GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:22:37

Sequence gi568815585f:99672825_99991410 : 318586 bp : 44.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   2529   2524    6                               1.05
 1.03 Term -  11904  11792  113  1  2   83   42    81 0.951   1.72
 1.02 Intr -  20584  20553   32  0  2   70   85     0 0.029  -4.33
 1.01 Init -  21736  21669   68  1  2   90  106    76 0.838  10.14
 1.00 Prom -  22423  22384   40                              -3.96

 2.08 PlyA -  24256  24251    6                               1.05
 2.07 Term -  31585  31431  155  2  2   39   36   181 0.618   6.08
 2.06 Intr -  33949  33867   83  0  2   73   57    56 0.218   0.28
 2.05 Intr -  36491  36432   60  1  0   91   99    27 0.047   1.95
 2.04 Intr -  57324  57192  133  1  1  -13   42   163 0.057   1.30
 2.03 Intr -  64798  64710   89  0  2   47   94    69 0.163   3.01
 2.02 Intr - 105978 105814  165  2  0   81  105    21 0.022   2.18
 2.01 Init - 114977 114757  221  2  2   86   39   160 0.057   9.01
 2.00 Prom - 117082 117043   40                              -4.96

 3.00 Prom + 118529 118568   40                              -6.86
 3.01 Init + 123341 123426   86  1  2  109   75    45 0.530   5.67
 3.02 Intr + 144068 144185  118  2  1   27   82   136 0.228   7.37
 3.03 Intr + 186037 186225  189  0  0   62   92   127 0.951  10.28
 3.04 Intr + 191994 192087   94  2  1  107    6    50 0.588  -1.76
 3.05 Intr + 193416 193583  168  1  0   95   64   200 0.986  18.22
 3.06 Intr + 198114 198238  125  1  2   59   94    92 0.957   7.20
 3.07 Term + 202279 202302   24  0  0   88   55    27 0.601  -2.38
 3.08 PlyA + 202505 202510    6                               1.05

 4.00 Prom + 205550 205589   40                              -4.26
 4.01 Init + 213926 213992   67  1  1  103   69    76 0.286   6.59
 4.02 Intr + 222168 222229   62  1  2  115   27    88 0.952   3.85
 4.03 Term + 223557 223688  132  2  0   89   41   125 0.945   5.99
 4.04 PlyA + 225215 225220    6                               1.05

 5.00 Prom + 229401 229440   40                              -1.96
 5.01 Init + 233787 233835   49  2  1   80   58    51 0.259   0.41
 5.02 Intr + 238751 238884  134  0  2  104   68   107 0.490  10.66
 5.03 Intr + 255608 255655   48  1  0   60   82    66 0.330   2.08
 5.04 Intr + 256588 256640   53  0  2  111   81    38 0.416   3.11
 5.05 Intr + 257611 257885  275  1  2   91   52    60 0.090  -0.12
 5.06 Intr + 283584 283734  151  1  1  106   69    82 0.810   7.32
 5.07 Intr + 284429 284542  114  2  0  106   51    53 0.269   2.96
 5.08 Term + 287279 287399  121  2  1   48   42   125 0.428   1.85
 5.09 PlyA + 287506 287511    6                               1.05

 6.05 PlyA - 289859 289854    6                               1.05
 6.04 Term - 292995 292553  443  1  2  134   39   389 0.889  34.02
 6.03 Intr - 296162 296019  144  0  0    3   56   126 0.593   1.15
 6.02 Intr - 296539 296450   90  2  0   60   85    41 0.558   0.97
 6.01 Init - 298695 297303 1393  0  1   41   94  2023 0.978 187.02
 6.00 Prom - 304350 304311   40                              -4.76

 7.00 Prom + 304457 304496   40                              -7.36
 7.01 Init + 309241 310315 1075  0  1   70   91  1566 0.990 148.84
 7.02 Intr + 312122 312285  164  0  2   91   76   344 0.705  33.19
 7.03 Term + 312499 312858  360  0  0  127   49   419 0.672  36.44
 7.04 PlyA + 313097 313102    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 158055 158255  201  2  0   80   49   174 0.954   7.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_1|70_aa
MEMEPAGTKCEKQPFIEVALMDGEERKRKPVFPGDHYVHCIIGLVDFAEIHEAVEHNQSA
LVNIHPQNPL

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_1|213_bp
atggagatggaacctgctggaaccaaatgtgaaaaacagccatttatagaggtggccctg
atggatggggaagagagaaagagaaagcctgtgttcccaggggatcattatgttcactgc
atcatcggactggtagattttgcagaaatacatgaagctgttgaacataaccaatctgcc
ctggtgaacattcatcctcagaatcccttgtga

>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_2|301_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRIRIAKSILSQKNKAGGITLPD
FKLYYKATVTKTACVMELHQKSVHYLAYFYCGPASSGLDSPTPPHAFNNEKEEIRGSGGS
LFYHPCLGSLCFKEKQPVMSPQTRQLQKSCHFPGKEVRGLGKISSSNSGQPSSSQQLGRS
TGHADVGPTVVEAPATLMWDQRCCGGWKSETEVSAGLAPSEDCLTLNAAIFSFWSSAEEA
EMHSSAGGKIELDFKCSEDIRITGSLDFQKEKVTIKVIYSKKISISGSLDFHKENETIKV
I

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_2|906_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagaatc
cgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggtatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatgtgtcatggagttacatcag
aaatcggtgcattacttggcatatttttactgtggcccagcaagcagtggcttagacagc
cccacacctcctcatgcatttaacaatgaaaaggaggagataagagggagtggaggcagt
cttttttatcatccgtgcttgggaagtctatgcttcaaggagaaacaaccagtcatgagt
ccccagactcgccagctccaaaaatcttgccacttccctggaaaggaggtgagaggcctt
ggaaagatcagcagctccaacagtggccagccatcctccagccagcaactgggtcgcagc
actggccacgctgacgtggggccaacggtggtggaggcaccggccacgctgatgtgggac
caacggtgctgtggaggctggaagtctgaaactgaggtgtcagcagggctggctccttct
gaggactgtctgactctaaatgcagccatcttctccttctggagctcggctgaagaagca
gagatgcactccagtgctggagggaaaatagaactagacttcaaatgttctgaggacatc
cgtataactgggtcactggacttccaaaaagagaaagtaaccatcaaagtaatatattcc
aagaagatctctatatctgggtcactggacttccacaaagaaaatgaaaccatcaaagta
atataa

>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_3|267_aa
MAPCAGSHDWAASLETCCMPSAFNFEGHRLGLHGSGGEPERALRIGFYFLLPINHGIMPD
KDANDPGNNEARLRIVKTLEDIDLGPTEKCVRVNSVSSGLAEEDLETLLQSRVLPSSLML
PKVESPEEIQWAVCEETLKVGPQVGLFLDAVVFGGEDFRASIGATSSKETLDILYARQKI
VVIAKAFGLQAIDLVYIDFRDGAGLLRQSREGAAMGFTGKQVIHPNQIAVVQEQFSPSPE
KIKWAEELIAAFKEHQQLGKLHKLAKD

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_3|804_bp
atggctccctgtgctggcagccatgattgggctgcttcactggagacatgctgcatgcca
tcagccttcaactttgagggccacaggctggggcttcatggaagtggtggggagcctgaa
cgtgcgctgcggatagggttttacttcctgctacccatcaaccatgggataatgcctgac
aaagatgcgaatgaccccggaaataatgaagctcgactgagaattgtaaaaactcttgaa
gacattgatctgggccctactgaaaaatgtgtgagagtcaactcagtttccagtggtctg
gcggaagaagacctagagacccttttgcaatcccgggtccttccttccagcctgatgcta
ccaaaggtggaaagtcctgaagaaatccagtgggcagtgtgtgaagaaaccctgaaggtc
gggcctcaagtaggtctctttctagatgcagtcgtttttggaggagaagactttcgagcc
agcataggtgcaacaagtagtaaagaaaccctggatattctctacgcccggcaaaagatt
gttgtcatagcgaaagcctttggtctccaagccatagatctggtgtacattgactttcga
gatggagctgggctgcttagacagtcacgagaaggagccgccatgggcttcactggtaag
caggtgattcaccctaaccaaattgccgtggtccaggagcagttttctccttcccctgaa
aaaattaagtgggctgaagaactgattgctgcctttaaagaacatcaacaattaggaaag
cttcacaagttggctaaagactga

>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_4|86_aa
MAGPQIVPVLTTLAFSPILVASGTAGKTVLRDEDFTASDLNLKAPVPPRTLRAGRTPAQG
PCARPGVPPALGSLQPRIRTRATRND

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_4|261_bp
atggcaggccctcagatcgtccctgtgctcaccaccctggccttttctccgattcttgtt
gcatcagggacggctgggaaaacagtcctgcgggatgaagacttcaccgcctccgatttg
aatttgaaagccccagtacccccgcgcaccctgcgcgcaggccggacacctgcgcagggc
ccttgcgcccgccctggggtcccgccggccctggggtccctgcagccccgaatccgcacc
cgagccacgcggaacgactag

>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_5|314_aa
MGFLHVGQAGLELLTSEELALHSSNPGNAQAQRRHLSVILGTVIPGTVIPRTAARASSPP
HTLTKPPMTVATCIRIQDREKWLIHSSHVNQYINQHRKYQAEKAGITLWSLENFHASAQV
PTLCHKQKNQKEKTKVLRLRGALEGKGLLRQGCVQELQQEWELNRKLARKAVAQGRRRRP
SWERSQGPELLLLVFSFLSFIASSFATFLLDPPGWLLPLCPGGALAYSSREEPGPQRNSN
QCATQGARELLARCLDPERVPSALAGAGLGGLNCAKGEQIADKGERFRFSGVVKATPKYS
SYNKFHFKGFLIQR

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_5|945_bp
atggggtttctccatgttggccaggctggtctcgagctcctgacctcagaggaattggcc
ctgcactcttcaaacccaggcaatgctcaagcacagcgcaggcatctctcggtcatcctg
gggacggtcatccccgggacggtcatccccaggacagccgcgagagcctcctctcctccc
cacactctcaccaagccccccatgactgtggccacctgcatcagaatacaggacagggag
aaatggcttattcactccagccatgtaaaccagtacatcaaccagcacaggaagtaccaa
gcagagaaggcaggcatcactttgtggtcactggaaaactttcatgcgtctgcccaggtc
ccaactttatgccacaaacagaagaaccaaaaagagaaaacaaaagttctgaggcttaga
ggtgcactggagggaaagggcctgctgagacaggggtgcgtgcaggagctgcagcaggaa
tgggagctaaaccggaagcttgctaggaaggcggtggcccagggaaggaggaggaggcct
tcttgggaacgaagccaaggcccagagctcctgctgctggttttctcctttctctccttc
atcgcctcttccttcgccactttccttctggaccctccgggctggctcctgcccctctgc
cccggtggcgctctcgcctattcctcccgggaggagccggggccgcagaggaactccaac
cagtgtgccacgcagggtgctcgcgagctcttggcaaggtgcctggatcccgagcgtgtg
cccagtgcactggctggggctgggctgggggggttgaattgcgccaaaggagaacaaatc
gctgacaaaggcgagcgctttcgattcagcggcgtcgttaaggcaaccccaaagtattcc
tcctataataagttccacttcaaagggtttctcattcagcggtga

>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_6|689_aa
MTGFPALAGPPAHSQLRAAVAHLRLRDLGADPGVATTPLGPEHMAQASTLGLSPPSQAFP
AHPEAPAAAARAAALVAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPPPPPPP
PALSGYTTTNSGGGGSSGKGHSRDFVLRRDLSATAPAAAMHGAPLGGEQRSGTGSPQHPA
PPPHSAGMFISASGTYAGPDGSGGPALFPALHDTPGAPGGHPHPLNGQMRLGLAAAAAAA
AAELYGRAEPPFAPRSGDAHYGAVAAAAAAALHGYGAVNLNLNLAAAAAAAAAGPGPHLQ
HHAPPPAPPPPPAPAQHPHQHHPHLPGAAGAFLRYMRQPIKQELICKWIDPDELAGLPPP
PPPPPPPPPPPPAGGAKPCSKTFGTMHELVNHVTVEHVGGPEQSSHVCFWEDCPREGKPF
KAKYKLINHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTVSHSPWRVLELTSAFL
EKVLVVGGPEPPTIDLSALLRPGGSRRVPRSGRGRSGLCGGSSVGVARGGSLGLAPAGRL
MAGEKPFKCEFDGCDRKFANSSDRKKHSHVHTSDKPYYCKIRGCDKSYTHPSSLRKHMKI
HCKSPPPSPGPLGYSSVGTPVGAPLSPVLDPARSHSSTLSPQVTNLNEWYVCQASGAPSH
LHTPSSNGTTSETEDEEIYGNPEVVRTIH

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_6|2070_bp
atgacaggcttcccggcgctggccggcccgcccgcccactcccaactccgggccgccgtc
gcgcacctccgcctgcgggacctgggcgctgaccccggcgtggccaccactccgctcgga
cccgagcacatggcccaggcgagcacgctgggcctcagccctccctcccaggcgttcccg
gcacacccggaggctccggcagccgccgcccgtgctgcagccttggtcgcgcaccccggc
gcgggcagctacccctgcggcgggggcagcagtggcgcgcagccctccgcgcccccgccc
ccagcccctcctcttcctcccaccccttcaccccctccccctcccccgcctcctcctcct
cctgccctctcgggctacaccaccaccaacagtggcggcggcggcagcagcggcaaaggc
cacagcagggacttcgtcctccggagggacctttccgccacggcccccgcggcggccatg
cacggggccccgctcggaggggagcagcggtccggcaccggctccccccagcacccggcc
ccgcctccccactcggccggcatgttcatctccgccagcggcacctacgcgggcccggac
ggcagcggcggcccggcgctcttccccgcgctgcacgacacgccgggggccccaggcggc
cacccgcacccgctcaacggccagatgcgcctggggctggcggcggcagcggcagccgcg
gcggctgagctgtacggccgcgccgaaccgcccttcgcgccgcgctctggggacgcgcac
tacggggcggttgcggccgcagcggcggccgccctgcacggctacggagccgtgaactta
aacctgaacctggcggctgcggcggccgcagcagcggccgggcccgggccccacctgcag
caccacgcgccgcccccggcgccgccgccgccgccggcgcccgcgcagcacccgcaccag
caccacccccacctcccaggggcggctggggccttcctgcgctacatgcggcagccaatc
aagcaggagctcatctgcaagtggatcgaccccgacgagctggccgggctgccgccgccg
ccgccgccgccgccgccgccgccgccaccgcccccggccggcggcgccaagccctgctcc
aaaactttcggcaccatgcacgagctggtgaatcacgtcacggtggagcacgtgggaggc
cccgagcagagcagccacgtctgcttctgggaggactgtccgcgcgagggcaagcccttc
aaggccaaatacaagctcatcaaccacatccgcgtgcacaccggcgagaagccctttccc
tgccctttccccggctgcggcaaggtcttcgcgcgctccgagaacctcaagatccacaag
cgtactcatacagtatcacactcgccctggagggtgctggagttgacatctgcctttcta
gagaaggttctagttgtaggaggacccgagcctcccaccatcgatttatcggcgctgctg
cggccaggaggtagccgccgggtcccacgctcgggccgggggcgctcggggctctgcggg
ggcagcagcgtcggggtggcccgaggcgggagccttggcttggctcctgcgggccgcctg
atggccggggaaaagcctttcaaatgtgaatttgatggctgtgacaggaagtttgccaat
agcagtgatcggaagaaacattcccatgtccacaccagtgacaagccctactactgcaag
attcgaggctgtgacaaatcctacactcacccaagctccctgaggaagcacatgaagatt
cactgcaagtccccgccaccttctccaggaccccttggttactcatcagtggggactcca
gtgggcgcccccttgtcccctgtgctggacccagccaggagtcactccagcactctgtcc
cctcaggtgaccaacctcaatgagtggtacgtttgccaggccagtggggcccccagccac
ctccacaccccttccagcaacggaaccacctctgagactgaagatgaggaaatttacggg
aaccctgaagttgtgcggacgatacattag

>gi568815585f:99672825_99991410|GENSCAN_predicted_peptide_7|532_aa
MLLDAGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDSAAAHMGAF
KLNPGAHELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFNSTRDFL
FRSRGFGDSAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPEQHGPHGSQNVLNGQMR
LGLPGEVFGRSEQYRQVASPRTDPYSAAQLHNQYGPMNMNMGMNMAAAAAHHHHHHHHHP
GAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGGPEQSNH
VCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGE
KPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSPQ
GSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGS
GSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSSNFNEWYV

>gi568815585f:99672825_99991410|GENSCAN_predicted_CDS_7|1599_bp
atgctcctggacgcgggtccgcagttcccggccatcggggtgggcagcttcgcgcgccac
catcaccactccgccgcggcggcggcggcggctgccgccgagatgcaggaccgtgaactg
agcctggcggcggcgcagaacggcttcgttgactccgccgccgcgcacatgggagccttc
aagctcaacccgggcgcgcacgagctgtccccgggccagagctcggcgttcacgtcgcag
ggccccggcgcctaccccggctccgctgcggctgccgctgcggccgcagcgctcgggccc
cacgccgcgcacgttggctcctactctgggccgcccttcaactccacccgggacttcctg
ttccgcagccgcggcttcggggactcggcgccgggcggcgggcagcacgggctgttcggg
ccgggcgcgggcggcctgcaccacgcgcactcggacgcgcagggccacctcctcttcccg
ggcctgccagagcagcacgggccgcacggctcgcagaatgtgctcaacgggcagatgcgc
ctcgggctgcccggcgaggtgttcgggcgctcggagcaataccgccaggtggccagcccg
cggaccgacccctactcggcggcgcaactccacaaccagtacggccccatgaatatgaac
atgggtatgaacatggcagcagccgcggcccaccaccaccaccaccaccaccaccacccc
ggtgcctttttccgctatatgcggcagcagtgcatcaagcaggagctaatctgcaagtgg
atcgaccccgagcaactgagcaatcccaagaagagctgcaacaaaactttcagcaccatg
cacgagctggtgacacacgtctcggtggagcacgtcggcggcccggagcagagcaaccac
gtctgcttctgggaggagtgtccgcgcgagggcaagcccttcaaggccaaatacaaactg
gtcaaccacatccgcgtgcacacaggcgagaaacccttcccctgccccttcccgggctgt
ggcaaagtcttcgcgcgctccgagaacctcaagatccacaaaaggacccacacaggggag
aagccgttccagtgtgagtttgagggctgcgaccggcgcttcgccaacagcagcgacagg
aagaagcacatgcacgtccacacctccgataagccctatctctgcaagatgtgcgacaag
tcctacacgcaccccagctcgctgcggaagcacatgaaggtccatgagtcctccccgcag
ggctctgaatcctccccggccgccagctccggctatgagtcgtccacgcccccggggctg
gtgtcccccagcgccgagccccagagcagctccaacctgtccccagcggcggcggcagcg
gcggcggcggctgcggcggcggcggccgcggtgtccgcggtgcaccggggcggaggctcg
ggcagtggcggcgcgggaggcggctcaggcggcggcagcggcagtggcgggggcggcggc
ggggcgggcggcgggggcggcggcagctctggcgggggcagcgggacagccgggggtcac
agcggcctctcctccaacttcaatgaatggtacgtgtga