GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:27:57

Sequence gi568815597r:97620891_98020922 : 400032 bp : 34.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   2789   3112  324  1  0   88   41   140 0.836   5.05
 1.02 PlyA +   4360   4365    6                               1.05

 2.12 PlyA -   4982   4977    6                               1.05
 2.11 Term -  18298  18132  167  2  2   48   42   100 0.000  -1.50
 2.10 Intr -  58292  58205   88  2  1   57   95    89 0.193   5.12
 2.09 Intr -  70908  70827   82  2  1  117   94   127 0.209  14.92
 2.08 Intr -  78657  78461  197  0  2  100   90    95 0.672   8.19
 2.07 Intr - 100781 100620  162  2  0   66   87    66 0.183   3.55
 2.06 Intr - 119589 119502   88  2  1   74   94    61 0.276   4.35
 2.05 Intr - 153400 153309   92  1  2   69   98    49 0.038   1.87
 2.04 Intr - 153643 153497  147  1  0   70   42    84 0.031   1.51
 2.03 Intr - 200171 200123   49  1  1  114   75    -3 0.028  -1.24
 2.02 Intr - 207306 207224   83  0  2   36  107   171 0.296  11.32
 2.01 Init - 215060 215034   27  2  0   77  105    17 0.367   1.95
 2.00 Prom - 221898 221859   40                              -6.55

 3.00 Prom + 222423 222462   40                              -3.85
 3.01 Init + 223754 223794   41  1  2   98   92    62 0.383   7.31
 3.02 Intr + 225006 225159  154  0  1    9   80    88 0.033  -0.75
 3.03 Term + 234766 234972  207  0  0   -9   43   232 0.568   5.36
 3.04 PlyA + 237555 237560    6                               1.05

 4.00 Prom + 238608 238647   40                              -4.25
 4.01 Init + 243761 243810   50  1  2   86   63    84 0.355   6.17
 4.02 Term + 248147 248273  127  2  1  122   49    88 0.900   5.07
 4.03 PlyA + 248382 248387    6                               1.05

 5.00 Prom + 252555 252594   40                              -2.65
 5.01 Init + 256048 256155  108  0  0   78   64    97 0.309   6.57
 5.02 Intr + 277701 277836  136  2  1  113   88    11 0.096   2.82
 5.03 Intr + 285233 285318   86  0  2   52   67    46 0.006  -2.48
 5.04 Term + 299943 300146  204  2  0   60   49   195 0.927   9.19
 5.05 PlyA + 305056 305061    6                               1.05

 6.03 PlyA - 305433 305428    6                               1.05
 6.02 Term - 313279 313144  136  0  1  111   44   125 0.938   6.91
 6.01 Init - 319232 319165   68  2  2   75   78    25 0.714   0.80
 6.00 Prom - 326168 326129   40                              -6.75

 7.05 PlyA - 326416 326411    6                               1.05
 7.04 Term - 332929 332828  102  1  0   78   54    92 0.658   2.10
 7.03 Intr - 334930 334836   95  2  2   53   81    48 0.043  -0.64
 7.02 Intr - 374110 374026   85  1  1  100   93    71 0.467   7.27
 7.01 Intr - 399089 399004   86  0  2   94   76    52 0.179   3.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_1|107_aa
MSKKNKTGGITLPDFKLYNKARVIKTERYSPKKNRHINQGNRVEHPEINPCIYDQLIFDK
GAKNKQWVKDSLIEKYYWENWISTCRRTKFDLAPYKKPTQNVLNTET

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_1|324_bp
atgagcaaaaagaacaaaactggaggtatcacattacctgatttcaaactatacaacaaa
gctagagtaattaaaacagaaaggtattcgccaaaaaaaaatagacacatcaaccaaggg
aacagagtagagcatccagaaataaacccatgcatatatgatcaactgatttttgacaaa
ggtgccaagaataagcaatgggtaaaggatagtctcattgaaaagtactattgggaaaac
tggatttccacatgtagaagaacaaaatttgaccttgcaccatataaaaaaccaactcaa
aatgtactaaatactgaaacataa

>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_2|393_aa
MGQIVQSLKNCEKLENNFDDIKHTTLGERGALREAMSLTGSRGLWVIDICNWKVEAESVY
LYRWSDLHLWQLSEMLILPSNIATASSKTLNIIKEEIRAFQTERERGGSVLEEWQILQFC
IHTLLPGSWMSPRCLKCADAPCQKSCPTNLDIKSFITSIANKNYYGAAKMIFSDNPLGLT
CGMVCPTSDLCVGGCNLYATEEGPINIGGLQQFATEVFKAMSIPQIRNPSLPPPEKMSEA
YSAKIALFGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEI
ELMKDLGVKIICGKSLSVNEMTLSTLKEKGYKAAFIGIETPRLFKTVCLTVSKWVVLVEC
NPVSVYLLPHQLPTKKICLTTLLMGNNAGLFCG

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_2|1182_bp
atgggtcagattgttcagagcttaaagaattgtgagaagctggagaataattttgatgac
atcaagcacacgactcttggtgagcgaggagctctccgagaagcaatgagtctcacaggc
agtagagggctatgggtaatagatatatgcaattggaaggtagaggctgagtcggtgtac
ctctacaggtggtctgatttgcacctttggcagctgagtgaaatgctcattttacctagt
aacattgccacagcctctagcaaaactcttaatatcataaaggaagagataagagccttt
caaacagaaagagagagaggtggcagtgttttggaagagtggcagatcctacagttttgc
attcatactctccttccaggatcctggatgagccccagatgcctgaaatgtgcagatgcc
ccgtgtcagaagagctgtccaactaatcttgatattaaatcattcatcacaagtattgca
aacaagaactattatggagctgctaagatgatattttctgacaacccacttggtctgact
tgtggaatggtatgtccaacctctgatctttgtgtaggtggatgcaatttatatgccact
gaagagggacccattaatattggtggattgcagcaatttgctactgaggtattcaaagca
atgagtatcccacagatcagaaatccttcgctgcctcccccagaaaaaatgtctgaagcc
tattctgcaaagattgctctttttggtgctgggcctgcaagtataagttgtgcttccttt
ttggctcgattggggtactctgacatcactatatttgaaaaacaagaatatgttggtggt
ttaagtacttctgaaattcctcagttccggctgccgtatgatgtagtgaattttgagatt
gagctaatgaaggaccttggtgtaaagataatttgcggtaaaagcctttcagtgaatgaa
atgactcttagcactttgaaagaaaaaggctacaaagctgctttcattggaatagagaca
ccaagattatttaaaactgtgtgccttacagttagcaaatgggtagtgctggttgaatgc
aacccagtgtctgtatatcttctgcctcatcaactgcctacaaagaagatttgccttact
acactgctgatgggtaacaatgcaggactgttctgtggctaa

>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_3|133_aa
MASATPSIGPAGASCSLTWSRDLYQCLELPTLLQQQASLAVCNGWTPHSLTHTPLATLQL
ACPGQEIHRNTIHVAATKTAFEIHQNNEEQLQTALKDTSDKNSNLQGNTELLSQEAEEWK
REEGANILSRIKC

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_3|402_bp
atggccagcgctacaccctccatagggccagcaggagccagctgcagcctcacatggagc
cgggacctgtaccagtgcctggagctgcccaccctgctgcagcagcaagcatccctggct
gtgtgcaatgggtggaccccacactcactcactcacacacctcttgccactctgcaactg
gcttgccctgggcaggagattcatcgaaacacaattcacgtagctgcaaccaaaacagcc
ttcgaaatacatcagaacaatgaagaacaacttcagacagcattgaaagacacttcggat
aaaaattccaatcttcagggaaacacagagctgctttcacaagaagctgaagagtggaaa
agggaagagggagcaaacatactaagcagaataaaatgctag

>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_4|58_aa
MATREAVLRRKILREGSLAFSDFQYMLQVENGHPAAPSFHFIPAQTAQNEKESLVIDI

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_4|177_bp
atggcgactcgagaagctgttctaagaagaaaaatacttcgagaaggaagcctggccttt
tctgattttcagtacatgttgcaagtggaaaatggccaccctgcagcaccaagctttcat
tttattcctgctcaaacagcccagaatgaaaaagaatctcttgtcatagatatctag

>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_5|177_aa
MRTKSKVKGPEILADLGERGSMPSSLGYSQRADKYQVEMCTGKNLIGLSCSNPEQYGLTV
SPTKPTLNCNNPHVTRVGLGEARTAFLHLSLENDHLIHFLAPKLLDIEVKSTPHHPATTD
EPARSPYLDVRRVLTEHRGHGSAYSLESASDKPSLRPQAPAREPSDSSRSASRKQAD

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_5|534_bp
atgaggaccaaaagcaaagtgaagggcccagagatattggcagatcttggagaaagagga
tcaatgcccagctccttaggctattctcagagggctgacaaataccaggtggaaatgtgt
acaggaaagaacctgataggcctgagttgctcaaatcctgagcaatatggtttgactgtg
tccccaaccaaacccaccttgaactgtaataatccccatgtcacacgggtggggctaggt
gaagccaggacagccttccttcacctgtccttggaaaatgatcacctaattcattttctg
gcccctaaattactggatattgaggtgaagagcactccccaccaccccgccaccaccgac
gagccggcgcgaagtccgtacctcgatgtccgccgagtccttactgagcacaggggccat
ggcagtgcctacagtctcgagtctgccagtgacaaaccctccttgcgtcctcaagctcca
gccagagagccaagtgacagcagccggagcgcgagtcgaaaacaggcagactag

>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_6|67_aa
MVDSKTEARNIQDKLGAYCSAKKIVNTVAIENNRNNCFMTNGPEPYEMNLQALAQLTYAT
NNHLQTV

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_6|204_bp
atggttgattccaaaactgaggctaggaatatacaagataagcttggggcatattgtagt
gccaaaaagattgtcaacactgtggcaattgaaaataacaggaataactgttttatgaca
aatggacctgaaccctatgaaatgaatttgcaagcactggcacagttaacatatgctaca
aacaaccatcttcagacagtgtag

>gi568815597r:97620891_98020922|GENSCAN_predicted_peptide_7|122_aa
XYVSMQYYTYLIYIGVDYKLQETDRKLLEASKASGMCSDCKNSDVVKKAYALPPLKPVWQ
ECRNLPSVFQKLFSFLAVTCVASENGKYLPRREKSTVNYNAHKCLKDKTDQLIRNNMVCT
ET

>gi568815597r:97620891_98020922|GENSCAN_predicted_CDS_7|369_bp
naatatgttagcatgcaatactacacttatctcatctacattggtgtagactacaagcta
caggaaacagataggaagcttctagaggcatccaaagcctctgggatgtgttctgactgt
aaaaactctgatgttgtgaaaaaagcttacgctttgcctccactcaaaccagtttggcaa
gagtgcagaaatctcccatctgtttttcagaagctgttcagcttcttggctgtcacctgt
gtagcttcagaaaatggcaaatatctgccaagacgagagaaaagcacagtcaattataat
gcccacaaatgtctgaaagataaaacagaccagttgattagaaacaatatggtttgtact
gaaacatga