FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2577, 323 aa 1>>>pF1KE2577 323 - 323 aa - 323 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3451+/-0.000801; mu= 11.8569+/- 0.048 mean_var=103.1486+/-20.555, 0's: 0 Z-trim(111.1): 119 B-trim: 42 in 1/49 Lambda= 0.126282 statistics sampled from 11991 (12112) to 11991 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.372), width: 16 Scan time: 2.670 The best scores are: opt bits E(32554) CCDS61469.1 ESR2 gene_id:2100|Hs108|chr14 ( 439) 2230 416.5 2e-116 CCDS61470.1 ESR2 gene_id:2100|Hs108|chr14 ( 474) 2223 415.2 5.1e-116 CCDS55920.1 ESR2 gene_id:2100|Hs108|chr14 ( 481) 2223 415.2 5.2e-116 CCDS32096.1 ESR2 gene_id:2100|Hs108|chr14 ( 495) 2223 415.2 5.3e-116 CCDS9762.1 ESR2 gene_id:2100|Hs108|chr14 ( 530) 2223 415.2 5.6e-116 CCDS5234.1 ESR1 gene_id:2099|Hs108|chr6 ( 595) 601 119.8 5.6e-27 CCDS58061.1 ESRRG gene_id:2104|Hs108|chr1 ( 470) 511 103.3 4e-22 CCDS41667.1 ESRRA gene_id:2101|Hs108|chr11 ( 423) 472 96.2 5e-20 CCDS60830.1 ESRRA gene_id:2101|Hs108|chr11 ( 422) 467 95.2 9.4e-20 CCDS43965.1 AR gene_id:367|Hs108|chrX ( 388) 408 84.5 1.5e-16 CCDS14387.1 AR gene_id:367|Hs108|chrX ( 920) 408 84.7 3e-16 CCDS8310.1 PGR gene_id:5241|Hs108|chr11 ( 933) 407 84.5 3.5e-16 CCDS47298.1 NR3C1 gene_id:2908|Hs108|chr5 ( 742) 399 83.0 7.9e-16 CCDS4278.1 NR3C1 gene_id:2908|Hs108|chr5 ( 777) 399 83.0 8.2e-16 CCDS1517.1 ESRRG gene_id:2104|Hs108|chr1 ( 435) 395 82.1 8.6e-16 CCDS41468.1 ESRRG gene_id:2104|Hs108|chr1 ( 458) 395 82.2 8.9e-16 CCDS9850.2 ESRRB gene_id:2103|Hs108|chr14 ( 508) 394 82.0 1.1e-15 CCDS34258.1 NR3C1 gene_id:2908|Hs108|chr5 ( 778) 387 80.8 3.8e-15 CCDS12352.1 NR2F6 gene_id:2063|Hs108|chr19 ( 404) 359 75.6 7.6e-14 CCDS44584.1 NR1H3 gene_id:10062|Hs108|chr11 ( 387) 353 74.5 1.6e-13 CCDS44585.1 NR1H3 gene_id:10062|Hs108|chr11 ( 402) 353 74.5 1.6e-13 CCDS7929.1 NR1H3 gene_id:10062|Hs108|chr11 ( 447) 353 74.5 1.8e-13 CCDS73285.1 NR1H3 gene_id:10062|Hs108|chr11 ( 453) 353 74.5 1.8e-13 CCDS2201.1 NR4A2 gene_id:4929|Hs108|chr2 ( 598) 350 74.0 3.3e-13 CCDS11366.1 RARA gene_id:5914|Hs108|chr17 ( 462) 342 72.5 7.3e-13 CCDS4768.1 RXRB gene_id:6257|Hs108|chr6 ( 533) 340 72.2 1e-12 CCDS59007.1 RXRB gene_id:6257|Hs108|chr6 ( 537) 340 72.2 1.1e-12 CCDS3772.1 NR3C2 gene_id:4306|Hs108|chr4 ( 984) 343 72.9 1.2e-12 CCDS42317.1 RARA gene_id:5914|Hs108|chr17 ( 457) 334 71.0 2e-12 CCDS6743.1 NR4A3 gene_id:8013|Hs108|chr9 ( 626) 335 71.3 2.2e-12 CCDS6742.1 NR4A3 gene_id:8013|Hs108|chr9 ( 637) 335 71.3 2.3e-12 CCDS8818.1 NR4A1 gene_id:3164|Hs108|chr12 ( 598) 334 71.1 2.5e-12 CCDS55828.1 NR4A1 gene_id:3164|Hs108|chr12 ( 611) 334 71.1 2.5e-12 CCDS54811.1 NR3C2 gene_id:4306|Hs108|chr4 ( 867) 336 71.6 2.6e-12 CCDS73471.1 NR4A1 gene_id:3164|Hs108|chr12 ( 652) 334 71.1 2.6e-12 CCDS69165.1 NR2E1 gene_id:7101|Hs108|chr6 ( 422) 330 70.3 3.1e-12 CCDS72970.1 RXRG gene_id:6258|Hs108|chr1 ( 340) 328 69.9 3.3e-12 CCDS58236.1 RARG gene_id:5916|Hs108|chr12 ( 382) 328 69.9 3.7e-12 CCDS41790.1 RARG gene_id:5916|Hs108|chr12 ( 443) 328 69.9 4.1e-12 CCDS8850.1 RARG gene_id:5916|Hs108|chr12 ( 454) 328 69.9 4.2e-12 CCDS1248.1 RXRG gene_id:6258|Hs108|chr1 ( 463) 328 70.0 4.3e-12 CCDS5063.1 NR2E1 gene_id:7101|Hs108|chr6 ( 385) 324 69.2 6.1e-12 CCDS10177.1 RORA gene_id:6095|Hs108|chr15 ( 523) 323 69.1 8.8e-12 CCDS2642.1 RARB gene_id:5915|Hs108|chr3 ( 448) 322 68.8 8.9e-12 CCDS10375.1 NR2F2 gene_id:7026|Hs108|chr15 ( 414) 318 68.1 1.4e-11 CCDS13331.1 HNF4A gene_id:3172|Hs108|chr20 ( 417) 318 68.1 1.4e-11 CCDS6744.1 NR4A3 gene_id:8013|Hs108|chr9 ( 443) 318 68.1 1.5e-11 CCDS68131.1 HNF4A gene_id:3172|Hs108|chr20 ( 395) 317 67.9 1.5e-11 CCDS46605.1 HNF4A gene_id:3172|Hs108|chr20 ( 464) 318 68.1 1.5e-11 CCDS13330.1 HNF4A gene_id:3172|Hs108|chr20 ( 474) 318 68.1 1.5e-11 >>CCDS61469.1 ESR2 gene_id:2100|Hs108|chr14 (439 aa) initn: 2230 init1: 2230 opt: 2230 Z-score: 2203.7 bits: 416.5 E(32554): 2e-116 Smith-Waterman score: 2230; 100.0% identity (100.0% similar) in 319 aa overlap (1-319:1-319) 10 20 30 40 50 60 pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK 250 260 270 280 290 300 310 320 pF1KE2 LADKELVHMISWAKKIPGMRGNA ::::::::::::::::::: CCDS61 LADKELVHMISWAKKIPGMYPLVTATQDADSSRKLAHLLNAVTDALVWVIAKSGISSQQQ 310 320 330 340 350 360 >>CCDS61470.1 ESR2 gene_id:2100|Hs108|chr14 (474 aa) initn: 2223 init1: 2223 opt: 2223 Z-score: 2196.4 bits: 415.2 E(32554): 5.1e-116 Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK 250 260 270 280 290 300 310 320 pF1KE2 LADKELVHMISWAKKIPGMRGNA :::::::::::::::::: CCDS61 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL 310 320 330 340 350 360 >>CCDS55920.1 ESR2 gene_id:2100|Hs108|chr14 (481 aa) initn: 2223 init1: 2223 opt: 2223 Z-score: 2196.3 bits: 415.2 E(32554): 5.2e-116 Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK 250 260 270 280 290 300 310 320 pF1KE2 LADKELVHMISWAKKIPGMRGNA :::::::::::::::::: CCDS55 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL 310 320 330 340 350 360 >>CCDS32096.1 ESR2 gene_id:2100|Hs108|chr14 (495 aa) initn: 2223 init1: 2223 opt: 2223 Z-score: 2196.1 bits: 415.2 E(32554): 5.3e-116 Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK 250 260 270 280 290 300 310 320 pF1KE2 LADKELVHMISWAKKIPGMRGNA :::::::::::::::::: CCDS32 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL 310 320 330 340 350 360 >>CCDS9762.1 ESR2 gene_id:2100|Hs108|chr14 (530 aa) initn: 2223 init1: 2223 opt: 2223 Z-score: 2195.7 bits: 415.2 E(32554): 5.6e-116 Smith-Waterman score: 2223; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 MDIKNSPSSLNSPSSYNCSQSILPLEHGSIYIPSSYVDSHHEYPAMTFYSPAVMNYSIPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 NVTNLEGGPGRQTTSPNVLWPTPGHLSPLVVHRQLSHLYAEPQKSPWCEARSLEHTLPVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 RETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 NDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQLH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 CAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVLISRPSAPFTEASMMMSLTK 250 260 270 280 290 300 310 320 pF1KE2 LADKELVHMISWAKKIPGMRGNA :::::::::::::::::: CCDS97 LADKELVHMISWAKKIPGFVELSLFDQVRLLESCWMEVLMMGLMWRSIDHPGKLIFAPDL 310 320 330 340 350 360 >>CCDS5234.1 ESR1 gene_id:2099|Hs108|chr6 (595 aa) initn: 810 init1: 569 opt: 601 Z-score: 597.9 bits: 119.8 E(32554): 5.6e-27 Smith-Waterman score: 806; 44.3% identity (64.9% similar) in 345 aa overlap (17-318:27-366) 10 20 30 40 pF1KE2 MDIKNSPSSLNSPSSYNCSQSILPLEH--GSIYIPSSY--VDSHHEYPAM : : .:::. : .:. :: : .. : :. CCDS52 MTMTLHTKASGMALLHQIQGNELEPLNRPQLKIPLERPLGEVYLDSSKPAVYNYPEGAAY 10 20 30 40 50 60 50 60 70 80 pF1KE2 TFYSPAVMNYSIPSNVTNLEGGPGRQ------------------TTSPNVLWPTPGHLSP : . :. : .. .. :.: ::: . . :: .: : .::: CCDS52 EFNAAAAANAQVYGQ-TGLPYGPGSEAAAFGSNGLGGFPPLNSVSPSPLMLLHPPPQLSP 70 80 90 100 110 90 100 110 120 130 140 pF1KE2 LVV-HRQLSHLYAEPQKSPWC--EARSLEHTLPVNRETLKRKVSGNRCASPVTGPGS--- .. : : : : . : . :: : : .. .:. . .: :: .. :: CCDS52 FLQPHGQQVPYYLENEPSGYTVREAGPPAFYRP-NSDN-RRQGGRERLAS-TNDKGSMAM 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE2 --KRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATNQCTIDKNRRKS .....::::.::::::::::::::::::::::::::::::.:::::::::::::::: CCDS52 ESAKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKS 180 190 200 210 220 230 210 220 230 240 250 pF1KE2 CQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADE-----QLHCAGKAKRSG-GHAPR ::::::::::::::.: : :..: : :.....:. :. .. :: . .. .: CCDS52 CQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGRGEVGSAGDMRAANLWPSPL 240 250 260 270 280 290 260 270 280 290 300 pF1KE2 V-----RELLLDALSPEQLVLTLLEAEPPHVLISR--PSAPFTEASMMMSLTKLADKELV . .. : .:. .:.: .::.:::: .: :. :. ::.::::: ::.:::.::: CCDS52 MIKRSKKNSLALSLTADQMVSALLDAEPP-ILYSEYDPTRPFSEASMMGLLTNLADRELV 300 310 320 330 340 350 310 320 pF1KE2 HMISWAKKIPGMRGNA :::.:::..:: CCDS52 HMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQG 360 370 380 390 400 410 >>CCDS58061.1 ESRRG gene_id:2104|Hs108|chr1 (470 aa) initn: 518 init1: 377 opt: 511 Z-score: 510.7 bits: 103.3 E(32554): 4e-22 Smith-Waterman score: 511; 46.6% identity (69.5% similar) in 174 aa overlap (148-318:132-300) 120 130 140 150 160 170 pF1KE2 PVNRETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSI .: ::.: :::::::: :::.:::::::.: CCDS58 VRKLYDDCSSTIVEDPQTKCEYMLNSMPKRLCLVCGDIASGYHYGVASCEACKAFFKRTI 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 QGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSR--RERCGYRLVRRQRSA ::. .: :::::.: : : :::::::::. :: .:::.: : : : : : . .:. .: CCDS58 QGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDA 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 DEQLHCAGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVL-ISRPSAPFTEASM ... . . . : . :: . . ...: :: ::: .. . :..: .. . CCDS58 ENSPYLNPQLVQ-----PAKKPLLWSDPADNKIVSHLLVAEPEKIYAMPDPTVPDSDIKA 230 240 250 260 270 300 310 320 pF1KE2 MMSLTKLADKELVHMISWAKKIPGMRGNA . .: :::.::: .:.:::.::: CCDS58 LTTLCDLADRELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDEL 280 290 300 310 320 330 >>CCDS41667.1 ESRRA gene_id:2101|Hs108|chr11 (423 aa) initn: 409 init1: 409 opt: 472 Z-score: 473.0 bits: 96.2 E(32554): 5e-20 Smith-Waterman score: 472; 46.1% identity (62.9% similar) in 178 aa overlap (148-318:78-248) 120 130 140 150 160 170 pF1KE2 PVNRETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSI .: ::.: :::::::: :::.:::::::.: CCDS41 PGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTI 50 60 70 80 90 100 180 190 200 210 220 230 pF1KE2 QGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERC-GYRLVRRQRSAD :: .: :::.:.: : : :::.:::::. :: .:::.: : : .: : : ..: CCDS41 QGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEV 110 120 130 140 150 160 240 250 260 270 280 290 pF1KE2 EQLHC-----AGKAKRSGGHAPRVRELLLDALSPEQLVLTLLEAEPPHVL-ISRPSAPFT . : :: .:: :: ..:: : :: .:: .. . :..: CCDS41 DPLPFPGPFPAGPLAVAGG--PRKTAAPVNAL-----VSHLLVVEPEKLYAMPDPAGPDG 170 180 190 200 210 220 300 310 320 pF1KE2 EASMMMSLTKLADKELVHMISWAKKIPGMRGNA . . .: : :.:.: :::::.::: CCDS41 HLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPL 230 240 250 260 270 280 >>CCDS60830.1 ESRRA gene_id:2101|Hs108|chr11 (422 aa) initn: 440 init1: 368 opt: 467 Z-score: 468.1 bits: 95.2 E(32554): 9.4e-20 Smith-Waterman score: 467; 45.8% identity (62.6% similar) in 179 aa overlap (148-318:78-247) 120 130 140 150 160 170 pF1KE2 PVNRETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSI .: ::.: :::::::: :::.:::::::.: CCDS60 PGHKEEEDGEGAGPGEQGGGKLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTI 50 60 70 80 90 100 180 190 200 210 220 230 pF1KE2 QGHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERC-GYRLVRRQRSAD :: .: :::.:.: : : :::.:::::. :: .:::.: : : .: : : ..: CCDS60 QGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEV 110 120 130 140 150 160 240 250 260 270 280 pF1KE2 EQLHC-----AGKAKRSGGHAPRVRELLLDALSP-EQLVLTLLEAEPPHVL-ISRPSAPF . : :: .:: :: .: . :: :: .:: .. . :..: CCDS60 DPLPFPGPFPAGPLAVAGG--PR-------KTAPVNALVSHLLVVEPEKLYAMPDPAGPD 170 180 190 200 210 290 300 310 320 pF1KE2 TEASMMMSLTKLADKELVHMISWAKKIPGMRGNA . . .: : :.:.: :::::.::: CCDS60 GHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLP 220 230 240 250 260 270 >>CCDS43965.1 AR gene_id:367|Hs108|chrX (388 aa) initn: 404 init1: 318 opt: 408 Z-score: 410.5 bits: 84.5 E(32554): 1.5e-16 Smith-Waterman score: 419; 36.5% identity (69.1% similar) in 178 aa overlap (149-320:28-195) 120 130 140 150 160 170 pF1KE2 VNRETLKRKVSGNRCASPVTGPGSKRDAHFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQ : .:.: ::: :::. .: .::.::::. . CCDS43 MILWLHSLETARDHVLPIDYYFPPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAE 10 20 30 40 50 180 190 200 210 220 230 pF1KE2 GHNDYICPATNQCTIDKNRRKSCQACRLRKCYEVGMVKCGSRRERCGYRLVRRQRSADEQ :.. :.: . :.::::: :::.: .::::::::.::. :.:. . . .. . CCDS43 GKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMT-LGARKLK---------KLGNLK 60 70 80 90 100 240 250 260 270 280 290 pF1KE2 LHCAGKAKRSGGHAPRVRELL----LDALSPEQLVLTLLEAEPPHVLIS--RPSAPFTEA :. :.:. . . . .. . : ... . . :..::: : :. . . : . : CCDS43 LQEEGEASSTTSPTEETTQKLTVSHIEGYECQPIFLNVLEAIEPGVVCAGHDNNQPDSFA 110 120 130 140 150 160 300 310 320 pF1KE2 SMMMSLTKLADKELVHMISWAKKIPGMRGNA ... ::..:....:::...::: .::.: CCDS43 ALLSSLNELGERQLVHVVKWAKALPGFRNLHVDDQMAVIQYSWMGLMVFAMGWRSFTNVN 170 180 190 200 210 220 323 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 18:09:37 2016 done: Fri Nov 4 18:09:38 2016 Total Scan time: 2.670 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]