GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:02:17

Sequence gi568815589r:93852167_94052948 : 200782 bp : 47.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9621   9730  110  1  2   85  105    53 0.774   6.70
 1.02 Intr +  14152  14230   79  0  1   67   77    11 0.355  -2.98
 1.03 Intr +  18565  18609   45  2  0  119   92    32 0.801   5.08
 1.04 Term +  18874  18971   98  2  2   82   43    61 0.273  -0.87
 1.05 PlyA +  20951  20956    6                               1.05

 2.00 Prom +  23613  23652   40                              -5.86
 2.01 Init +  27998  28214  217  1  1  100   44   149 0.396   8.84
 2.02 Term +  37426  37505   80  2  2   74   50    69 0.152  -0.37
 2.03 PlyA +  37846  37851    6                               1.05

 3.05 PlyA -  41247  41242    6                               1.05
 3.04 Term -  46835  46372  464  0  2   84   54   194 0.325  10.82
 3.03 Intr -  49087  48994   94  1  1   76   81    40 0.254   1.64
 3.02 Intr -  50749  50690   60  1  0  108   35    53 0.098   0.93
 3.01 Init -  57462  57313  150  0  0   81  108    63 0.706   5.67
 3.00 Prom -  59690  59651   40                              -2.16

 4.00 Prom +  60929  60968   40                              -6.36
 4.01 Init +  66580  66591   12  0  0   37   97    15 0.243  -2.55
 4.02 Intr +  68092  68196  105  0  0   62   47   149 0.986   8.61
 4.03 Intr +  68878  68994  117  0  0  119   41   118 0.987  10.86
 4.04 Intr +  71870  71954   85  1  1   92   62    23 0.362  -0.51
 4.05 Term +  73889  74067  179  0  2   73   48   110 0.603   3.35
 4.06 PlyA +  75095  75100    6                               1.05

 5.00 Prom +  82293  82332   40                              -4.86
 5.01 Init +  96358  96428   71  0  2   81  103   141 0.992  13.43
 5.02 Intr +  96925  97096  172  1  1   83   70    12 0.483  -1.15
 5.03 Term +  97626  97754  129  2  0   63   43    95 0.329   0.68
 5.04 PlyA +  98154  98159    6                              -1.75

 6.05 PlyA -  99482  99477    6                               1.05
 6.04 Term - 100162  99998  165  1  0   76   55   222 0.802  15.62
 6.03 Intr - 100647 100563   85  2  1   86   73    97 0.408   7.82
 6.02 Intr - 101021 100730  292  0  1  103   91   387 0.999  36.69
 6.01 Init - 102980 102758  223  2  1   99   79   383 0.982  35.22
 6.00 Prom - 110124 110085   40                              -3.46

 7.00 Prom + 113275 113314   40                              -6.66
 7.01 Init + 116949 117196  248  2  2   73   93   107 0.142   5.23
 7.02 Intr + 123677 123866  190  2  1   71   92    19 0.047   0.19
 7.03 Term + 140501 140605  105  1  0  102   54    72 0.458   3.61
 7.04 PlyA + 140742 140747    6                               1.05

 8.03 PlyA - 143995 143990    6                               1.05
 8.02 Term - 147518 147400  119  0  2   82   39    90 0.675   2.20
 8.01 Init - 149890 149731  160  1  1  100   65    35 0.645   2.11
 8.00 Prom - 168658 168619   40                              -2.46

 9.03 PlyA - 169422 169417    6                               1.05
 9.02 Term - 171110 170477  634  1  1   17   36   298 0.351  11.26
 9.01 Init - 171421 171240  182  1  2   45   69    73 0.414  -0.24
 9.00 Prom - 171884 171845   40                              -4.96

10.07 PlyA - 172053 172048    6                               1.05
10.06 Term - 173231 173073  159  2  0   75   35   153 0.980   6.64
10.05 Intr - 178372 178165  208  0  1   64   72   126 0.683   7.68
10.04 Intr - 178638 178461  178  1  1   70   69   137 0.922   8.98
10.03 Intr - 186039 185923  117  1  0   94   78    55 0.640   5.54
10.02 Intr - 192989 192906   84  0  0   81   47    54 0.186   0.39
10.01 Init - 194280 193140 1141  0  1   86   60   139 0.242   5.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_1|110_aa
XPVASAHYWLRSLAILACFDPPSTTLWGRLFAMKDAEVTSRKHLLCALRPPKPPILNLYP
PHHGGDTEIQRVAVTQLAGSLRQRPYLVGPVRAQYPAEYQELTGQLHSYE

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_1|333_bp
ngacctgtggcatctgcccactactggctgcggagcttggccatcctggcatgttttgat
cctccctctacaaccctctggggcagactgtttgctatgaaggatgcagaggtcacttcc
aggaagcatctcctctgcgccctccgacctcctaaacccccaatcctgaatctatatccc
ccacatcatggtggggacactgagatccagagagtagctgtgacacagctggcaggttct
ctgagacagagaccttatctggtgggtcctgtccgtgcccagtacccagccgagtatcag
gagctgacagggcagctgcactcttatgagtaa

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_2|98_aa
MPERPHYPLRGGLLRSLSLPDECPPPPCSTAPSPIYHPRTEECRRMVRDWQAAPPVTPVQ
DPLGEASWAPESAVRELTNTEEMMIKRGILDGVLEQKR

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_2|297_bp
atgcctgagcgcccccactaccccctgcgcggtgggctcctgcgcagcctgagcctcccc
gacgagtgcccccccccaccctgctccacggcgcccagtcccatctaccacccaaggact
gaggagtgcaggcgcatggtgcgggactggcaggcagctccacctgtgaccccagtgcag
gatccactgggtgaagccagctgggctcctgagtctgcagtgcgagagctgactaataca
gaagagatgatgattaaacgtgggatactggatggggttctggaacagaaacgttag

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_3|255_aa
MAVLCGGLGATWWLRTCWGRGGAISTVPPGDCVDHSEAQEGTKAAKLTEQLCSPRYPVPC
AKVTQQEAGRPLPSDICQVEKDRAHLFPCSSKWPADASTEQGDCGGPGKGCQPQAREHLC
RQEPLNLLCDSGATKFFPMGEAASYTLCCQGPRSGWETSHEQLLLLSGHGSLVHGLLWPL
LLPLEESPITITSLAIHIVGGGDWAVSGCHVALSATSSLETDRSPGLVLRPDHAQVVFDR
KSELPADRCDGRSAF

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_3|768_bp
atggctgtgctgtgtggtggcttgggagctacatggtggctgagaacctgttggggcagg
ggtggtgctatctccacagtcccacctggagactgtgtggaccactctgaggctcaggag
ggaacaaaagctgccaagctcacagagcaactctgcagcccccgctatcctgttccttgt
gctaaagtcacccagcaagaagctggcaggcctctgccatcagacatctgccaggtggag
aaagatagggcccatctcttcccttgctctagcaaatggccagccgacgccagcacagaa
caaggagactgtggtggtccagggaagggctgtcagccccaagcaagagagcacctctgc
agacaggagcccctcaacctgttgtgtgacagtggtgccaccaagttcttccccatgggg
gaagccgcctcctacaccctgtgctgccagggcccccgctctgggtgggaaacgagccac
gagcagctgctcctgctctctgggcacggctctctggtccacggtttgctctggcccctc
cttcttcccctagaagagtctcctatcaccatcacctcactggccattcatatcgtgggc
ggtggggactgggctgtctctgggtgccacgtagccctgtcagccacttccagcctggag
acagacaggagcccagggcttgttttacgccctgaccatgctcaggttgtcttcgacagg
aagtcagagctcccagcagaccgctgtgatggccgcagtgctttctga

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_4|165_aa
MEDSKTAKENTHKSPLTGARSLEELGFAVIKLIRYMCGKVLESEGLADTSMAWRHMGGQE
LSMCKDSGEQRAMLEQLQVQPPIVIENAPSLSLCGLQGTIQALGCPGTVLDSGYSHRQDK
SVTAHTATTLCVKEEPPAHSDHDSVHDSDDTQVSQQRHGDSHVHE

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_4|498_bp
atggaggactcgaagacagccaaggaaaacacgcacaagtccccactgaccggtgcacgc
agccttgaagaattaggtttcgcagtaattaagctcatccggtacatgtgcggcaaggta
ctggagtctgagggtctggcggacacctccatggcctggaggcacatgggtggacaggag
ctgtccatgtgcaaggattctggggagcagcgggcaatgctggagcaacttcaggtgcag
ccaccaattgtcattgagaacgcccccagcctcagcctatgtggtttacaagggactatc
caggccctgggatgcccaggcactgtgctagactcaggatacagccatagacaagataaa
agcgtgactgctcacacagccaccacactgtgtgtgaaggaagagccaccagcccactca
gatcatgactctgttcatgacagtgatgacacgcaggtgtcccagcagagacacggggac
agccatgtccatgaatga

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_5|123_aa
MGRPRSRLRLRLSSRCGGCAWSPRTLGMRRDLCIERKRNGIQGTFPSSPGPEMKDATAAC
RQRDNLSARWLGRSGTQGGRQSPGPTKTTRSRTARHLGKMPKIRKAANLLKVAFLGFSKT
GEP

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_5|372_bp
atggggcgcccccgctcgcgactacgcctgcgactgtcctcgcgctgcgggggctgtgcg
tggagcccgcggactttggggatgagaagagacttgtgcatagagcggaagaggaatggg
atccaagggacctttccttcaagtcccgggcctgaaatgaaggatgcgactgctgcctgc
aggcagagagacaacctcagcgctcggtggctggggcgcagtggcacgcagggcgggcgc
cagagccctggtcctacaaagaccactaggtccagaacagcaaggcaccttgggaaaatg
ccaaagattcgcaaggcagctaatctgctgaaggttgccttcctcggatttagtaaaacc
ggagagccctga

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_6|254_aa
MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG
VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE
LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG
LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP
AEVPGEPSDRSRED

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_6|765_bp
atgcagcggccgggggagccgggcgccgcgcgcttcggcccgcccgagggctgcgcggac
caccggccgcaccgctatcgcagcttcatgattgaggagatcctcacggagccacccggg
cccaagggcgccgcgcccgcagccgccgctgccgcggcgggcgagctgctgaagttcggc
gtgcaggcgctgctggcggcgcggcccttccacagccacctggccgtgctgaaggccgag
caggcggcggtgttcaagttcccactggcgccgctgggctgttcagggctgagctctgcg
ttgctggcggcagggcccgggctgcccggcgccgcgggtgcgccacacctgccgctcgag
ttgcagctccgcgggaagctggaggcggcaggccctggggagccaggcaccaaagccaag
aaggggcgtcggagccgcactgtgttcaccgagctgcagctgatgggcctggagaaacgc
ttcgagaagcagaagtacctttccacgccggacagaatagatcttgctgagtccctgggc
ctgagccagttgcaggtgaagacgtggtaccagaatcggaggatgaagtggaagaaaata
gtgctgcagggcggcggcctggagtctcccaccaagcccaaggggcggcccaagaagaac
tcaattccaacgagcgagcagcttactgagcaggagcgcgccaaggatgcagagaaaccg
gcggaggtgccgggcgagcccagcgacaggagccgcgaggactga

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_7|180_aa
MTPGQRPHQEVGTAAAAAHMPRIPSTVGAHSGSTCFPNQQQSEPESLWQESDGRGHRVRP
DVWGGCELGAPEACAFWSIHAARYTLLVSSHTRKIQGHTSPRAPNATLQLCGISKAASRR
NLGFPVCDRKAGFKSSQGPCQPWHYWRTQHSILPWKQRQQPSPDTKPAGTLILDIQPPDL

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_7|543_bp
atgacccctgggcagaggcctcaccaagaggtggggacagcagctgcggcggcccatatg
ccaaggataccatccacagttggagcacattcagggtccacttgcttccctaaccagcag
caaagtgaaccagagtctctttggcaggaatcagatggccgtggccaccgggtgcggcct
gacgtctggggtgggtgcgagttgggggctcccgaggcctgcgccttctggagcatccat
gcagcccgatacacattactggtctcctcccacacaaggaaaattcagggccacacaagc
cctagagccccgaatgccactttgcagctttgtggcattagcaaagctgcttcacggcgg
aacctcggtttccctgtctgtgacaggaaggctggattcaagagttctcaaggcccctgc
cagccctggcattattggaggacacagcattcaatactaccttggaagcagcgacagcaa
ccctcaccagacaccaagcctgctggcaccttgatcttggacatccagcctccagatctg
tga

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_8|92_aa
MESEDGLGPALALICSAELLATGKWEASNPAASPWLIVSQVAAVSDHYDSNDNFCEDHQK
WFAVTQQGQWYAFTVLPQATLVLLLSAIIQSK

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_8|279_bp
atggagtctgaggatgggttgggtcctgccctcgcgctcatatgcagtgctgagctcctt
gctactgggaaatgggaggctagtaacccagcagcatccccgtggttgattgtgagccaa
gtggctgctgtgtctgaccattatgacagtaatgataacttttgtgaggaccaccagaag
tggtttgctgttacccaacagggccaatggtatgcctttacggtgttgccacaggctaca
ttagttctgctgctgtctgccataatacagtctaagtga

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_9|271_aa
MKAEIKMFFETNENKDTTYHNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KINKIDRPLARLIKKKREKNQIDTIKNDKGDITTDPTDIQTTIREYYKHLYANKLENLEE
MDKFLNTYTLQRLNQEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAKFYQRYKEEL
VPFLLKLFQSTEKEGILPNSFYEASSILIPKPGRDTMKKENFRPIALMNIDAKILNKILA
NQIQQHIKKLIHHDQVGSSLECKAGSIYTNQ

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_9|816_bp
atgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacacaacataccat
aatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaa
aagatcaacaaaattgatagaccactagcaagactaataaagaagaaaagagagaagaat
caaatagacacaataaaaaatgataaaggggatatcaccaccgatcccacagatatacaa
actaccatcagagaatactacaaacacctctacgcaaataaactagaaaatctagaagaa
atggataaattcctcaacacatacaccctccaaagactaaaccaggaagaagttgaatct
ctgaatagaccaattacaggctctgaaattgaggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccaaattctaccagaggtacaaggaggaactg
gtaccattccttctgaagctattccaatcaacagaaaaagagggaatcctccctaactca
ttttatgaggccagcagcatcctgataccaaagccaggcagagacacaatgaaaaaagag
aattttagaccaatagccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggctcatccctg
gaatgcaaggctggttcaatatacacaaatcaataa

>gi568815589r:93852167_94052948|GENSCAN_predicted_peptide_10|628_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNRKRACIAKSIPSQKNKAGGIMLPD
FKLYYKATVTKTAWYWYQSRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTTYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDISMSKDF
MSKTPKAMATKAKIEKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFATYSSDKGLISRIY
NELKQIYKKKTNNPVKKWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHL
TPVRMAIIKKSGNNRCWRGCGETGTLLHCWWDCKLVQPLWKSVWRFLWVLDLELPFDPAI
PLLGIYPKDYKSCCYKDTCTRIWMKMETIILSKPLQGQKTKHRVFSLIGDAFVFIGVCVR
ESNGLTCLLPEETMEIMLSLMLASLFHARPPANVSRHTPHVTCAGQWRPEADRDESGGSG
HFRTGAGGEGTVRDAEGMARVRKGDPKVEKSEWRKSQESPGAPRTEPSDWPPLRARFLCC
SSCFYWSYRPNSYGVAAPGGSSRPQVVQRNPRSRIWERSSSPATEQSWTENDFDELREEG
FRRLNYSELQEEIQTKGKEVKNFEKNLD

>gi568815589r:93852167_94052948|GENSCAN_predicted_CDS_10|1887_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccgatg
actttcttcacagaattggaaaaaactactctaaagttcatatggaaccgaaaaagagcc
tgcattgccaagtcaatcccaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactgtactataaggctacagtaaccaaaacagcatggtactggtaccaaagcaga
gatatagaccaatggaacagaacagagccctcagaaataatgccacacatctacaactat
ctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
acttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccata
aaaactctagaagaaaacctaggcaataccattcaggacataagcatgagcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgaaaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttataagaaaaaaacaaacaaccctgtcaaaaagtgggcaaag
gatatgaacagacacttctcaaaagaagacatttatgcagccaaaagacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgt
ggagaaacaggaacacttttacactgttggtgggactgtaaactagttcaaccattgtgg
aagtcagtgtggcgattcctctgggttctagatctagaattaccatttgacccagccatc
ccattactgggtatatatccaaaggattataaatcatgctgctataaagacacatgcaca
cggatatggatgaagatggaaaccatcattctcagcaaaccattgcagggacaaaaaacc
aaacaccgcgtgttctcactcataggtgatgcctttgtttttattggcgtctgtgtaaga
gaatccaacggcctgacctgtcttctgcccgaagagaccatggagattatgctcagtctt
atgcttgcctcccttttccacgcgcgcccgcccgccaatgtcagccgccacacgccgcac
gtgacgtgtgctggccaatggaggcctgaagcggaccgtgacgagagcggtggctctggg
cattttcgaacgggcgcgggcggtgagggaaccgtgagggacgctgaggggatggcgcgg
gtgcggaaaggggaccctaaggtcgagaagagtgaatggaggaagagccaggagagccct
ggagcaccgcggacggaacccagcgactggccgcctctccgggcgcgcttcctgtgttgt
tcctcctgcttctactggtcctatcgtcccaactcttacggcgtcgcggccccaggtggt
tcgtcgcggccccaggtggttcagagaaatccgaggagcagaatctgggaacgcagttcc
tcaccagcaacggaacaaagctggacggagaatgactttgacgagttgagagaagaaggc
ttcagacgattaaactactccgagctacaggaggaaattcaaaccaaaggcaaagaagtt
aaaaactttgaaaaaaatttagactaa