GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:02:55

Sequence gi568815594r:121038622_121264125 : 225504 bp : 37.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   1433   1309  125  1  2   78  115   119 0.714  12.91
 1.01 Init -   7216   7029  188  1  2   73   51   185 0.930  10.08
 1.00 Prom -  15457  15418   40                              -6.15

 2.00 Prom +  15639  15678   40                              -7.95
 2.01 Init +  16715  16763   49  1  1   67  119    29 0.887   5.08
 2.02 Intr +  17462  17715  254  0  2   57   61   150 0.656   5.43
 2.03 Intr +  24116  24243  128  1  2   83   40   142 0.420   7.46
 2.04 Intr +  29291  29426  136  2  1   37   46   123 0.284   2.65
 2.05 Intr +  32193  32536  344  2  2   40   69   163 0.093   2.90
 2.06 Intr +  32795  32959  165  2  0   51  106    85 0.780   4.75
 2.07 Intr +  34162  34378  217  1  1  121    7   147 0.177   7.48
 2.08 Intr +  46089  46209  121  2  1   36   60   136 0.236   4.75
 2.09 Intr +  70819  70962  144  2  0  -31  109   120 0.088   1.53
 2.10 Intr +  86876  87097  222  0  0   11   11   226 0.607   4.38
 2.11 Term +  87974  88197  224  0  2  100   33   175 0.804   9.30
 2.12 PlyA +  88303  88308    6                               1.05

 3.15 PlyA -  88560  88555    6                               1.05
 3.14 Term -  96429  96161  269  1  2   57   44   118 0.196  -1.03
 3.13 Intr - 100063 100003   61  1  1   70   81    62 0.622   1.09
 3.12 Intr - 103293 103195   99  0  0  105  100    67 0.955   8.99
 3.11 Intr - 104155 104105   51  1  0  100   91    27 0.839   2.39
 3.10 Intr - 108553 108428  126  1  0    3   87   190 0.998  10.36
 3.09 Intr - 111598 111482  117  1  0   57   94   103 0.988   7.54
 3.08 Intr - 114318 114289   30  0  0  118   97    -1 0.698   1.21
 3.07 Intr - 116058 115930  129  0  0   70   64   167 0.994  12.47
 3.06 Intr - 118622 118473  150  2  0   36   64   170 0.347   8.84
 3.05 Intr - 125525 125439   87  2  0   73   94    48 0.156   3.15
 3.04 Intr - 139935 139816  120  0  0   45   57   111 0.675   3.47
 3.03 Intr - 143892 143803   90  0  0   27  100    76 0.677   1.97
 3.02 Intr - 144175 144055  121  0  1   93  116    93 0.236  12.18
 3.01 Init - 152085 151985  101  0  2   65   89    52 0.174   2.78
 3.00 Prom - 158225 158186   40                              -3.95

 4.00 Prom + 176204 176243   40                              -3.15
 4.01 Init + 192995 193050   56  1  2   86   67    60 0.005   4.51
 4.02 Term + 203663 203816  154  2  1    8   48   234 0.886   7.81
 4.03 PlyA + 204710 204715    6                               1.05

 5.00 Prom + 209457 209496   40                              -4.95
 5.01 Init + 214979 215005   27  1  0   74   81    28 0.493   0.42
 5.02 Intr + 215450 215587  138  1  0   52   95    47 0.529   1.54
 5.03 Term + 216462 216689  228  2  0   26   53   167 0.420   2.65
 5.04 PlyA + 221178 221183    6                               1.05

 6.02 PlyA - 221250 221245    6                               1.05
 6.01 Term - 224480 224353  128  0  2  102   47    80 0.838   2.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  72092  72180   89  0  2   73   47   104 0.924   1.64
S.002 Intr + 133431 133521   91  0  1  100   82    28 0.811   2.48
S.003 Term + 137890 137952   63  0  0   -5   42   223 0.914   5.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:121038622_121264125|GENSCAN_predicted_peptide_1|105_aa
MVLLHWCLLWLLFPLSSRTQKLPTRDEELFQMQIRDKAFFHDSSVIPDGAEISSYLFRDT
PKRYFFVVEEDNTPLSVTVTPCDAPLEWKLSLQELPEDRSGEGSX

>gi568815594r:121038622_121264125|GENSCAN_predicted_CDS_1|315_bp
atggtgctgctccactggtgcctgctgtggctcctgtttccactcagctcaaggacccag
aagttacccacccgggatgaggaactttttcagatgcagatccgggacaaggcatttttt
catgattcgtcagtaattccagatggagctgaaattagcagttatctctttagagataca
cctaagaggtatttctttgtggttgaagaagacaatactccattatcagtcacagtgacg
ccctgtgatgcgcctttggagtggaagctgagcctccaggagctgccagaggacaggagc
ggggaaggctcagnn

>gi568815594r:121038622_121264125|GENSCAN_predicted_peptide_2|667_aa
MEKLGICFAVGLPECADRLNKTCEPSYKLTPAKYHITYATGHLFGKKHHPWRNSKGNGII
RNVANYTGTSREVADGELSEEKTRRELTAVTETVEKTRLERGSTKEKAAAGECRGQQRSV
IITQDRACQEKKRSRKCLVVVIALKEAAKDTPAFGTGLGTGTANARCHLRRGKKYVKYTQ
PSKQTYTEMGATRTQEQEMDSAPKGARRGTATWPEGQLRDSVEVPAANSEELMRGGSGEL
PGALTPGPGIGCGQKGEPRAHNATKPHSKFSSLQSASKKTAGTCNHSFGLLGYRGRGDSA
QLESSQTPTKNSCAAWTSSFSPYTQTPSAKPQSRRLSLAAGGGHEPGKGGNSPLGRRANP
PSLSFSHTHTTLLSDPALPKQDPRGRHREGHAAVLTLAPLGENEGGPPSPRQSCKTQETR
TRDHHTVKQTGWQYFVEAAVDSSSQFSQALELASSQSLRDVGANLPVPCPREIALARHPS
FFECRTPLFSKQVSTHEAIMDSEFRWNKLKLMMAFSIFIAKAAVRGLVLLEHCKPLLERV
ARLQDRAPSWHVDHSCGPGEGGAGVDHAQGEGSGEEQGQFKRCRSQNGHLLAEAPSAALP
AEAAVSEELHSCQLRVWLWWMDVGHYPMAKRLSYKCGNGVSVSSKHTHTQQRADSGTAVK
RWSLPEN

>gi568815594r:121038622_121264125|GENSCAN_predicted_CDS_2|2004_bp
atggaaaaactggggatatgctttgcagttggattgccagaatgtgctgataggctaaat
aaaacctgtgagccttcctacaaactcacacctgccaaataccatataacttatgctact
gggcacttatttggaaagaagcaccatccctggaggaattctaaaggcaatggaataatc
cggaatgtagcgaactacacaggcaccagcagggaagtggcagatggtgagctcagtgaa
gaaaagaccaggagggaattgactgcagtcactgagacagttgagaaaaccaggctagag
agaggaagcactaaggaaaaggctgcagctggtgagtgtcgcggtcaacaacgttcagtg
atcattacacaagatagagcctgccaagagaaaaagagatctcgaaaatgcctggtggtt
gtcattgctttgaaggaagcagccaaggatacacctgcttttggcactggcttaggcact
ggtacagcaaatgccaggtgtcatctcagaagaggcaagaaatacgtgaaatacacacag
ccaagcaaacagacttacactgaaatgggagccacccgtacccaagagcaagaaatggac
agcgccccgaagggggccaggaggggaaccgcaacttggccggagggacagctcagagac
agcgtagaggtgcccgcggcaaactccgaggagctgatgcggggcgggtccggggaactg
ccgggagctctcacgcctgggcctgggatagggtgcgggcagaaaggtgaaccgagagcg
cacaatgcaacgaaaccgcactccaaattcagcagtttgcaaagtgcctccaagaaaaca
gctgggacctgcaatcactcgttcggactcctaggttatcggggccgcggcgactccgct
cagttagaaagctcccagacgcccaccaagaactcgtgcgctgcctggacctctagcttt
tcgccctacacgcagacgccctctgcaaaaccccagtcccgcagactttccctagcggcg
ggcggagggcatgaacctggaaagggaggcaacagccctcttggcaggcgggcaaaccct
ccctccctctctttctctcacacacacaccaccctgctcagcgacccagcgctccccaaa
caggaccctcgcgggcggcatcgcgagggacacgctgctgtcctaaccttagcgccactc
ggggagaatgaaggaggcccaccgagcccccgacaaagctgcaaaacccaggagacgcgc
acgcgggaccatcacactgtcaagcagaccgggtggcagtattttgtagaagcggctgtt
gactccagttcacagttttcccaagctttagaactagcttcatcacagtccctcagagac
gtcggtgccaatttaccagtgccctgtcctcgagaaatagcccttgcacgccatccttcc
ttctttgagtgccgaacacctctcttcagcaaacaggtttcaactcatgaagcaataatg
gattcggaattccggtggaataagctcaaactgatgatggcattttcaatatttatcgca
aaagccgcagttcggggcctagtgcttctggaacactgtaagccactcctggagagagtc
gcaaggttgcaagacagggcacccagctggcatgtggaccacagttgtgggccaggtgaa
ggtggtgcaggtgtggaccatgcccagggtgaaggctctggagaggagcaggggcagttc
aagagatgtagaagccagaatgggcaccttctggcagaggcgccatccgcagccctgcct
gcagaggcagctgtgagtgaggagctgcattcttgccagctccgtgtgtggctgtggtgg
atggatgtgggtcattatcctatggccaagaggctttcctacaaatgtggaaatggagtg
tcagtttcatcgaagcatactcatacccagcaaagagcagactcaggaacagcagttaaa
agatggagtcttccagaaaattaa

>gi568815594r:121038622_121264125|GENSCAN_predicted_peptide_3|516_aa
MALIPGNLERTSELQYTSRSLLTDIDILWLIADRCESMELDKKIQDLIERNASPHPKRFT
PEAMPTHRNLCSLKPLPVTKEILQQKNLLALSTLKCPGSCDYKKFAVPLLGAPLGTTHCA
KCAQCGICLRELQMQPNTIALATETPGKTASMAHFVQGTSRMIAAESSTEHKEVAELKTK
LDAAERFLSTREKDPHQRQRKDDRQREDDRQRDLTRDRLQREEKEKERLNEELHELKEEN
KLLKGKNTLANKEKEHYECEIKRLNKLLILVVSSMKALQDALNIKCSFSEDCLRKSRVEF
CHEEMRTEMEVLKQQVQIYEEDFKKERSDRERLNQEKEELQQINETSQSQLNRLNSQIKA
CQMEKEKLEKQLKQMYCPPCNCGLVFHLQDPWVPTGPGAVQKQREHPPDYQWYALDQLPP
DVQHKANGLLSADLKTAQLGDPTLVHTPLTTLHTTLFRQPSGWEEDHMNLGSRPRITWAG
TSGMCIWVPGGACSGGNVAHTVRKGVAGGGLEQSPL

>gi568815594r:121038622_121264125|GENSCAN_predicted_CDS_3|1551_bp
atggctttaattccagggaacttggaaaggacttctgaactccagtatacctccagatcc
ctgctcactgacattgacattctatggcttatagcagacagatgtgaaagcatggagctg
gacaaaaaaatccaggatctgattgagagaaatgcgtctcctcatccaaaacggttcacc
ccagaggccatgccaactcacagaaatctatgttctctgaagccacttcctgttactaaa
gaaattcttcagcagaagaatttgctggcactttccactttaaagtgtccaggcagctgt
gactacaagaagtttgctgtaccactcttaggagcacctttgggtaccactcactgtgcc
aagtgtgctcaatgtggaatatgtcttcgagaactccaaatgcaaccaaacactattgct
cttgcgactgagactccaggaaaaacagcttccatggcacattttgtacagggcacatct
agaatgattgccgcagaaagttctacggagcataaagaggtagcagagctgaagacgaaa
ctggacgccgcggaaagattcctcagcacgcgggagaaggatccgcatcagaggcagaga
aaggacgacaggcagagagaggacgacaggcagcgcgacctgacccgggaccggctgcag
cgggaggagaaggaaaaggaacgcctaaatgaagaattacatgaattgaaagaagagaat
aaacttttaaagggaaaaaatactcttgcgaacaaggaaaaggaacattacgaatgtgaa
ataaaacgcctcaataagctactaatcttggttgttagttccatgaaggctcttcaggat
gccttgaatatcaagtgttcattttccgaggactgtttgaggaagtctcgagtggaattc
tgccatgaggagatgagaacagaaatggaagttctgaagcagcaggtgcaaatatacgaa
gaagacttcaaaaaggaacgatcggatcgagagagacttaatcaagagaaagaggagcta
cagcaaattaatgaaacttcccaatcccagttgaacaggctgaattcccagataaaagct
tgtcagatggagaaagaaaaactagaaaagcaattaaaacagatgtattgcccaccctgt
aactgcggcttggttttccacctgcaagatccatgggtaccaacaggccctggagctgtg
cagaagcaacgggagcacccaccagactatcagtggtatgctcttgaccagcttccgcca
gatgtacaacacaaggcaaatggactcttgagtgcagacttgaagacagcccagctggga
gatcccacccttgtccatacacccctcaccactctacacacaacactctttcgacagcct
tcaggctgggaagaggaccacatgaatcttggaagcaggcccagaatcacctgggcaggg
acttcggggatgtgcatttgggtgccaggaggagcttgttctggaggaaacgtcgctcac
actgtgaggaagggtgtggctggaggagggctagagcagagtcctctataa

>gi568815594r:121038622_121264125|GENSCAN_predicted_peptide_4|69_aa
MDVDKSEMQLFGTKVQLSLNFEEQPPSLKPSREHQQNHTGGLVSTEGHKLVKVNSAVAAE
QLSGKSAGI

>gi568815594r:121038622_121264125|GENSCAN_predicted_CDS_4|210_bp
atggatgtagataaatcagaaatgcagctgtttgggaccaaagtccagttatcactgaat
tttgaagagcagccaccctccctgaagccatctagggaacaccagcagaatcacactgga
ggactggtgtccacagaaggccacaagcttgtgaaggtcaactcagctgtggcagctgag
caactgtcgggcaagtctgctggaatctga

>gi568815594r:121038622_121264125|GENSCAN_predicted_peptide_5|130_aa
MKMQVTRFLVIKDSVASCLHSPLPSVTSLTLGKAGCHLVSSSPCSEKLSAPAHIPCCDYR
YEPPCLTCVGYFYGQLMLHPAGPSEEPYVMNVRIVPLEDPRGKHFQQPHPSFVKYALSVL
TLQYFQVTRG

>gi568815594r:121038622_121264125|GENSCAN_predicted_CDS_5|393_bp
atgaagatgcaagtaactcggttcctggtcattaaagatagtgtggcttcctgcttgcac
tctcctttgccctctgttacatcgctcactctggggaaagctggctgccacctcgtgagc
agcagtccatgtagtgagaaactgagtgctcctgctcacatcccttgttgcgattatagg
tatgaaccaccatgcctgacatgtgttggttacttctatggtcaactgatgctccatcca
gcaggaccttctgaggagccttatgtaatgaatgtcagaattgtccctctagaagatcca
agggggaagcatttccagcagccccatccttcatttgtcaagtatgctctatcagtgtta
actcttcagtacttccaggttacacgtgggtga

>gi568815594r:121038622_121264125|GENSCAN_predicted_peptide_6|42_aa
XQKVLRVSVPAPWYSPISCDHMKESKQSVESCLPGHPPRTRA

>gi568815594r:121038622_121264125|GENSCAN_predicted_CDS_6|129_bp
nagcaaaaggtacttcgtgtgagtgtgccagcaccatggtatagcccaatttcttgtgat
cacatgaaagaaagcaagcagtcagtagagagctgcttaccaggccatcctcctagaacc
agggcctga