GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:24:49

Sequence gi568815583r:30969836_31170229 : 200394 bp : 43.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   4621   4479  143  2  2   93   85   123 0.775  12.57
 1.04 Intr -   5168   5096   73  2  1   59   98    15 0.247  -1.42
 1.03 Intr -   7120   6984  137  2  2   58   89    43 0.076   1.69
 1.02 Intr -  21767  21612  156  0  0   47   97    59 0.456   2.68
 1.01 Init -  21875  21797   79  2  1   71   31   227 0.749  14.52
 1.00 Prom -  22502  22463   40                              -5.56

 2.27 PlyA -  23166  23161    6                               1.05
 2.26 Term -  33235  31987 1249  0  1   80   34   624 0.163  47.26
 2.25 Intr -  56436  56304  133  1  1   78  102   307 0.969  30.80
 2.24 Intr -  57282  57080  203  2  2   61   27   195 0.991   9.63
 2.23 Intr -  58641  58497  145  1  1   49   70   115 0.664   5.14
 2.22 Intr -  61322  61148  175  2  1   19   66   299 0.735  20.31
 2.21 Intr -  63105  62854  252  0  0   73   49   404 0.891  32.63
 2.20 Intr -  65839  65711  129  1  0   90   24   235 0.792  18.19
 2.19 Intr -  68007  67876  132  0  0  115   51   145 0.999  14.34
 2.18 Intr -  68331  68209  123  0  0   71   73   122 0.989   9.78
 2.17 Intr -  70511  70283  229  1  1  112  100   352 0.995  36.67
 2.16 Intr -  72408  72116  293  0  2   98   32   524 0.985  43.73
 2.15 Intr -  77416  77276  141  1  0   55   37   231 0.987  15.25
 2.14 Intr -  79674  79540  135  0  0  111   79    70 0.990   9.16
 2.13 Intr -  80747  80574  174  2  0   31   71   242 0.737  16.94
 2.12 Intr -  90809  90709  101  0  2  100   24   106 0.929   5.23
 2.11 Intr -  91679  91607   73  2  1   93  105    79 0.977   9.08
 2.10 Intr -  92867  92744  124  1  1   72   99    11 0.987   1.19
 2.09 Intr -  93457  93283  175  2  1   65   57   236 0.975  17.20
 2.08 Intr -  96412  96241  172  1  1   63  108   286 0.997  27.62
 2.07 Intr -  97352  97228  125  0  2   67   95    85 0.983   7.40
 2.06 Intr -  98257  98044  214  1  1   13  110   242 0.980  17.19
 2.05 Intr - 100391 100196  196  1  1   86   81   126 0.978  11.12
 2.04 Intr - 107149 107070   80  1  2  113   99    14 0.599   3.35
 2.03 Intr - 134204 134070  135  2  0   62  105   100 0.091   9.86
 2.02 Intr - 157465 157346  120  1  0   27   77    68 0.008   0.29
 2.01 Init - 166035 165964   72  0  0   96   82    66 0.832   7.87
 2.00 Prom - 166989 166950   40                              -6.86

 3.00 Prom + 174776 174815   40                              -1.06
 3.01 Init + 175068 175116   49  2  1   91   89    -1 0.575  -0.13
 3.02 Intr + 182048 182152  105  0  0   66   82   119 0.462   9.29
 3.03 Intr + 188059 188190  132  2  0   94   14    72 0.058   1.02
 3.04 Intr + 191049 191140   92  1  2   78   50   101 0.162   5.01
 3.05 Intr + 193699 193853  155  0  2  106   95    -3 0.137   1.07
 3.06 Term + 197846 197924   79  2  1   88   48    41 0.054  -2.66
 3.07 PlyA + 198617 198622    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:30969836_31170229|GENSCAN_predicted_peptide_1|196_aa
MGPGARVGLAVPGPSPLGRALRRIPAQRAWAAALRALRPEASALPLARDGNGAKRRRHHV
LPQAAQTHLQVLPPATAPGEIVVNEVNFVRKCIATDTSQYDLWGKLICSNFKISFITDDP
MPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRKQKVLGPNQKLKFNPTELIIYCKDFR
IVRFRFDESGPESAKK

>gi568815583r:30969836_31170229|GENSCAN_predicted_CDS_1|588_bp
atgggccccggcgcccgcgtcggcctggctgtgcccggcccctccccgctcgggcgggcg
ctgcgccgtatccccgcccaaagggcctgggcggccgcactgagagctttacgcccggag
gcgtcggcgctgccactggcccgcgacgggaacggggcgaaaaggcggcggcaccatgtt
ctccctcaagccgcccaaacccaccttcaggtcctacctcctgccaccgccccaggagaa
attgtcgtaaatgaagtcaattttgtgagaaaatgcattgcaacagacacaagccagtac
gatttgtggggaaagctgatatgcagtaacttcaaaatctcctttattacagatgaccca
atgccattacagaaattccattacagaaaccttcttcttggtgaacacgatgtcccttta
acatgtattgagcaaattgtcacagtaaacgaccacaagaggaagcagaaagtcctaggc
cccaaccagaaactgaaatttaatccaacagagttaattatttattgtaaagatttcaga
attgtcagatttcgctttgatgaatcaggtcccgaaagtgctaaaaag

>gi568815583r:30969836_31170229|GENSCAN_predicted_peptide_2|1699_aa
MEPASASCEGFRLPPLMVEEEEEPMAATHKRPQVAENEKHTQTDWASLEMPRDKLCNGLF
STVKSSHTVSMHQVIQVTSWGRMPLESGQSGENPFSPQLQLNTAQQKYKGQKSWIEKTFC
KRECIFVIPSMKDSNRCCCGQFTNQHIPPLPSATPSKNEEESKQVETQPEKWSVAKHTQS
YPTDSYGVLEFQGGGYSNKAMYIRVSYDTKPDSLLHLMVKDWQLELPKLLISVHGGLQNF
EMQPKLKQVFGKGLIKAAMTTGAWIFTGGVSTGVISHVGDALKDHSSKSRGRVCAIGIAP
WGIVENKEDLVGKDVTRVYQTMSNPLSKLSVLNNSHTHFILADNGTLGKYGAEVKLRRLL
EKHISLQKINTRLGQGVPLVGLVVEGGPNVVSIVLEYLQEEPPIPVVICDGSGRASDILS
FAHKYCEEGGIINESLREQLLVTIQKTFNYNKAQSHQLFAIIMECMKKKELVTVFRMGSE
GQQDIEMAILTALLKGTNVSAPDQLSLALAWNRVDIARSQIFVFGPHWPPLGSLAPPTDS
KATEKEKKPPMATTKGGRGKGKGKKKGKVKEEVEEETDPRKIELLNWVNALEQAMLDALV
LDRVDFVKLLIENGVNMQHFLTIPRLEELYNTSNLPPDYHISLIDIGLVLEYLMGGAYRC
NYTRKNFRTLYNNLFGPKRDDEPPAKGKKKKKKKKEEEIDIDVDDPAVSRFQYPFHELMV
WAVLMKRQKMAVFLWQRGEESMAKALVACKLYKAMAHESSESDLVDDISQDLDNNSKDFG
QLALELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMW
MGRLRMRKNPGLKVIMGILLPPTILFLEFRTYDDFSYQTSKENEDGKEKEEENTDANADA
GSRKGDEENEHKKQRSIPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVRMDGWP
SLQEWIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISTFMIGAILR
LQNQPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVL
MSFGVARQAILHPEEKPSWKLARNIFYMPYWMIYGEVFADQIDPPCGENLYDEEGKRLPP
CIPGAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDR
PVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLSDEELKRLHEFEEQCVQ
EHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKTSLQTVDLRLAQLEELS
NRMVNALENLAGIDRSDLIQARSRASSECEATYLLRQSSINSADGYSLYRYHFNGEELLF
EDTSLSTSPGTGVRKKTCSFRIKEEKDVKTHLVPECQNSLHLSLGTSTSATPDGSHLAVD
DLKNAEESKLGPDIGISKEDDERQTDSKKEETISPSLNKTDVIHGQDKSDVQNTQLTVET
TNIEGTISYPLEETKITRYFPDETINACKTMKSRSFVYSRGRKLVGGVNQDVEYSSITDQ
QLTTEWQCQVQKITRSHSTDIPYIVSEAAVQAEHKEQFADMQDEHHVAEAIPRIPRLSLT
ITDRNGMENLLSVKPDQTLGFPSLRSKSLHGHPRNVKSIQGKLDRSGHASSVSSLVIVSG
MTAEEKKVKKEKASTETEC

>gi568815583r:30969836_31170229|GENSCAN_predicted_CDS_2|5100_bp
atggagccagcgtctgcttcctgtgagggcttcaggctgcctccactcatggtggaagag
gaagaggagccgatggcagctacccacaagaggccccaagtagcagagaatgagaaacat
acacaaactgactgggcatccttggagatgccacgagataagctttgcaatggcctcttc
tccacagtcaagtcctcacacactgtgtccatgcaccaggtcatccaagtgacttcatgg
gggaggatgcctctggagagtggacagtctggtgagaaccccttttccccacagctgcag
ctcaacaccgcccaacagaaatacaagggtcagaaatcttggatagagaaaaccttttgc
aaacgggaatgtatctttgtaattcctagcatgaaagactctaacaggtgttgctgtggc
cagttcaccaaccagcatatcccccctctgccaagtgcaacacccagcaaaaatgaagag
gaaagcaaacaggtggagactcagcctgagaaatggtctgttgccaagcacacccagagc
tacccaacagattcctatggagttcttgaattccagggtggcggatattccaataaagcc
atgtatatccgtgtatcctatgacaccaagccagactcactgctccatctcatggtgaaa
gattggcagctggaactccccaagctcttaatatctgtgcatggaggcctccagaacttt
gagatgcagcccaagctgaaacaagtctttgggaaaggcctgatcaaggctgctatgacc
accggggcctggatcttcaccgggggtgtcagcacaggtgttatcagccacgtaggggat
gccttgaaagaccactcctccaagtccagaggccgggtttgtgctataggaattgctcca
tggggcatcgtggagaataaggaagacctggttggaaaggatgtaacaagagtgtaccag
accatgtccaaccctctaagtaagctctctgtgctcaacaactcccacacccacttcatc
ctggctgacaatggcaccctgggcaagtatggcgccgaggtgaagctgcgaaggctgctg
gaaaagcacatctccctgcagaagatcaacacaagactggggcagggcgtgcccctcgtg
ggtctcgtggtggaggggggccctaacgtggtgtccatcgtcttggaatacctgcaagaa
gagcctcccatccctgtggtgatttgtgatggcagcggacgtgcctcggacatcctgtcc
tttgcgcacaagtactgtgaagaaggcggaataataaatgagtccctcagggagcagctt
ctagttaccattcagaaaacatttaattataataaggcacaatcacatcagctgtttgca
attataatggagtgcatgaagaagaaagaactcgtcactgtgttcagaatgggttctgag
ggccagcaggacatcgagatggcaattttaactgccctgctgaaaggaacaaacgtatct
gctccagatcagctgagcttggcactggcttggaaccgcgtggacatagcacgaagccag
atctttgtctttgggccccactggccgcccctgggaagcctggcacccccgacggacagc
aaagccacggagaaggagaagaagccacccatggccaccaccaagggaggaagaggaaaa
gggaaaggcaagaagaaagggaaagtgaaagaggaagtggaggaagaaactgacccccgg
aagatagagctgctgaactgggtgaatgctttggagcaagcgatgctagatgctttagtc
ttagatcgtgtcgactttgtgaagctcctgattgaaaacggagtgaacatgcaacacttt
ctgaccattccgaggctggaggagctttataacacaagcaaccttccgcctgattaccac
atcagcctcatagacatcgggctcgtgctggagtacctcatgggaggagcctaccgctgc
aactacactcggaaaaactttcggaccctttacaacaacttgtttggaccaaagagggat
gatgagcctccagctaaagggaagaaaaagaaaaagaagaaaaaggaggaagagatcgac
attgatgtggacgaccctgccgtgagtcggttccagtatcccttccacgagctgatggtg
tgggcagtgctgatgaaacgccagaaaatggcagtgttcctctggcagcgaggggaagag
agcatggccaaggccctggtggcctgcaagctctacaaggccatggcccacgagtcctcc
gagagtgatctggtggatgacatctcccaggacttggataacaattccaaagacttcggc
cagcttgctttggagttattagaccagtcctataagcatgacgagcagatcgctatgaaa
ctcctgacctacgagctgaaaaactggagcaactcgacctgcctcaaactggccgtggca
gccaaacaccgggacttcattgctcacacctgcagccagatgctgctgaccgatatgtgg
atgggaagactgcggatgcggaagaaccccggcctgaaggttatcatggggattcttcta
ccccccaccatcttgtttttggaatttcgcacatatgatgatttctcgtatcaaacatcc
aaggaaaatgaggatggcaaagaaaaagaagaggaaaatacggatgcaaatgcagatgct
ggctcaagaaagggggatgaggagaacgagcacaaaaaacagagaagtattcccatcgga
acaaagatctgtgaattctataacgcgcccattgtcaagttctggttttacacaatatca
tacttgggctacctgctgctgtttaactacgtcatcctggtgcggatggatggctggccg
tccctccaggagtggatcgtcatctcctacatcgtgagcctggcgttagagaagatacga
gagatcctcatgtcagaaccaggcaaactcagccagaaaatcaaagtttggcttcaggag
tactggaacatcacagatctcgtggccatttccacattcatgattggagcaattcttcgc
ctacagaaccagccctacatgggctatggccgggtgatctactgtgtggatatcatcttc
tggtacatccgtgtcctggacatctttggtgtcaacaagtatctggggccatacgtgatg
atgattggaaagatgatgatcgacatgctgtactttgtggtcatcatgctggtcgtgctc
atgagtttcggagtagcccgtcaagccattctgcatccagaggagaagccctcttggaaa
ctggcccgaaacatcttctacatgccctactggatgatctatggagaggtgtttgcagac
cagatagaccctccttgtggtgagaacctatatgatgaggagggcaagcggcttcctccc
tgtatccccggcgcctggctcactccagcactcatggcgtgctatctactggtcgccaac
atcctgctggtgaacctgctgattgctgtgttcaacaataccttctttgaagtaaaatca
atatccaaccaggtgtggaagttccagcgatatcagctgattatgacatttcatgacagg
ccagtcctgcccccaccgatgatcattttaagccacatctacatcatcattatgcgtctc
agcggccgctgcaggaaaaagagagaaggggaccaagaggaacgggatcgtggattgaag
ctcttccttagcgacgaggagctaaagaggctgcatgagttcgaggagcagtgcgtgcag
gagcacttccgggagaaggaggatgagcagcagtcgtccagcgacgagcgcatccgggtc
acttctgaaagagttgaaaatatgtcaatgaggttggaagaaatcaatgaaagagaaact
tttatgaaaacttccctgcagactgttgaccttcgacttgctcagctagaagaattatct
aacagaatggtgaatgctcttgaaaatcttgcgggaatcgacaggtctgacctgatccag
gcacggtcccgggcttcttctgaatgtgaggcaacgtatcttctccggcaaagcagcatc
aatagcgctgatggctacagcttgtatcgatatcattttaacggagaagagttattattt
gaggatacatctctctccacgtcaccagggacaggagtcaggaaaaaaacctgttccttc
cgtataaaggaagagaaggacgtgaaaacgcacctagtcccagaatgtcagaacagtctt
cacctttcactgggcacaagcacatcagcaaccccagatggcagtcaccttgcagtagat
gacttaaagaacgctgaagagtcaaaattaggtccagatattgggatttcaaaggaagat
gatgaaagacagacagactctaaaaaagaagaaactatttccccaagtttaaataaaaca
gatgtgatacatggacaggacaaatcagatgttcaaaacactcagctaacagtggaaacg
acaaatatagaaggcactatttcctatcccctggaagaaaccaaaattacacgctatttc
cccgatgaaacgatcaatgcttgtaaaacaatgaagtccagaagcttcgtctattcccgg
ggaagaaagctggtcggtggggttaaccaggatgtagagtacagttcaatcacggaccag
caattgacgacggaatggcaatgccaagttcaaaagatcacgcgctctcatagcacagat
attccttacattgtgtcggaagctgcagtgcaagctgagcataaagagcagtttgcagat
atgcaagatgaacaccatgtcgctgaagcaattcctcgaatccctcgcttgtccctaacc
attactgacagaaatgggatggaaaacttactgtctgtgaagccagatcaaactttggga
ttcccatctctcaggtcaaaaagtttacatggacatcctaggaatgtgaaatccattcag
ggaaagttagacagatctggacatgccagtagtgtaagcagcttagtaattgtgtctgga
atgacagcagaagaaaaaaaggttaagaaagagaaagcttccacagaaactgaatgctag

>gi568815583r:30969836_31170229|GENSCAN_predicted_peptide_3|203_aa
MGFLHVGQADLELPTSVCRNQASALFAIPLKVEDTEEQGIQENEVLDLDLPGQLVCFNKH
GAEGCCFRLGNREPTLSCCVNEGPSVQRDRMKTAHCHWQSSLTFCDPDVELLSEPRLKEL
ISLSEPVSCLSDGYPISKTGSLHALGLHVLATSVLWSPRQLSTPMQKRVTLKNADLVSLP
GVTGAFSPTHLEAFSLPSVSLNY

>gi568815583r:30969836_31170229|GENSCAN_predicted_CDS_3|612_bp
atggggtttcttcatgttggtcaggctgatctcgagctcccgacctcagtgtgcaggaac
caggcaagtgccctttttgccatcccgctaaaagtagaggatacagaagaacaaggaatc
caagagaacgaggtactggacttggacctccctgggcagctggtgtgtttcaacaaacac
ggtgcagaggggtgctgctttcgattaggaaaccgggaaccgacactgagctgctgcgtc
aatgaagggcctagtgtgcaacgagatagaatgaaaacagcccactgccactggcaaagc
tcactcaccttctgcgaccctgatgtggagctcttgagcgagccccgcttgaaggagctc
atctctctcagtgagcctgtttcctgtctcagtgatggctaccccatcagcaagacagga
agccttcatgctctgggactccatgtcctagccacctctgtactgtggtctcccagacag
ctgtctacacctatgcaaaaaagggtaactttaaaaaatgcagatctggtcagtctccct
ggggtcactggggccttttcaccaactcacctggaagctttctccctgccctctgtttcc
ctgaattactga