GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:51:56

Sequence gi568815597r:8941624_9158251 : 216628 bp : 48.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2525   2564   40                              -1.76
 1.01 Init +   4264   4342   79  0  1   96   99   164 0.928  17.54
 1.02 Intr +   7640   7819  180  0  0   80  110   156 0.931  16.84
 1.03 Intr +  15514  15662  149  2  2  102   67   177 0.916  16.95
 1.04 Intr +  17287  17379   93  0  0  114   99    99 0.996  13.76
 1.05 Intr +  20964  21033   70  2  1  132  110    83 0.998  13.65
 1.06 Intr +  26036  26193  158  0  2   99   95    93 0.949  10.83
 1.07 Intr +  29244  29358  115  2  1   99   96   142 0.965  16.12
 1.08 Intr +  40431  40546  116  1  2   36   74    90 0.088   2.57
 1.09 Intr +  43787  43925  139  1  1   95   -1    58 0.367  -2.36
 1.10 Term +  50027  50217  191  0  2   86   36   129 0.674   5.11
 1.11 PlyA +  51336  51341    6                               1.05

 2.13 PlyA -  52012  52007    6                               1.05
 2.12 Term -  61895  61677  219  2  0  103   40   235 0.820  17.24
 2.11 Intr -  63256  63129  128  2  2  131  109   109 0.997  17.70
 2.10 Intr -  65762  65687   76  2  1  113   81   138 0.915  14.69
 2.09 Intr -  68621  68520  102  2  0  123   41   215 0.926  20.67
 2.08 Intr -  72012  71902  111  0  0   94  109   168 0.998  20.08
 2.07 Intr -  73245  73058  188  1  2   88   80   326 0.994  31.21
 2.06 Intr -  73619  73494  126  0  0   90   86   185 0.980  19.15
 2.05 Intr -  76752  76600  153  1  0   82   91   165 0.999  16.24
 2.04 Intr -  77710  77586  125  0  2   90   82   222 0.999  22.03
 2.03 Intr -  81480  81295  186  2  0   41   97    94 0.587   4.40
 2.02 Intr -  83451  83342  110  0  2   63   86   177 0.565  14.08
 2.01 Init -  84722  84672   51  2  0   80   98    -5 0.737   0.86
 2.00 Prom -  89769  89730   40                              -3.96

 3.15 PlyA -  91606  91601    6                               1.05
 3.14 Term -  96166  95963  204  1  0  107   41   335 0.997  28.07
 3.13 Intr -  96401  96274  128  0  2   99  109   166 0.999  20.20
 3.12 Intr -  96883  96808   76  1  1  112   62   114 0.780  10.29
 3.11 Intr -  97045  96953   93  1  0   45   52    79 0.392   0.16
 3.10 Intr -  97306  97205  102  1  0   97   94   114 0.999  13.27
 3.09 Intr -  98039  97929  111  2  0   88   78   351 0.841  34.68
 3.08 Intr -  98364  98177  188  1  2   76    6   486 0.629  38.61
 3.07 Intr -  98566  98441  126  2  0   74   92   221 0.977  21.75
 3.06 Intr - 100314 100162  153  1  0   97  101   202 0.998  22.44
 3.05 Intr - 106111 105987  125  0  2  110   97   -32 0.393   0.13
 3.04 Intr - 107647 107477  171  0  0   40   61    95 0.084   1.06
 3.03 Intr - 115985 115825  161  2  2   79  110    49 0.212   4.99
 3.02 Intr - 116627 116529   99  2  0   76   82   119 0.177  10.41
 3.01 Init - 130169 130050  120  2  0  100   51   145 0.062  10.19
 3.00 Prom - 134771 134732   40                              -2.16

 4.06 PlyA - 135024 135019    6                               1.05
 4.05 Term - 162621 162476  146  1  2   76   55    96 0.602   3.17
 4.04 Intr - 163821 163656  166  0  1   93   65   -11 0.266  -3.37
 4.03 Intr - 164057 163863  195  2  0   71   53   405 0.783  34.91
 4.02 Intr - 169866 169653  214  2  1  130   66   379 0.534  38.62
 4.01 Init - 187404 187022  383  0  2   85   94   685 0.903  64.14
 4.00 Prom - 195225 195186   40                              -3.06

 5.05 PlyA - 195273 195268    6                               1.05
 5.04 Term - 203730 203672   59  1  2  109   55    23 0.586  -1.05
 5.03 Intr - 205458 205374   85  0  1   45   82    81 0.297   2.59
 5.02 Intr - 210212 210147   66  2  0   98   68    19 0.226   0.00
 5.01 Init - 215886 215803   84  0  0   69   74    61 0.276   3.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 180394 180469   76  0  1   89   56   100 0.866   6.20
S.002 Term + 180569 180654   86  0  2   95   47    77 0.964   2.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:8941624_9158251|GENSCAN_predicted_peptide_1|429_aa
MRALVLLLSLFLLGGQAQHVSDWTYSEGALDEAHWPQHYPACGGQRQSPINLQRTKVRYN
PSLKGLNMTGYETQAGEFPMVNNGHTVQISLPSTMRMTVADGTVYIAQQMHFHWGGASSE
ISGSEHTVDGIRHVIEIHIVHYNSKYKSYDIAQDAPDGLAVLAAFVEVKNYPENTYYSNF
ISHLANIKYPGQRTTLTGLDVQDMLPRNLQHYYTYHGSLTTPPCTENVHWFVLADFVKLS
RTQVWKLENSLLDHRNKTIHNDYRRTQPLNHRVVESNFPNQGRQPLETLSSVNITEHEIR
VHTVLLETQATEECVIRHEEGGLAYGSGCTVALERICPVGGKGCPLGGIMVVSRNLLHWI
PGLEEPHLCETQRLLFVLPSSQSMCFEWDVSACYNLLATRIVFRDRCDQGAQSGPTPECG
GTQPQHVQN

>gi568815597r:8941624_9158251|GENSCAN_predicted_CDS_1|1290_bp
atgagggccctggtgcttctgctgtccctgttcctgctgggtggccaggcccagcatgtg
tctgactggacctactcagaaggggcactggacgaagcgcactggccacagcactacccc
gcctgtgggggccagagacagtcgcctatcaacctacagaggacgaaggtgcggtacaac
ccctccttgaaggggctcaatatgacaggctatgagacccaggcaggggagttccccatg
gtcaacaatggccacacagtgcagatcagcctgccctccaccatgcgcatgacagtggct
gacggcactgtatacatagcccagcagatgcactttcactggggaggtgcgtcctcggag
atcagcggctctgagcacaccgtggacgggatcagacatgtgatcgagattcacattgtt
cactacaattctaaatacaagagctatgatatagcccaagatgcgccggatggtttggct
gtactggcagccttcgttgaggtgaagaattaccctgaaaacacttattacagcaacttc
atttctcatctggccaacatcaagtacccaggacaaagaacaaccctgactggccttgac
gttcaggacatgctgcccaggaacctccagcactactacacctaccatggctcactcacc
acgcctccctgcactgagaacgtccactggtttgtgctggcagattttgtcaagctctcc
aggacacaggtttggaagctggagaattccttactggatcaccgcaacaagaccatccac
aacgattaccgcaggacccagcccctgaaccacagagtggtggaatccaacttcccgaat
cagggccgacaacctttggaaacactgagcagtgttaacatcactgaacacgaaataaga
gtacacactgtgcttctggaaactcaggccacagaagaatgtgtaattcgccatgaagaa
ggagggctcgcctatggaagcggctgcacagtggctctagaaagaatatgtcctgtagga
gggaagggctgccctctgggtggaatcatggtggtctccagaaatctcctccactggatt
cctgggctggaggagccacatctctgtgagacacagcggctgctcttcgtcctccccagt
tctcagtccatgtgttttgagtgggatgtgtcagcgtgctacaacctgttggctacaagg
attgttttccgggatagatgtgatcaaggagcccaatcaggtcccaccccagaatgtggg
gggactcaaccacaacatgtacaaaactaa

>gi568815597r:8941624_9158251|GENSCAN_predicted_peptide_2|524_aa
MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVGTSCGWGNV
FQVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTL
LINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMV
GTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLI
QKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSII
VLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRR
HLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEI
FLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLTAIYIYVVIPE
TKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF

>gi568815597r:8941624_9158251|GENSCAN_predicted_CDS_2|1575_bp
atggagaacaaagaggcgggaacccctccacccattccatccagggaggggcggctccag
ccgacgctgttgctggcgacactgagcgcggcctttggctcagccttccagtacggctac
aacctctctgtggtcaacacgccgcacaaggtgggcacaagctgtggatggggcaatgtt
ttccaggtcttcaagtcattttacaacgaaacctactttgagcgacacgcaacattcatg
gacgggaagctcatgctgcttctatggtcttgcaccgtctccatgtttcctctgggcggc
ctgttggggtcattgctcgtgggcctgctggttgatagctgcggcagaaaggggaccctg
ctgatcaacaacatctttgccatcatccccgccatcctgatgggagtcagcaaagtggcc
aaggcttttgagctgatcgtcttttcccgagtggtgctgggagtctgtgcaggcatctcc
tacagcgcccttcccatgtacctgggagaactggcccccaagaacctgagaggcatggtg
ggaacaatgaccgaggttttcgtcatcgttggagtcttcctagcacagatcttcagcctc
caggccatcttgggcaacccggcaggctggccggtgcttctggcgctcacaggggtgccc
gccctgctgcagctgctgaccctgcccttcttccccgaaagcccccgctactccctgatt
cagaaaggagatgaagccacagcgcgacaagctctgaggaggctgagaggccacacggac
atggaggccgagctggaggacatgcgtgcggaggcccgggccgagcgcgccgagggccac
ctgtctgtgctgcacctctgtgccctgcggtccctgcgctggcagctcctctccatcatc
gtgctcatggccggccagcagctgtcgggcatcaatgcgatcaactactatgcggacacc
atctacacatctgcgggcgtggaggccgctcactcccaatatgtaacggtgggctctggc
gtcgtcaacatagtgatgaccatcacctcggctgtccttgtggagcggctgggacggcgg
cacctcctgctggccggctacggcatctgcggctctgcctgcctggtgctgacggtggtg
ctcctattccagaacagggtccccgagctgtcctacctcggcatcatctgtgtctttgcc
tacatcgcgggacattccattgggcccagtcctgtcccctcggtggtgaggaccgagatc
ttcctgcagtcctcccggcgggcagctttcatggtggacggggcagtgcactggctcacc
aacttcatcataggcttcctgttcccatccatccaggaggccatcggtgcctacagtttc
atcatctttgccggaatctgcctcctcactgcgatttacatctacgtggttattccggag
accaagggcaaaacatttgtggagataaaccgcatttttgccaagagaaacagggtgaag
cttccagaggagaaagaagaaaccattgatgctgggcctcccacagcctctcctgccaag
gaaacttccttttag

>gi568815597r:8941624_9158251|GENSCAN_predicted_peptide_3|618_aa
MTASRHAPVPALGSLQGGSTGRALVTPWLCLRRPVTGRNRRLTLVLALATLIAAFGSSFQ
YGYNVAAVNSPALLMQQFYNETYYGRTGEFMEDFPLTLLWSVTVSMFPFGGFIGSLLVGP
LVNKFGRCAVSISGSHVWQVSQCLGMLELHSLTASSIMRVLIMRAPLREAPPEKFALLLS
GSPGKGALLFNNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELA
PKNLRGALGVVPQLFITVGILVAQIFGLRNLLANVDGWPILLGLTGVPAALQLLLLPFFP
ESPRYLLIQKKDEAAAKKALQTLRGWDSVDREVAEIRQEDEAEKAAGFISVLKLFRMRSL
RWQLLSIIVLMGGQQLSGVNAIYYYADQIYLSAGVPEEHVQYVTAGTGAVNVVMTFCAVF
VVELLGRRLLLLLGFSICLIACCVLTAALALQLIAHVQLISQWLIEVALLGEEPGAILHP
PGQDTVSWMPYISIVCVISYVIGHALGPSPIPALLITEIFLQSSRPSAFMVGGSVHWLSN
FTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFLIVPETKAKTFIEINQIFTKMNKVSE
VYPEKEELKELPPVTSEQ

>gi568815597r:8941624_9158251|GENSCAN_predicted_CDS_3|1857_bp
atgacggcctcccgccacgcccccgtccccgcgctcggctccctccagggcggaagcacg
ggtcgagcgttggtgacgccatggctgtgcttgcgacgccctgtcactggcaggaaccgg
aggctgacgcttgtgcttgccctggcaaccctgatagctgcctttgggtcatccttccag
tatgggtacaacgtggctgctgtcaactccccagcactgctcatgcaacaattttacaat
gagacttactatggtaggaccggtgaattcatggaagacttccccttgacgttgctgtgg
tctgtaaccgtgtccatgtttccatttggagggtttatcggatccctcctggtcggcccc
ttggtgaataaatttggcaggtgtgctgttagtataagcggctctcacgtgtggcaagtt
tctcagtgtttaggaatgctggagctccactcgctgacagcttcgtccatcatgagggtc
ctcatcatgagggctccattgcgagaggcccctccagagaagtttgctttgcttctgtca
ggatctccaggaaaaggggccttgctgttcaacaacatattttctatcgtgcctgcgatc
ttaatgggatgcagcagagtcgccacatcatttgagcttatcattatttccagacttttg
gtgggaatatgtgcaggtgtatcttccaacgtggtccccatgtacttaggggagctggcc
cctaaaaacctgcggggggctctcggggtggtgccccagctcttcatcactgttggcatc
cttgtggcccagatctttggtcttcggaatctccttgcaaacgtagatggctggccgatc
ctgctggggctgaccggggtccccgcggcgctgcagctccttctgctgcccttcttcccc
gagagccccaggtacctgctgattcagaagaaagacgaagcggccgccaagaaagcccta
cagacgctgcgcggctgggactctgtggacagggaggtggccgagatccggcaggaggat
gaggcagagaaggccgcgggcttcatctccgtgctgaagctgttccggatgcgctcgctg
cgctggcagctgctgtccatcatcgtcctcatgggcggccagcagctgtcgggcgtcaac
gctatctactactacgcggaccagatctacctgagcgccggcgtgccggaggagcacgtg
cagtacgtgacggccggcaccggggccgtgaacgtggtcatgaccttctgcgccgtgttc
gtggtggagctcctgggtcggaggctgctgctgctgctgggcttctccatctgcctcata
gcctgctgcgtgctcactgcagctctggcactgcagctcatagcccacgttcagctgatt
tcccagtggctcatcgaggtggcactgctgggggaggagccaggtgccatcctccaccca
ccagggcaggacacagtgtcctggatgccatacatcagcatcgtctgtgtcatctcctac
gtcataggacatgccctcgggcccagtcccatacccgcgctgctcatcactgagatcttc
ctgcagtcctctcggccatctgccttcatggtggggggcagtgtgcactggctctccaac
ttcaccgtgggcttgatcttcccgttcatccaggagggcctcggcccgtacagcttcatt
gtcttcgccgtgatctgcctcctcaccaccatctacatcttcttgattgtcccggagacc
aaggccaagacgttcatagagatcaaccagattttcaccaagatgaataaggtgtctgaa
gtgtacccggaaaaggaggaactgaaagagcttccacctgtcacttcggaacagtga

>gi568815597r:8941624_9158251|GENSCAN_predicted_peptide_4|367_aa
MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLS
AASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRL
LWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEML
AYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVW
STVRFVLTLCGSPAVQTPVLVVLHRRHSLIPSRSTVAAPQCRPRHSCREELGPTVLCLPL
CLRQDLEERRQSGISVVRGDPQAASSTGTSVLAHGWAFICIRVAVRFGKPVAHSCGHSAP
TQWTLMS

>gi568815597r:8941624_9158251|GENSCAN_predicted_CDS_4|1104_bp
atgcagccgtccccgccgcccaccgagctggtgccgtcggagcgcgccgtggtgctgctg
tcgtgcgcactctccgcgctcggctcgggcctgctggtggccacgcacgccctgtggccc
gacctgcgcagccgggcacggcgcctgctgctcttcctgtcgctggccgacctgctctcg
gccgcctcctacttctacggagtgctgcagaacttcgcgggcccgtcgtgggactgcgtg
ctgcagggcgcgctgtccaccttcgccaacaccagctccttcttctggaccgtggccatt
gcgctctacttgtacctcagcatcgtccgcgccgcgcgcgggcctcgcacagatcgcctg
ctttgggccttccatgtcgtcagctggggggtcccgttggtcatcactgtggcagccgtc
gccctgaagaagattggctatgacgcctcggacgtgtctgtgggctggtgctggatcgac
ctggaggccaaggaccatgtcctgtggatgctgctgacggggaagctgtgggagatgctg
gcatatgtgctgctgcctctgctgtacctcctggtccggaagcacatcaacagagcgcac
acggcactctctgagtaccggcccatcctctcccaggagcaccgcctgctgcgccactcc
tccatggcggacaagaagctggtgctcatcccgctcatcttcatcggcctcagggtctgg
agcaccgtgcggttcgtgctgaccctctgtggctccccggccgtgcagacgccggtgctg
gtggttctgcataggaggcacagcctgattccttcccgcagcacagtggctgcaccccag
tgtcggccaaggcacagctgcagggaggagctcggccccactgtgctgtgccttcctctc
tgcctgagacaggaccttgaagagagaaggcagagtgggatcagtgtggtccggggtgat
cctcaggcagcaagttccaccggtaccagcgtcctggcccacgggtgggcgttcatctgc
ataagggtagcagtgagattcgggaagccggtggcccacagctgtggccacagtgccccc
acccagtggaccttgatgtcctga

>gi568815597r:8941624_9158251|GENSCAN_predicted_peptide_5|97_aa
MGAEDEVMTPHTRNLMFAVMVEACPWWGVLGRGRTGLSPESPPDAVDRPAQHYQVQSRGP
PPRCLPFPGQDDPNFLMESAELASWVCSLDGHTGPGA

>gi568815597r:8941624_9158251|GENSCAN_predicted_CDS_5|294_bp
atgggagcagaggatgaggtcatgaccccacacacccgcaacctgatgtttgctgtcatg
gtggaagcatgcccgtggtggggggtgctggggagaggcaggacaggcctgtcccccgag
tcccctccggatgccgtggaccggccagctcagcactaccaggtacagtccaggggcccc
ccaccaagatgcctgcccttccctggtcaagatgaccccaacttcctgatggaatcagca
gagctggcttcatgggtgtgcagcctggatggccacacagggcccggtgcctga