568815585r:101276700_101499126|GENSCAN_predicted_CDS_2|336_bp
atgagcaacacagcagagaacatgttagcaggagaactaagacagcatcaaaaaactgac
accctgggcatcacagcggcaatgcgtgtctccacaacagaacagcggcccactcccctg
cccctgcagaggtttacccaggcagcggccctggtgccgagggggcaggtgcagcgctgt
agtgatgcccagtggcctcgtcctcagccacctgccccccaacacctgctagatgcccag
gcggggcaggcccgaggtgtcgccggccctgggcttcccaagccagcccaggggcatccc
gcggcaggcgcccccgacacccacgcgcaggaatag

>gi568815585r:101276700_101499126|GENSCAN_predicted_peptide_3|95_aa
MVEGERHVLHGSRREKMKTKRKGLIKPSDPMRLIHYHKNSMGETAPMIQLSPTRSLLQHM
GIVGATIQDEIWMGTQTNDITSIPKHLQDHEHNFI

>gi568815585r:101276700_101499126|GENSCAN_predicted_CDS_3|288_bp
atggtggaaggcgaaaggcacgtcttacacggcagcagacgagagaaaatgaagaccaag
agaaagggccttataaaaccatcagatcccatgagacttattcactaccacaagaacagt
atgggggaaactgcccccatgattcaattatctcccaccaggtccctcctacaacacatg
ggaattgtgggagctacaattcaagatgagatttggatggggacacagacaaatgatatc
acatccattccaaagcacttgcaggaccatgaacacaatttcatttaa

>gi568815585r:101276700_101499126|GENSCAN_predicted_peptide_4|236_aa
MAAALSRFPEIRNFCWYRWDAPAPVELQAVGSGLRLVPSWLPDGCVQSKPHQLIKLTQNI
LWEVKHVSDLTFLFKNEKDLSQKLISMTQLKAICQPFKDLHSDSADGFLPPTCAHLFLVL
QITQLQFLLRNTFCKAIAAIDSYSSGGSGLSKLKTLWKGFTIPDAVKYIPDSWKNIKISA
LTGAWINLIPTPVDDFEGFKTSVEEVTADLVEIVRELELEIEPEDVTELLQSHDKT

>gi568815585r:101276700_101499126|GENSCAN_predicted_CDS_4|711_bp
atggctgctgccttgtccaggttccccgagattcgcaacttctgttggtataggtgggat
gcgccagctcctgtagaacttcaggctgttggctctggtctcagacttgtcccttcatgg
ttaccagatggctgtgtccagtctaaacctcaccaactcataaaactcactcagaatatc
ctctgggaagtaaagcatgtctctgacttaacgttcctttttaagaatgaaaaagatctt
tctcagaagctgatttcaatgacacaattaaaggccatatgccaacctttcaaagacctc
cactctgactcagcagatggatttttaccacctacttgcgctcacctgtttttagtgctt
cagataacacagctacaattcttattaagaaatacattttgtaaggctatagctgctata
gatagctattcttctggtggatctggactaagtaaattgaaaaccctctggaaaggattc
accattccagatgctgttaagtacattcctgattcatggaagaatataaaaatatcagct
ttaacaggggcttggataaacttgattccaacccccgtggatgactttgaggggttcaaa
acttcagtggaggaagtaactgcagatttagtggaaatagtgagagaactagaattagaa
atagagcctgaagatgtgaccgaattgctacaatctcatgataaaacttaa

>gi568815585r:101276700_101499126|GENSCAN_predicted_peptide_5|399_aa
MLNVTQNRRFFISIRILLQKKALNIRSWRGLRKLLYFWKGPTGTFMEVKAQGHINIGNLL
YFHIPVIQLELSLKNKTEKLNLKHGIHRRARKAALGATCRDLRMGPTNVVRAFAGTDSAQ
GPVECSRRRSRTPTHGTHTGARRTCPAQSRGRCRRRSRSGPGRGTARPPGAAQCPLQVQT
YNPKNRTPEAHISLGSKRCLEGLYFPKQTGITHQRNDQGPKCVMGDLPPDTGPSSSFQNL
KDAHVPRKVLSFSLLLAGDTAVGWMHNEGCLKGPGASGTEFKKIENTLVLEWSPSVLRLH
NQRISAFKIPSPGPMYPPISLMTVITADESQLPLSPRLALCIRGQASQRLITQIQDSSLI
STSNSIDIIKPLTYGNCRAGQLHHCASVNNAEKTQRFKN

>gi568815585r:101276700_101499126|GENSCAN_predicted_CDS_5|1200_bp
atgctcaatgtcacacagaatagaaggttcttcatatccataaggatactgttacagaaa
aaggcactaaatatcagaagttggagaggtctccgaaagttactctatttctggaaagga
cctacaggaactttcatggaggtgaaagcacaggggcacataaacataggaaacctgcta
tatttccatattccagtgatacaactggaactatctcttaaaaataaaactgagaagcta
aatttgaagcatggaatacatcgacgggctcgcaaggcagccctaggtgctacttgtagg
gatctccgcatgggccccacaaacgtggtcagggcatttgcggggacagattctgctcaa
ggccctgtagagtgctcccgtcgtaggtctcgcacacccactcatggcactcacacaggg
gcccgaagaacatgcccggctcagtcacgtggcagatgcagacgccgcagtcgcagcggc
cccggccgtggcacagcgcggcccccgggggctgcccagtgtcccctccaggtgcagacg
tacaaccccaagaacaggacgcctgaggcccacatctctctggggtccaagcgctgcctg
gaagggctgtattttcccaagcaaacaggtatcacccaccagagaaatgaccagggccca
aaatgtgtaatgggtgacctgcccccggacacaggtccttcctccagttttcagaacctc
aaggacgcacatgtgccaagaaaggtcctgagtttctcacttctgctggctggggacaca
gcagtaggttggatgcataatgaagggtgcctgaaaggaccgggtgcatctggaactgaa
ttcaaaaagattgaaaacaccctagtccttgaatggagtccttcagtcctcaggttacac
aatcagagaatttcagccttcaagatcccctctccggggcccatgtatccacccatctcg
ctgatgacagtaataactgctgatgagtcacagctgcccctctcaccgagacttgccctg
tgcataagaggacaggcttcccagaggctgatcactcagattcaagacagttccctaatc
tctacctccaacagtattgacatcattaagcctctcacatatggaaactgtagagctgga
cagctccatcattgtgcttctgtcaacaatgcagaaaagactcaaagattcaaaaactga

>gi568815585r:101276700_101499126|GENSCAN_predicted_peptide_6|255_aa
MCIPGVPNHKTEWKTLLSEIPTQNQTLLLEKHPDQTKSPPTSAGTVDVLNCVEGTFIFES
KSRECCSGPKSFATEEAVSGINLFGINNLEEIKEHPRSTGISVEGRVRSRIALIERVTML
RRLWAFKDSHTLAPETCKYVTLRGKSDFADVMKFMSLGWEAYPGLSGFSLVKIHLKSGVC
FPTVVRRDVMMEEALGDSGVRKVSQPVSSFEIWEWGTCKDPKVASRRQEGPQLTASKELG
TTVLQPHRTKLSQHQ

>gi568815585r:101276700_101499126|GENSCAN_predicted_CDS_6|768_bp
atgtgcataccaggagtaccaaatcataaaactgaatggaaaaccttactgagtgaaatc
ccaacacagaaccagacactactattggaaaaacatcctgatcagacaaaatctccccca
acctcggctggaactgtagacgtattaaactgtgtggaaggaacattcatctttgaatcc
aagagcagagaatgttgtagtggcccgaaaagttttgcaactgaagaagcagtttctggg
atcaacctatttgggatcaacaatttagaggagatcaaggaacaccctagaagtacaggc
atctcagtggagggaagagtcagaagcagaattgcacttatagagagggtgactatgctg
agaagactatgggccttcaaagatagccatacccttgctcctgaaacctgtaaatatgtc
accttacgtggcaaaagtgactttgctgatgtgatgaagtttatgagtcttggatgggaa
gcttatcctggattatctgggttcagtctagttaaaatacaccttaaaagtggagtatgt
tttccgacggtggtaagaagggatgtgatgatggaagaggctctgggagacagcggtgtg
agaaaggtctcacaacctgtttccagttttgagatttgggagtggggtacttgtaaggac
ccgaaagtagcttctagaagacaagagggaccccaactgacagccagcaaggaactgggg
accacagtcttacaaccacacagaactaaattatctcaacaccaataa