GENSCAN 1.0	Date run:  2-Feb-117	Time: 14:40:17

Sequence gi568815597r:53932153_54153188 : 221036 bp : 44.68% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  14297  14397  101  2  2  107   96    60 0.764   8.45
 1.02 Intr +  19834  20241  408  2  0   85   61   387 0.456  29.94
 1.03 Intr +  25012  25036   25  2  1   98   87    42 0.549   2.18
 1.04 Intr +  25997  26128  132  2  0   84   52   120 0.989   7.76
 1.05 Intr +  28204  28322  119  1  2   86  103    22 0.923   3.61
 1.06 Intr +  29882  29970   89  0  2   55  116     7 0.918  -0.11
 1.07 Intr +  30144  30257  114  2  0   82   78    79 0.988   6.94
 1.08 Intr +  30992  31057   66  1  0   68  115    32 0.855   3.00
 1.09 Intr +  34144  34228   85  0  1   48   28    96 0.728  -1.01
 1.10 Term +  35513  35787  275  0  2  109   38   167 0.891   9.43
 1.11 PlyA +  35993  35998    6                               1.05

 2.04 PlyA -  36302  36297    6                               1.05
 2.03 Term -  43312  42914  399  1  0   10   48   426 0.805  25.92
 2.02 Intr -  43915  43754  162  1  0   38   40   156 0.685   5.97
 2.01 Init -  43947  43942    6  0  0   89   83     0 0.797   0.47
 2.00 Prom -  44398  44359   40                              -9.26

 3.00 Prom +  44717  44756   40                              -0.76
 3.01 Sngl +  50454  50657  204  2  0   98   53   232 0.970  13.95
 3.02 PlyA +  50884  50889    6                               1.05

 4.10 PlyA -  51993  51988    6                               1.05
 4.09 Term -  72410  72232  179  0  2   53   37   154 0.790   4.65
 4.08 Intr -  74422  74302  121  1  1   58  116   117 0.998  11.57
 4.07 Intr -  75080  74995   86  0  2   51   84    72 0.039   2.64
 4.06 Intr -  78258  78130  129  1  0  105   91    89 0.975  11.57
 4.05 Intr -  80128  79991  138  2  0   73   78   117 0.852   9.64
 4.04 Intr -  82212  82084  129  1  0   47   71   101 0.842   4.97
 4.03 Intr -  85275  85224   52  0  1  105   98    54 0.973   6.58
 4.02 Intr -  86040  85923  118  2  1  113   94    40 0.921   7.57
 4.01 Init -  96608  96430  179  2  2   49   72   140 0.547   7.23
 4.00 Prom -  98301  98262   40                              -4.36

 5.03 PlyA -  99886  99881    6                               1.05
 5.02 Term - 113634 113551   84  0  0  100   53    67 0.710   2.05
 5.01 Init - 121036 120848  189  1  0   90   97   237 0.993  21.81
 5.00 Prom - 130733 130694   40                              -2.56

 6.00 Prom + 135635 135674   40                              -4.16
 6.01 Init + 150585 150594   10  2  1  105   94     0 0.811   3.05
 6.02 Intr + 156445 156638  194  2  2  113   90   151 0.993  17.01
 6.03 Term + 164133 164321  189  2  0   86   43   174 0.879  10.15
 6.04 PlyA + 168099 168104    6                               1.05

 7.06 PlyA - 169494 169489    6                               1.05
 7.05 Term - 179526 179416  111  0  0   67   42   148 0.897   6.66
 7.04 Intr - 188844 188685  160  2  1  110   72    25 0.146   3.09
 7.03 Intr - 190032 189944   89  0  2   81   81    17 0.149  -0.93
 7.02 Intr - 190317 190150  168  0  0   65   64   128 0.932   8.24
 7.01 Init - 199210 199043  168  1  0   71   38    65 0.237  -0.67
 7.00 Prom - 199751 199712   40                              -0.26

 8.07 PlyA - 200022 200017    6                              -1.75
 8.06 Term - 201199 200816  384  1  0   23   42   552 0.597  38.99
 8.05 Intr - 204656 204478  179  0  2   63   91   345 0.998  31.94
 8.04 Intr - 207954 207601  354  1  0   91   60   638 0.981  56.56
 8.03 Intr - 209281 208946  336  2  0   26   91   536 0.513  43.19
 8.02 Intr - 212661 212314  348  1  0   99   42   502 0.957  42.03
 8.01 Init - 220770 220692   79  0  1   66  102   187 0.998  17.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  75120  74995  126  0  0   74   84    89 0.803   7.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_1|471_aa
XFVPGVLSPSPSAGPREEGAVTEELPLAAPGRGTVATKAMSYYLSSENHLDPGPIYMREN
GQLHMVNLALDGVRSSLQKPRPFRLFPKGFSVELCMNREDDTARKEKTDHFIFTYTREGN
LRYSAKSLFSLVLGFISDNVDHIDSLIGFPEQIAEKLFSAAEARQKFTEPVVILLMEERY
LVISEKLEEIKSFRELTCLDLSCCKLGDEHELLEHLTNEALSSVTQLHLKDNCLSDAGVR
KMTAPVRVMKRGLENLTLLDLSCNPEITDAGIGYLFSFRKLNCLDISGTGLKDIKTVKHK
LQTHIGLVHSKVPLKEFDHSNCKTEGWADQLQAIMQDGRTIHLLDCSVTSPQIVLQWERV
TAEAVKPRETSEPRAAAQRFYGKRSRAEAPLKCPLADTHMNSSEKLQFYKEKAPDCHGPV
LKHEAISSQESKKSKKRPFEESETEQNNSSQPSKQKYVCLAVEDWDLLNSY

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_1|1416_bp
nnctttgtgcccggggtgctgagcccttccccgtcagccgggccgcgggaggagggagcc
gtcaccgaggagctgccgctcgctgccccgggcaggggcacagttgcaaccaaggcaatg
tcttactacctcagctcagaaaaccacctggacccagggcccatctacatgcgagaaaat
gggcagctgcacatggtcaatctggctctggatggtgtcaggagtagcctgcagaagcca
aggcctttcagactgttccccaaaggcttttctgtggagctttgcatgaacagggaagac
gacactgcacggaaagagaagactgatcatttcatcttcacatacacccgagaggggaat
cttcggtactccgccaaatccctcttcagccttgtcctgggtttcatctccgacaatgtg
gatcacattgattcccttattggctttcctgagcagattgctgaaaagctgttctctgct
gctgaagccagacagaaattcactgagccagttgtgatcctgctgatggaagagaggtat
ctcgtgatttcagaaaagcttgaggagattaagtctttccgggagctgacctgcctggat
ctttcctgttgcaagcttggagatgagcatgaacttctagaacatctcaccaatgaagcc
ctgtctagtgtaactcagctccacctgaaggataattgtttatctgatgctggggtgcgg
aagatgacagcaccagttcgagtgatgaaaagaggccttgagaatctaacattattagac
ttatcatgtaaccctgagatcacagatgcaggcattggatacctcttttcttttaggaaa
ctaaactgcttagatatctctgggacagggctcaaggacatcaaaaccgtcaagcacaag
ctccagacccacataggccttgttcactccaaagtgcctttgaaggaatttgatcatagt
aactgcaagacagagggctgggctgaccagctccaagccataatgcaggatggtagaact
atccacctgctggattgtagcgtcacctctccacagatcgttctgcagtgggagcgtgtg
actgcggaagctgtgaagccacgggagacctcggagcctagagcagcagctcagcgcttc
tatgggaagcggtctcgagcagaagccccactgaagtgtcccctggcagacacccacatg
aactcttccgagaaactccagttctataaagagaaagccccagattgccatgggccagtg
ttgaaacacgaagctatctcaagccaggagtcaaagaagagcaagaagagaccttttgag
gagtcagagacagaacagaataactcttcacaaccttcaaagcagaaatatgtatgtctt
gctgtggaagactgggacttgttaaattcctattga

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_2|188_aa
MEPGSGHRRCCQGEEGHDPKEREQLRKPFIGGLSFETTDDGLREHFEKWVTLTDCVRGCG
DGSGNFIVEKTLEVVEVILAVVETLVEEEAMVVEVVAAEIVMEEVMVDIMDLEVMVATMA
AVLVIVVEGAMVVVDQDVETKVVDMVAVVEDMMVTMKEEILAVVTMVVVGTIMILEIIMD
NSNQIKDS

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_2|567_bp
atggagcccggctccggccatcgccgttgctgccagggggaggagggccatgatccaaag
gaacgagagcagttgagaaaaccgtttattggtggtctgagctttgaaactacagatgat
ggtttaagagaacattttgagaaatgggtcacactcacagattgtgtgagaggttgtgga
gatggatctggcaattttattgtggaaaaaactttggaggtggtggaggtaattttggct
gtggtggaaactttggtggaggaggaggctatggtggtggaggtggtggcagcagagata
gttatggaggaggtgatggtggatataatggatttggaggtgatggtggcaactatggcg
gcggtcctggttatagtagtagagggggctatggtcgtggtggaccaggatgtggaaacc
aaggtggtggatatggtggcggtggtggaggatatgatggttacaatgaaggaggaaatt
ttggccgtggtaactatggtggtggtgggaactataatgattttggaaattataatggac
aacagcaatcaaattaaggactcatga

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_3|67_aa
MAPAACGGSFQAAAQGRGAEAEPNRIPELKQQELPGQHTGEEERHRDISGDNAQRENFSG
VLLSMCV

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_3|204_bp
atggctccagctgcctgcgggggaagtttccaggctgcagcacagggaaggggagcagag
gcggagcccaacagaattcctgaattgaagcagcaggagctcccaggacagcatactgga
gaggaggagcggcacagagacatctccggagataatgcgcagagagagaacttcagcgga
gtgctgctcagcatgtgcgtgtga

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_4|376_aa
MTKHRAHRRSCMHYGSTQEDFWEKVIAKLKPGEKGNAKHNIESSVPDSGDTVLKDLEARG
LALVTMQGTRAELSAHSPSRAAGNRRHEQGLPPGESCPQGENGYTAAESKAHPGGEAGGG
HLCCSRRGACLSASLLLLLATVAALIALVTILGLPSCTPGAQACITLTNRTGFLCHDQRS
CIPASGVCDGVRTCTHGEDEDESLCRDVPQSLPHFLVAHCGDPASWIYSDQKCDGTNNCG
DCSDELSPGTWMKLEAIILSKLTQEQKTKHRMFSLISCKQELREPSGILSSDPEPEESSF
PDEEDFGLALEARRISEGQRKFRVGVGSAGRTQSGQPAHKPGAVRGLALGPVAAEDALDF
PAVLAHWRCARFLAGP

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_4|1131_bp
atgaccaagcacagagcacataggaggagctgtatgcattatgggagcacacaggaggac
ttctgggagaaagtgatagccaagcttaaacctggagaaaaagggaacgccaaacacaat
atagagagcagtgtaccagacagtggggacactgtgctcaaagacctagaggccagaggg
ttggccttggtgacaatgcagggaacccgtgctgagctctctgcacacagccccagtcgg
gcagcaggaaaccgaagacatgaacaaggtcttcccccaggtgagagctgtccccaggga
gagaatggctacactgctgctgaatccaaagcccaccctggaggggaagcaggcggcggc
cacctctgctgctcacgtcgcggggcctgcctctctgcctctctgctgctcctcctggca
actgtggcggccctcatcgccttggtcaccattcttggactcccatcatgcaccccagga
gcccaagcttgtataacactgacaaacaggacaggcttcttgtgccatgaccagaggagc
tgcattccagccagtggggtctgtgatggcgttcgcacctgtacccacggcgaggacgag
gatgagagcttgtgccgagatgtgccccagagcctcccccacttccttgtggcccactgt
ggagacccggcctcctggatctactcagaccaaaaatgtgatggcactaacaactgcggg
gactgttcagatgaactgagcccagggacatggatgaagctggaagccatcatcctcagc
aaactaacacaggaacagaaaaccaaacaccgcatgttctcactcataagttgcaagcag
gagctgagagagccctcgggcatccttagttctgaccctgaaccagaggagtcttccttc
ccagacgaggaggactttgggctggctctggaggctagaagaatttccgaaggtcagcgc
aagttccgggtgggcgtgggctcggcgggccgcactcagagcggccagccagcccacaag
cccggggcagtgaggggcttagcacttgggccagtagctgcggaggatgcactggatttc
ccagcagtgctggcccactggcgctgtgctcgatttctcgccgggccttag

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_5|90_aa
MAAPKGSLWVRTQLGLPPLLLLTMALAGGSGTASAEAFDSVLGDTASCHRACQLTYPLHT
YPKHVQKHIPNLMSNMLAILVARISCHSLN

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_5|273_bp
atggcggcgccgaaggggagcctctgggtgaggacccaactggggctcccgccgctgctg
ctgctgaccatggccttggccggaggttcggggaccgcttcggctgaagcatttgactcg
gtcttgggtgatacggcgtcttgccaccgggcctgtcagttgacctaccccttgcacacc
taccctaagcatgtacagaagcatattcccaatctgatgagcaatatgcttgccatcttg
gttgccagaatcagctgccattcgctgaactga

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_6|130_aa
MVTGHTVNKMRKHSDSEVASLAREVYTEWKTFTEKHSNRPSIEVRSDPKTESLRKNAQKL
LSEALELKMDHLLVENIERETFHLCSRLINGPYRRTVRALVFTLKHRAEIRAQVKSGSLP
VGTFVQTHKK

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_6|393_bp
atggtgacaggtcacactgtgaacaagatgcgtaaacactcagattcagaagtggcttct
cttgccagagaagtttacactgagtggaaaactttcactgaaaaacattcaaatagacct
tctattgaagttagaagtgatcccaaaaccgagtcgttgaggaaaaatgctcagaaatta
ctctcagaagccttggaattaaagatggatcacctactggttgaaaatattgaacgggaa
acgtttcatctctgctcccgcctcattaatgggccgtaccggcggacggtgagagccctg
gtcttcacattaaagcaccgagctgaaatccgggctcaggtgaagagcggctcgctgcca
gtcggcacgtttgtacagacccacaaaaagtga

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_7|231_aa
MLPTGIKLKKLWPNYNSLNNPTSIHWIPDFVSVAVAEAPGTQQHTRQMRFLPARRLFSFK
AERDAGRGDPAGVRCPDRTCSSEQPELKFVSRVSVCPLLAFPGVPSYVAGAQSCEGHGRG
SGKGEFKGKVEPQQSGAPDSPRSLIQLCPPTYHHLSSPLLSLSPHCHHQTTQLPPPAMPQ
FRPDHDQATECGALRGCREGYMGELCDGYHHHIFIFIIIKCLGLTREQRGQ

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_7|696_bp
atgctgcccactggcatcaagttaaaaaaactatggcccaattacaattcactcaacaac
ccaacaagcatccactggattccagattttgtgtctgttgctgtggcagaggctccaggc
acacagcagcacacacgccagatgagattcctacctgcaaggcgtttgtttagtttcaag
gcagaaagagatgctgggaggggggaccccgctggtgtcagatgtccagaccggacctgc
agctccgagcagcccgagctcaagtttgtgagccgcgtgtccgtgtgtcccctgctggca
ttcccgggcgttccctcctatgtggctggggcacagagctgtgaggggcacggcaggggt
agtgggaagggagagttcaaggggaaggtggagcctcagcaaagcggggcgcctgacagc
ccaaggtctctcatccagctctgtccgcccacgtaccaccatctctccagtccactcctt
tctctctcgccccactgccaccaccagaccacccagctcccgcctccagccatgccccaa
tttcgtccagaccacgaccaagccacggagtgtggtgcactaaggggttgtcgtgagggt
tacatgggagagctgtgtgatggctaccatcatcacatcttcatcttcatcatcatcaag
tgtttaggcctcacccgggagcaacggggccagtaa

>gi568815597r:53932153_54153188|GENSCAN_predicted_peptide_8|559_aa
MLAEWGACLLLAVALLGPGLQAQAMEGVKCGGVLSAPSGNFSSPNFPRLYPYNTECSWLI
VVAEGSSVLLTFHAFDLEYHDTCSFDFLEIYNGASPDKGNLLGRFCGKVPPPPFTSSWHV
MSVIFHSDKHVASHGFSAGYQKDVCGGVLTGLSGVLTSPEYPNNYPNSMECHWVIRAAGP
AHVKLVFVDFQVEGNEECTYDYVAVLGGPGPTRGHHYCGSTRPPTLVSLGHELQVVFKSD
FNIGGRGFKAYYFSGECQEVYMAMRGNFSSPQYPSSYPNNIRCHWTIRLPPGYQVKVFFL
DLDLEEPNSLTKTCDFDHLAAFDGASEEAPLLGNWCGHHLPPPVTSSHNQLLLLLHTDRS
TTRRGFSVAYIGVVPMNVSCSRTDFQILISTQALAPLERTKVYLGSRSCAAQEVGGNLRI
QARFDTCGTESQGNKFSPSSFRCDEYPVTPQRRNNTSVIVSVLYIDFSAAGREDIHEYEV
RCEPRRKEASVHLLSGSHWLGPYAATAEHLQEAPPMDEAEALEGPVSMVAQDTSDIVFLG
LCILAGILMVIAIVVLMLL

>gi568815597r:53932153_54153188|GENSCAN_predicted_CDS_8|1680_bp
atgctggcagagtggggggcttgcctgctgctggcagtggcactgctgggcccagggctc
caggcccaagccatggaaggtgtcaaatgtgggggtgtgctctcagcaccttctggaaac
ttctccagccccaacttccctagactgtacccctacaacacagagtgcagctggctgatc
gtggtggccgagggatcctcggtgctgctcaccttccatgcctttgacctagagtaccac
gacacctgcagcttcgactttctggagatctacaatggggcctcaccagacaagggcaac
ctgctggggaggttctgcggcaaggtgcccccgccgcccttcacctcctcctggcatgtc
atgtctgtcatcttccactcggacaagcatgtggccagccatggcttttctgcgggctac
cagaaagatgtgtgtggcggcgtcctgactggcctgtcaggggtcctcaccagtcctgag
tatcccaacaactacccgaacagcatggagtgccactgggtgatccgggccgctggccct
gcccacgtcaagctggtgttcgtggacttccaggtggagggcaatgaagagtgcacctat
gactacgtggctgtgcttggggggcctggccccacccgtgggcaccactactgtggcagc
accaggccccccaccctcgtgtctctgggccacgaactgcaggtggtcttcaagtccgac
ttcaacatcggaggccgtggcttcaaggcctactacttctcaggagaatgccaggaggta
tacatggccatgcggggcaacttctccagcccacagtaccccagctcctaccccaacaac
atccgctgccactggaccatccgcctgcccccgggctaccaggtcaaggtgttcttcctg
gacctggacctggaggagcccaacagcctgaccaagacctgtgactttgaccatctggcg
gccttcgatggggccagcgaggaggcacccctgctggggaattggtgtggacaccacctg
ccaccacccgtgacctcaagccacaaccagcttctgcttctgctgcacacagaccgcagc
accacccgcaggggcttctctgtggcctacatcggagtggtgcccatgaacgtgagctgc
tcccgcacggacttccagatcctgatctccacgcaggcgctggccccgctggagcggacc
aaggtctacctgggcagccggagctgtgccgcccaggaggtcggcggcaacctcaggatc
caggcccgctttgatacctgcggcactgagtctcagggaaacaagttcagcccaagctcc
ttcaggtgtgatgagtaccctgtgaccccacagagaagaaacaacacttcagtgattgtc
agcgtgctgtacatcgacttctcagccgcggggcgggaggacatccatgagtacgaggtc
cgctgtgagccacggcgcaaggaggcttctgtccacctgctgtctggctctcactggctg
gggccctatgctgccactgcggagcaccttcaggaagcaccacccatggatgaggcggag
gcactggagggcccagtgagcatggtggcccaggataccagtgacatcgtcttcctgggc
ctttgcatcctggctggaatcctcatggttattgccatcgtggtcttgatgctgctttga