GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:16:25

Sequence gi568815578r:37154209_37356889 : 202681 bp : 47.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -    959    855  105  2  0   98  105    83 0.594  11.41
 1.08 Intr -   3747   3652   96  0  0   81   92    15 0.706   1.41
 1.07 Intr -   4828   4684  145  0  1   52   78    83 0.954   3.98
 1.06 Intr -   5968   5889   80  1  2  136   64    78 0.977   8.55
 1.05 Intr -   7458   7421   38  1  2   83  100    29 0.698   1.58
 1.04 Intr -  13332  13249   84  1  0   50   70    77 0.568   1.89
 1.03 Intr -  17849  17715  135  0  0   28   89   124 0.843   7.04
 1.02 Intr -  19908  19787  122  2  2  112   98    88 0.994  12.34
 1.01 Init -  20078  20062   17  2  2   53   88   -26 0.076  -6.22
 1.00 Prom -  23619  23580   40                              -5.66

 2.00 Prom +  23749  23788   40                              -8.16
 2.01 Init +  24030  24043   14  2  2   72   66    12 0.086  -4.19
 2.02 Intr +  25044  25161  118  0  1   73   76   139 0.121  11.67
 2.03 Intr +  25267  25357   91  0  1   44   -5    94 0.085  -4.73
 2.04 Intr +  29972  30165  194  0  2   47  116   216 0.869  19.51
 2.05 Intr +  44189  44284   96  1  0   53  105    71 0.957   5.51
 2.06 Intr +  44842  45017  176  0  2   99   69   124 0.987  10.34
 2.07 Intr +  49677  49752   76  0  1   90   48    76 0.996   3.32
 2.08 Intr +  50559  50693  135  2  0   79   67   135 0.942  11.26
 2.09 Intr +  53065  53241  177  0  0   53   94   261 0.885  23.32
 2.10 Intr +  55839  55957  119  2  2   80  110    44 0.937   5.06
 2.11 Intr +  59552  59657  106  2  1   77   92   131 0.989  12.62
 2.12 Intr +  69670  69761   92  0  2   98   94    97 0.995  10.09
 2.13 Intr +  71480  71594  115  2  1   81   71   145 0.986  12.55
 2.14 Intr +  74342  74536  195  1  0   39   68   201 0.914  12.81
 2.15 Intr +  75765  75851   87  2  0   98   76    75 0.954   7.47
 2.16 Intr +  78088  78183   96  0  0   72  105    85 0.935   8.81
 2.17 Intr +  79812  79887   76  2  1   67  119    60 0.999   6.09
 2.18 Intr +  82372  82501  130  2  1   81   94   184 0.914  18.05
 2.19 Term +  85405  85486   82  1  1  117   38    13 0.278  -3.63
 2.20 PlyA +  87389  87394    6                               1.05

 3.12 PlyA -  88660  88655    6                               1.05
 3.11 Term -  88801  88772   30  1  0  103   39    37 0.264  -1.85
 3.10 Intr -  89523  89385  139  2  1   97   19    96 0.227   4.07
 3.09 Intr - 100121 100002  120  1  0   54   80    95 0.635   4.91
 3.08 Intr - 102290 102186  105  1  0  106   86   218 0.990  22.73
 3.07 Intr - 102461 102406   56  2  2   73   84   -27 0.421  -6.82
 3.06 Intr - 102700 102599  102  1  0  129  115     8 0.513   7.97
 3.05 Intr - 107464 107416   49  0  1   13  105    60 0.205  -1.12
 3.04 Intr - 107647 107535  113  1  2   18   94   125 0.479   5.28
 3.03 Intr - 122033 121950   84  2  0    7  111    66 0.086   0.82
 3.02 Intr - 125905 125883   23  2  2   46  102    36 0.030  -1.94
 3.01 Init - 132462 132309  154  0  1  101   45   113 0.437   8.44
 3.00 Prom - 137575 137536   40                              -4.26

 4.00 Prom + 139284 139323   40                              -3.26
 4.01 Init + 147056 147205  150  1  0   92  101   233 0.996  25.04
 4.02 Intr + 159628 159721   94  0  1   19   37   134 0.019   0.94
 4.03 Intr + 162297 162462  166  1  1   77   58    45 0.048  -0.58
 4.04 Intr + 174009 174145  137  0  2   85   94    38 0.369   4.31
 4.05 Intr + 179601 179681   81  1  0   72   96    45 0.828   3.31
 4.06 Term + 179799 179941  143  1  2   52   47   117 0.840   2.09
 4.07 PlyA + 181025 181030    6                               1.05

 5.05 PlyA - 181114 181109    6                               1.05
 5.04 Term - 182115 182071   45  0  0   91   53    37 0.137  -2.29
 5.03 Intr - 189120 189031   90  0  0   49  101    80 0.317   5.59
 5.02 Intr - 199861 199757  105  1  0  125   14    35 0.194   0.21
 5.01 Intr - 202251 201972  280  2  1   99  131    70 0.607   9.88

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:37154209_37356889|GENSCAN_predicted_peptide_1|274_aa
MKKIRRICSQEEVVIPCAYDSDSESVDLELSNLEIIKKGSSSIELTDLDIPDIPGLHCEP
LSHSPRHLTQQDPLSEAIVEKLIQSIQKVFNVPDSSRNCLGNLGYKDKEDKIPIYAAKQG
KRNPLEAAETQKVLVQEERPHSLSSSMRQEVFVTIADLSYQDVHLLLGSEDRAELFSLTI
KSIITLPSVRTLTQIQEIMPNGTCNTECLYRQTFQAFSEMLQSLVVKDPHLENLDTIIKH
LVPWLQSVKDHERERATASMAQVLKCLSKHLNLK

>gi568815578r:37154209_37356889|GENSCAN_predicted_CDS_1|822_bp
atgaaaaaaataagaaggatctgtagtcaggaagaagtagtgatcccctgtgcctatgac
agtgattcagaaagtgtggatttggagctgagcaacttagagattattaaaaaaggctca
agtagcattgaactgacagacttggacatccctgacatccctggactccattgtgagccc
ctgtcacatagccccagacacctgacccaacaggacccgctcagtgaggccattgttgag
aaactgatccagtccatccagaaggttttcaatgtgcctgacagttccaggaactgtctt
gggaatttgggctacaaagacaaagaagacaaaatccctatttatgcagccaagcaaggt
aagagaaatcctctagaagcagctgaaacacaaaaggtactggtacaagaggaacgcccg
cattctctgtccagttccatgcgccaggaggtctttgtcaccatcgctgatctcagttac
caagatgtccatttgctgttgggctctgaagatcgagctgagttgttcagtcttaccatc
aagagtataatcactctgccctctgtaaggacccttacccagatacaggaaatcatgccc
aatgggacctgcaacacagagtgtctttacaggcagacgtttcaggcattctctgagatg
ctccagagtttggtggtaaaagacccacatttggaaaatcttgacaccattattaagcac
ttggtcccctggttacagtcagtcaaagaccatgagcgggaacgggccacggccagcatg
gctcaagttctgaagtgcctatccaaacatctcaacttgaag

>gi568815578r:37154209_37356889|GENSCAN_predicted_peptide_2|724_aa
MSRLQACRESLASPVAGSWSHFPERKSARGSDSGGTCSEEWRRRGHGHKLWLGRSRIEGP
KEGCELVGVPATWRGSSTVFLLALTIIASTWALTPTHYLTKHDVERLKASLDRPFTNLES
AFYSIVGLSSLGAQVPDAKKACTYIRSNLDPSNVDSLFYAAQASQALSGCEISISNETKD
LLLAAVSEDSSVTQIYHAVAALSGFGLPLASQEALSALTARLSKEETVLATVQALQTASH
LSQQADLRSIVEEIEDLVARLDELGGVYLQFEEGLETTALFVAATYKLMDHVGTEPSIKE
DQVIQLMNAIFSKKNFESLSEAFSVASAAAVLSHNRYHVPVVVVPEGSASDTHEQAILRL
QVTNVLSQPLTQATVKLEHAKSVASRATVLQKTSFTPVGDVFELNFMNVKFSSGYYDFLV
EVEGDNRYIANTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGTFIADS
HQNFALFFQLVDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDNKNVYKFELDTSERKI
EFDSASGTYTLYLIIGDATLKNPILWNVADVVIKFPEEEAPSTVLSQNLFTPKQEIQHLF
REPEKRPPTVVSNTFTALILSPLLLLFALWIRIGANVSNFTFAPSTIIFHLGHAAMLGLM
YVYWTQLNMFQTLKYLAILGSVTFLAGNRMLAQQAVKRFNGVVIYLQKNVPFLVYNSVNP
EKPL

>gi568815578r:37154209_37356889|GENSCAN_predicted_CDS_2|2175_bp
atgtcgaggctgcaagcctgccgcgagtccctggcgtcccctgtggcgggctcttggagc
cactttcccgagcggaagtcagcccgcggctcggactccggcgggacctgctcggaggaa
tggcgccgccgggggcatgggcacaagctctggctggggcgctctcggatcgagggtccg
aaggagggctgcgagctggtgggagtgcccgcgacctggcggggttcaagcactgtcttc
ctgttggccctgacaatcatagccagcacctgggctctgacgcccactcactacctcacc
aagcatgacgtggagagactaaaagcctcgctggatcgccctttcacaaatttggaatct
gccttctactccatcgtgggactcagcagccttggtgctcaggtgccagatgcaaagaaa
gcatgtacctacatcagatctaaccttgatcccagcaatgtggattccctcttctacgct
gcccaggccagccaggccctctcaggatgtgagatctctatttcaaatgagaccaaagat
ctgcttctggcagctgtcagtgaggactcatctgttacccagatctaccatgcagttgca
gctctaagtggctttggccttcccttggcatcccaagaagcactcagtgcccttactgct
cgtctcagcaaggaggagactgtgctggcaacagtccaggctctgcagacagcatcccac
ctgtcccagcaggctgacctgaggagcatcgtggaggagattgaggaccttgttgctcgc
ctggatgaactcgggggcgtgtatctccagtttgaagaaggactggaaacaacagcgtta
tttgtggctgccacctacaagctcatggatcatgtggggactgagccatccattaaggag
gatcaggtcatccagctgatgaacgcgatcttcagcaagaagaactttgagtccctctcc
gaagccttcagcgtggcctctgcagctgctgtgctctcgcataatcgctaccacgtgcca
gttgtggttgtgcctgagggctctgcttccgacactcatgaacaggctatcttgcggttg
caagtcaccaatgttctgtctcagcctctgactcaggccactgttaaactagaacatgct
aaatctgttgcttccagagccactgtcctccagaagacatccttcacccctgtaggggat
gtttttgaactaaatttcatgaacgtcaaattttccagtggttattatgacttccttgtc
gaagttgaaggtgacaaccggtatattgcaaataccgtagagctcagagtcaagatctcc
actgaagttggcatcacaaatgttgatctttccaccgtggataaggatcagagcattgca
cccaaaactacccgggtgacatacccagccaaagccaagggcacattcatcgcagacagc
caccagaacttcgccttgttcttccagctggtagatgtgaacactggtgctgaactcact
cctcaccagacatttgtccgactccataaccagaagactggccaggaagtggtgtttgtt
gccgagccagacaacaagaacgtgtacaagtttgaactggatacctctgaaagaaagatt
gaatttgactctgcctctggcacctacactctctacttaatcattggagatgccactttg
aagaacccaatcctctggaatgtggctgatgtggtcatcaagttccctgaggaagaagct
ccctcgactgtcttgtcccagaaccttttcactccaaaacaggaaattcagcacctgttc
cgcgagcctgagaagaggccccccaccgtggtgtccaatacattcactgccctgatcctc
tcgccgttgcttctgctcttcgctctgtggatccggattggtgccaatgtctccaacttc
acttttgctcctagcacgattatatttcacctgggacatgctgctatgctgggactcatg
tatgtctactggactcagctcaacatgttccagaccttgaagtacctggccatcctgggc
agtgtgacgtttctggctggcaatcggatgctggcccagcaggcagtcaagaggtttaat
ggagttgtaatttatctgcagaaaaatgtaccctttttagtgtacaattctgtgaatcct
gaaaaacctctgtag

>gi568815578r:37154209_37356889|GENSCAN_predicted_peptide_3|324_aa
MDTDAHIERTSCEDEGRYRDDASTAKEHHRLPAGHQKLVKRHGTGSSQPSEGEHNVGGKV
FTESENSTLKGNDEVLWSNTLTLQTAQENEEINDGNARRLPEQTPSPGPLDLSSASEQRD
ICRIRNTESKRPTAILFAHGLVPPRVKDATLGVLLCDPHPQQQLPLLPTSPFDPQRRQTQ
LHRGHSEGSESLLGMRRYADAIFTNSYRKVLGQLSARKLLQDIMSRQQGESNQERGARAR
LGRQVDSMWAEQKQMELESILVALLQKHSHWLSFVPSDQDTQQPLYFHPQALLPLLHTTV
HQPRTQSVFQARTGLDPIQNGIEF

>gi568815578r:37154209_37356889|GENSCAN_predicted_CDS_3|975_bp
atggacacagatgcacacatagagagaacgtcatgtgaagatgaaggcagatatcgggac
gatgcctctacagccaaggaacaccacagattgccagcaggccaccagaagctagtcaag
aggcatgggacaggctcctcacagccctcagaaggagagcacaacgtgggcggtaaggta
ttcactgaatcagagaactcgactcttaaaggaaatgatgaggtcttatggtctaatacc
ctcactttacagacagctcaggaaaatgaagagataaatgatgggaacgccaggcggctg
ccagagcaaacacccagcccagggcccctggatttgagcagtgcctcggagcagagggat
atctgccgcatcagaaacactgagtccaagaggcccaccgccatcctctttgcccatgga
ctggtgccaccccgggtgaaggatgccactctgggtgttcttctttgtgatcctcaccct
cagcaacagctcccactgctccccacctccccctttgaccctcagaggaggcagacacag
cttcacagaggtcactcagaggggtctgagtctctcttggggatgcggcggtatgcagat
gccatcttcaccaacagctaccggaaggtgctgggccagctgtccgcccgcaagctgctc
caggacatcatgagcaggcagcagggagagagcaaccaagagcgaggagcaagggcacgg
cttggtcgtcaggtagacagcatgtgggcagaacaaaagcaaatggaattggagagcatc
ctggtggccctgctgcagaagcacagccactggctgtcctttgttcccagtgaccaggac
acccagcagcctttgtacttccaccctcaggccctactacccctgctccacaccactgtc
caccagccccgcacccagtctgtcttccaggcccgcacaggtctggatcccattcagaac
ggcatagagttctag

>gi568815578r:37154209_37356889|GENSCAN_predicted_peptide_4|256_aa
MASDLDFSPPEVPEPTFLENLLRYGLFLGAIFQLICVLAIIVPIPKSHEAGQTMGAVCRV
AKETGIPVDEGDQRKLWGLTQCSGSEEAVTPYDRRDLDSRNSPQAPAGQSTTSSSFCFCD
GLESRGLKHTVSIDCIRDPESLLLCSHLVETPNLKCGTLLLKPEKDPGLWPLAKAQAVQF
SSAQAQCKGASLPHYPLLPYPGNVCGRRKGAKCTTDVTEHPQQVPPEGPAQSGCGKAKCM
TSRLEDFGPQEPWAVD

>gi568815578r:37154209_37356889|GENSCAN_predicted_CDS_4|771_bp
atggcctctgacctagacttctcacctccggaggtgcccgagcccactttcctggagaac
ctgctacggtacggactcttcctgggagccatcttccagctcatctgtgtgctggccatc
atcgtacccattcccaagtcccacgaggcgggccaaaccatgggagcagtttgccgggtg
gccaaggaaacaggtattcctgttgatgaaggtgaccagcggaagctctggggcctgact
cagtgctcagggtctgaggaggctgtgacgccctatgaccgcagagatctagacagtcgt
aacagtccccaggctccagctgggcaatccaccacttcctcttccttctgcttctgtgac
ggtttagagtcaagggggctgaaacacactgtgagcatagactgtattagggatcctgag
tctttgctcctatgtagtcacttggtagaaacgccgaacctgaaatgtggcactttgctt
ctcaagccagagaaggatccaggcttatggcccttagcaaaagcccaagcggttcagttc
agctcagcccaggcccagtgcaaaggagcctcccttcctcattacccgcttctgccctac
cccgggaacgtgtgtggacgtagaaagggtgcaaaatgcacaacggatgtcacagagcat
ccccagcaggtgcccccagagggaccagcccagagcgggtgcggaaaggccaagtgcatg
accagccgccttgaggactttggcccccaggaaccttgggctgtggactag

>gi568815578r:37154209_37356889|GENSCAN_predicted_peptide_5|173_aa
XPICSQCGHQGHLTEATLTLTQTLPRMWDTLLSSSSPSSLPEEQAPRPSTHWHQPTDPSQ
DSMAPQTSKRSCSQGTFRPFVKLYLPSEVPPILPVNTNCNKITRTEHLLCAGIAEGVGHK
TSSLQQAHGASLRTPTGTTSQPKSTQQMIDAIDVNIAEMACMSAPVLELGTDK

>gi568815578r:37154209_37356889|GENSCAN_predicted_CDS_5|522_bp
nngcccatctgttctcagtgcggccaccagggccacctcactgaagccacactgaccctg
acccagacactacccagaatgtgggatacattactctcatccagtagcccttcctcactg
cccgaggagcaggcccccaggccctctacccattggcaccagccaactgacccaagtcaa
gactccatggctcctcagacctccaagaggagctgctcacagggcaccttcaggcccttt
gtcaagctctatctcccctcagaggtccctcccatccttccggttaatacaaattgcaat
aaaataacacgcaccgagcacttactgtgtgctggcattgctgagggcgttggacacaag
acttcatccttgcaacaagcccatggagccagtcttagaacaccaacaggaaccacttcc
caacccaaaagcacccagcagatgatagatgctattgacgtcaacattgctgagatggcc
tgcatgtcagctcctgtgctggagctggggacagacaagtga