GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:07:55

Sequence gi568815596r:38481875_38702601 : 220727 bp : 42.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +     94    930  837  0  0   35   37  1158 0.769 100.88
 1.02 PlyA +    978    983    6                               1.05

 2.05 PlyA -   5878   5873    6                               1.05
 2.04 Term -   7659   7494  166  2  1   74   45   177 0.505   8.41
 2.03 Intr -   9120   9048   73  1  1   64  116     0 0.248  -2.05
 2.02 Intr -  14604  14401  204  1  0  104   87   128 0.699  12.55
 2.01 Init -  20113  20017   97  1  1   79   74    65 0.526   2.72
 2.00 Prom -  24034  23995   40                              -5.95

 3.00 Prom +  24813  24852   40                              -5.75
 3.01 Init +  38204  38312  109  1  1   64   57    75 0.617   2.43
 3.02 Term +  38868  39016  149  1  2   71   41   178 0.622   8.48
 3.03 PlyA +  39392  39397    6                               1.05

 4.17 PlyA -  39774  39769    6                               1.05
 4.16 Term -  50725  50606  120  1  0   76   48    98 0.764   2.09
 4.15 Intr -  51675  51508  168  0  0    9   14   178 0.443   1.72
 4.14 Intr -  53885  53732  154  1  1   89   56    98 0.540   5.85
 4.13 Intr -  69912  69834   79  1  1   14   99    59 0.004  -2.71
 4.12 Intr -  86423  86325   99  0  0   97   91    54 0.821   5.76
 4.11 Intr -  86569  86512   58  1  1   78  111    64 0.970   5.24
 4.10 Intr -  87460  87259  202  0  1   39  102    53 0.801   0.17
 4.09 Intr -  88051  87930  122  1  2  109   19    89 0.823   2.47
 4.08 Intr -  91553  91336  218  0  2   89  115    80 0.760   8.10
 4.07 Intr -  95658  95587   72  1  0   65  115    59 0.142   4.76
 4.06 Intr - 100111 100039   73  1  1   52   92    30 0.217  -2.14
 4.05 Intr - 104007 103770  238  2  1  121   68   256 0.979  23.59
 4.04 Intr - 109719 109656   64  1  1   23   91    88 0.114  -0.54
 4.03 Intr - 120726 120503  224  2  2  122   58   354 0.444  32.65
 4.02 Intr - 123929 123802  128  2  2   88   47    54 0.309  -0.14
 4.01 Init - 133153 133037  117  1  0   60   53   103 0.349   4.25
 4.00 Prom - 158010 157971   40                              -3.05

 5.00 Prom + 158189 158228   40                              -5.55
 5.01 Sngl + 161309 161746  438  1  0   73   38   218 0.769   9.32
 5.02 PlyA + 164151 164156    6                               1.05

 6.00 Prom + 164310 164349   40                              -8.55
 6.01 Init + 166711 166893  183  0  0   80   17   221 0.917  13.36
 6.02 Term + 168637 168960  324  0  0   77   45   237 0.766  12.08
 6.03 PlyA + 170675 170680    6                               1.05

 7.00 Prom + 170954 170993   40                              -6.75
 7.01 Init + 184288 184477  190  0  1   39   98   193 0.680  14.63
 7.02 Intr + 194038 194192  155  2  2  119  106   134 0.959  17.17
 7.03 Intr + 199406 199612  207  1  0   50  111   212 0.357  18.05
 7.04 Intr + 207939 208020   82  2  1   89   77    95 0.674   6.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  34031  33910  122  2  2   69   84    77 0.905   5.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_1|278_aa
MQQIRMSLRGKVVVLMGKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIR
DMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQ
LIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGV
RNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAA
PVAADTTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_1|837_bp
atgcagcagatccgcatgtcccttcgcgggaaggtcgtggtgctgatgggcaagaacacc
atgatgcgcaaggccatccgagggcacctggaaaacaacccagctctggagaaactgctg
cctcatatctgggggaatgtgggctttgtgttcaccaaggaggacctcactgagatcagg
gacatgttgctggccaataaggtgccagctgctgcccgtgctggtgccattgccccatgt
gaagtcactgtgccagcccagaacactggtctcgggcccgagaagacctcctttttccag
gctttaggtatcaccactaaaatctccaggggcaccattgaaatcctgagtgatgtgcag
ctgatcaagactggagacaaagtgggagccagcgaagccacgctgctgaacatgctcaac
atctcccccttctcctttgggctggtcatccagcaggtattcgacaatggcagcatctac
aaccctgaagtgcttgataaaacagaggaaactctgcattctcgcttcctggagggtgtc
cgcaatgttgccagtgtctgtctgcagactggctacccaactgttgcatcagtaccccat
tctatcatcaacgggtacaaacgagtcctggccttgtctgtggagacggattacaccttc
ccacttgctgaaaatgtcaaggccttcttggctgatccatctgcctttgtggctgctgcc
cctgtggctgctgacaccacagctgctcctgctgctgctgcagccccagctaaggttgaa
gccaaggaagagtcggaggagtcggacgaggatatgggatttggtctctttgactaa

>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_2|179_aa
MARGWRGGLVMAYSLLDMLGLQCPWEFKVKVSRQETEALGKVEVARGLTVNCARIGGQEP
SLLEEDPPRIPSRMPRSRASASLLWAQEGCGSPQNVLLAREVHSLWQSLTHMGWLSQNCT
ESCESLGKTGGVSPGPSPRSPEGGLGECGAVGDLKANRDEVPSGALNVGLMRSVLQKDE

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_2|540_bp
atggcgaggggatggcggggagggctggtgatggcatattcacttttggacatgttgggg
ttgcagtgtccatgggagttcaaggtgaaggtgtccaggcaggaaactgaagctcttggg
aaggtggaagttgcacgtggtctcacagtcaactgtgccagaataggaggccaggaacca
tctctgctggaggaagacccaccacgcatcccttcaagaatgccaaggtccagagcaagt
gcttcccttctatgggcacaggagggctgtgggagcccacagaatgtgcttctggccaga
gaggtccatagtttatggcagtctttgacccatatgggttggctatcacaaaactgcaca
gaatcctgtgaaagcttgggaaagacaggtggagtctcccctggccccagccccaggtcc
ccagaaggtggtctgggggagtgtggagcagttggagatttgaaggcaaatcgtgatgag
gtccccagtggagcactgaatgtggggttgatgagaagcgtccttcagaaggatgaatag

>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_3|85_aa
MEERLSLNGGRRGRLRRREQQEDKQGREGPKKLTSPGSISWCGHTAIASKKHAVHGNYYD
SKHLLAELKLFLSDRLLVNGKAVPL

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_3|258_bp
atggaggaaagactgtcactaaatggagggagaagagggaggttacgtaggagagagcag
caagaagataaacagggaagggaaggaccaaagaagctgacatctcctggctccatcagc
tggtgtggccacacagctatagctagcaagaagcacgcagtccacgggaactattatgat
tctaaacaccttctggcagaactcaaactttttctaagtgatcgcctcttagtcaacgga
aaggctgtccccttatag

>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_4|711_aa
MGGASGIQGAGVKGAGKHSTTYSSLSAKNYLDQNVNGAKACPKPVSYSSIAGVPFELWQW
ELLAAAYLTAANSIKCSENSQRETYEEDREYESQAKRLKTEEGEIDYSAEEGENRREATP
RGGGDGGGGGRSFSQPVTKRGPPVRCAWLLPGKQGLGLCESVVEADLVEALEKFGTICYV
MMMPFKRQALVEFENIDSAKECVTFAADEPVYIAGQQAFFNYSTSKRITRPGNTDDPSGG
NKVLLLSIQNPLYPITVPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGEHPSSF
RHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVVMVSGLHQLK
MNCSRVFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCV
SKQHSVVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVT
EETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPSR
KRGLQTKECGQLLETGNSPQLTASSPLTLVKNACADPQSLVLPSCSLVLGKGGTTVETEE
YFGGLAGGRVFTVVQKIGSHSKQLLASISELQYSQLHWPVQMQIQVLRMAAQLPTPSSKH
HGTDSSDQAKGNHTLEGWLYRGEKMMGKEIKPKLESQTDPVCMGRQGVDET

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_4|2136_bp
atgggtggcgctagtggtatccagggggcaggggtcaagggtgctggtaaacattctaca
acgtacagctccctctcagcaaagaattatctggaccaaaatgtcaatggtgccaaggcc
tgccctaagcctgtctcctactccagtatagctggagtcccctttgagctgtggcaatgg
gagctcttggctgctgcctacttgacagcagcgaattcaatcaaatgttcagaaaatagt
caaagggagacgtacgaggaggaccgggagtacgagagccaggccaagcgtctcaagacc
gaggagggggagatcgactactcggccgaggaaggcgagaaccgccgggaagcgacgccc
cggggcgggggcgatggcggcggcggcggccggagcttctctcagccggtaacaaagcgc
ggcccccctgtccgctgtgcctggctgctccccgggaagcagggcctcggactctgtgaa
tctgtggtggaagcagacctcgtggaagcgctggaaaaatttgggacaatatgctatgtg
atgatgatgccatttaaacgacaggctctagtggaatttgaaaacatagatagtgccaaa
gaatgtgtgacatttgctgcagatgaacccgtgtacattgctggtcaacaggcttttttc
aactattctacaagcaaaaggatcactcggccaggaaatactgatgatccatcaggaggc
aacaaagttcttctgctctcaattcagaatccgctttatccaattacagtgccaactcgt
ctaaatgttattaggaatgacaatgacagttgggactacactaaaccatatttgggaaga
cgagatagaggaaagggtcgccagagacaagccattttgggagaacacccttcttcgttt
agacatgatggctatggatcccatggtccattattgcctttaccaagtcgttacagaatg
ggctctcgagatacacctgaacttgttgcttatccattaccacaggcttcttcctcttac
atgcatggaggaaatccctctggttcagttgtaatggttagtggattacatcaactaaaa
atgaattgttcaagagtcttcaacctgttctgcttatatggaaatattgagaaggtaaaa
tttatgaagaccattcctggtacagcactggtagaaatgggtgatgagtatgctgtagaa
agagctgtcacacaccttaataatgtcaaattatttgggaaaagacttaatgtttgcgtg
tctaaacaacattcagttgttccaagtcaaatatttgagctggaggatggtaccagcagc
tacaaagattttgcaatgagcaaaaataatcgctttacaagtgctggccaagcatctaag
aatataatccagccaccctcctgtgttttgcattattataatgttccattgtgtgtcaca
gaagagaccttcacaaagttgtgtaatgaccatgaagttcttacattcatcaaatataaa
gtgtttgatgcaaaaccttcagccaaaacactttctgggctattagaatgggagtgcaaa
actgatgcagtagaagcccttacggcactgaatcactatcagataagagtgccgagtaga
aaaagggggctgcaaaccaaggaatgtgggcagcttctagaaactggaaacagtcctcag
ctgacagccagcagccctcttacgcttgtgaagaacgcatgtgctgacccccagagcctg
gtcctgccgagctgctccctggtgctggggaaaggtggcacaactgtagagacagaagag
tattttgggggcctggcagggggcagagtgttcacggtggtccagaagattggcagtcat
tccaaacagctcctggccagcatcagtgaacttcagtactctcagcttcactggcctgtg
caaatgcaaatacaggtcctgagaatggctgcacagctgcctacaccctcctcaaagcat
cacgggacagacagctcagaccaagccaaaggcaaccacacactggagggctggctctac
agaggggagaagatgatgggtaaagagatcaagcctaagctagagtcacagacagaccca
gtctgcatgggtagacagggagttgatgagacttga

>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_5|145_aa
MAGRKSRALPREEAAEAQRALCGQASTAGGPRAPSAAAIPGAKPLTAWGWRCRPAARSAG
PVEPAPTWNSRWPACAACSLSSRLHFFLHTSPQAEGDGSGLGHPREGLPQCSGRLKVSSS
AASVGTKAEEAPRASEGCQYAVTSR

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_5|438_bp
atggcaggccgcaagtccagagccctgccccgcgaggaggcagctgaggcccagcgagcg
ctgtgcgggcaggccagcactgctgggggacccagggcaccctccgcagctgctatcccg
ggtgctaagcccctcactgcctggggctggcggtgccggccggctgctcggagtgcgggg
cccgttgagcccgcgcccacctggaactcgcgctggcccgcgtgcgccgcgtgcagcctc
agttcccgcctgcacttcttcctccacacctccccacaagcagagggagatggctccggc
cttggccatcccagagaggggctcccacagtgcagcggcaggctgaaggtctcctcaagc
gcggccagtgtgggtaccaaggccgaggaggcgccaagagcaagcgagggctgccagtac
gctgtcacctctcggtag

>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_6|168_aa
MHCQGCAGPRDQCRTCRTFSSRPHANCYRLQLQTSRAHRKQVDKGERRRGTQKGPVALPA
VPISLYTSPEQKGCSPTQPSLALQTGLRTTEPSRGHSPHQKKVKLASTKLDSALDVEVPT
ISRTFGQALPQGSESSIIYRETGTHSAGLLIPQGGFEKVVLQEAASGS

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_6|507_bp
atgcattgccaaggctgtgcaggaccacgggaccagtgccggacctgcaggaccttcagt
tcacgaccacatgctaactgctacaggctgcagcttcagaccagcagagcacacagaaaa
caggtggacaaaggagagagaaggcgggggacccagaaggggcccgtggctcttcctgct
gtgcccatctccctctataccagccctgaacagaagggctgttctcctacccagccctcc
ctggccttgcagacaggacttaggaccacagagccgtccaggggacattcaccacatcag
aagaaggtcaaattggcatcaaccaagctagattcagcattagatgtggaggttccaaca
atctccagaacctttggccaggctctacctcagggatctgagagcagcataatctacaga
gagacagggacacattcagcaggactgctgattccccagggaggctttgagaaagtagtg
cttcaggaagcagcatctgggagctga

>gi568815596r:38481875_38702601|GENSCAN_predicted_peptide_7|212_aa
MASVTRAVFGELPSGGGTVEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFA
ELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTP
RVLSNGVQFSRISPDGEEGYPGELKVWVTYTLDGGELIVNYRAQASQATPVNLTNHSYFN
LAGQASPNINDHEVTIEADTYLPVDETLIPTX

>gi568815596r:38481875_38702601|GENSCAN_predicted_CDS_7|636_bp
atggcttcggtgaccagggccgtgtttggagagctgccctcgggaggagggacagtggag
aagttccagctgcagtcagacctcttgagagtggacatcatctcctggggctgcacgatc
acagccctagaggtcaaagacaggcaggggagagcctcggacgtggtgcttggcttcgcc
gagttggaaggatacctccaaaagcagccatactttggagcagttattgggagggtggcc
aaccgaatcgccaaaggaaccttcaaggtggatgggaaggagtatcacctggccattaac
aaggaacccaacagtctgcatggaggagtcagagggtttgataaagtgctctggacccct
cgggtgctgtcaaatggcgtccagttctcgcgcatcagtccagatggtgaagaaggctac
cccggagagttaaaagtctgggtgacatacaccctggatggcggagagctcatagtcaac
tacagagcacaagccagtcaggccacaccagtcaacctgaccaaccattcttacttcaac
ctggcaggccaggcttccccaaatataaatgaccatgaagtcaccatagaagcggatact
tatttgcctgtggatgaaaccctgattcctacagnn