GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:19:24

Sequence gi568815585r:41160493_41360907 : 200415 bp : 39.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -  10549  10278  272  1  2   49   91   282 0.232  21.09
 1.00 Prom -  16577  16538   40                              -5.95

 2.02 PlyA -  16703  16698    6                               1.05
 2.01 Sngl -  33765  31711 2055  0  0   96   36  2151 0.999 203.67
 2.00 Prom -  38615  38576   40                              -5.35

 3.00 Prom +  38749  38788   40                              -5.75
 3.01 Init +  53056  53132   77  0  2    1  101   111 0.495   4.31
 3.02 Term +  53242  53650  409  1  1   46   45   216 0.738   6.80
 3.03 PlyA +  54639  54644    6                               1.05

 4.12 PlyA -  55116  55111    6                               1.05
 4.11 Term -  56736  56623  114  0  0   84   36   125 0.963   4.49
 4.10 Intr -  62862  62764   99  0  0   76   85    88 0.989   6.69
 4.09 Intr -  66076  65940  137  2  2  107  110    70 0.995  10.47
 4.08 Intr -  73515  73398  118  0  1   58  115   155 0.999  14.32
 4.07 Intr -  79941  79769  173  1  2  110   76   218 0.744  21.54
 4.06 Intr -  81330  81204  127  0  1   36   -9   131 0.194  -2.47
 4.05 Intr -  87070  86805  266  2  2   33   38   302 0.228  16.01
 4.04 Intr -  92260  92153  108  2  0  125   66   112 0.788  12.04
 4.03 Intr -  92538  92457   82  0  1   57   78    68 0.945   0.99
 4.02 Intr -  94128  94037   92  1  2   93   92   100 0.999   9.69
 4.01 Init - 100214 100001  214  2  1   77   56   173 0.973  11.95
 4.00 Prom - 110567 110528   40                              -5.55

 5.04 PlyA - 110695 110690    6                               1.05
 5.03 Term - 127601 127342  260  0  2   67   44   177 0.485   5.93
 5.02 Intr - 127867 127786   82  1  1   69   37   122 0.627   3.49
 5.01 Init - 129316 129137  180  1  0   77   16   221 0.662  13.04
 5.00 Prom - 132702 132663   40                              -6.85

 6.00 Prom + 135360 135399   40                              -2.85
 6.01 Init + 138321 138365   45  2  0   87   84    81 0.510   8.33
 6.02 Term + 146144 146248  105  1  0   85   37    79 0.003  -0.07
 6.03 PlyA + 149516 149521    6                               1.05

 7.03 PlyA - 149691 149686    6                               1.05
 7.02 Term - 151408 151016  393  1  0  -13   43   454 0.962  24.85
 7.01 Init - 151826 151683  144  2  0   64   84    98 0.603   7.17
 7.00 Prom - 154164 154125   40                              -5.95

 8.00 Prom + 155015 155054   40                              -7.65
 8.01 Init + 159212 159260   49  1  1   88   58    28 0.601  -1.01
 8.02 Intr + 160175 160332  158  0  2   72   91    84 0.935   5.91
 8.03 Intr + 162564 162698  135  2  0   28   71    90 0.541   1.14
 8.04 Intr + 165206 165359  154  1  1   82  115    71 0.987   7.92
 8.05 Intr + 168232 168351  120  2  0   63   30   103 0.212   1.55
 8.06 Intr + 176158 176264  107  2  2   71   93    -1 0.033  -2.29
 8.07 Intr + 194652 194724   73  2  1   83  115    21 0.643   2.36
 8.08 Intr + 197812 197981  170  2  2   68   93    89 0.829   6.14
 8.09 Intr + 198318 198470  153  2  0   55   53   129 0.469   5.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 143634 143519  116  1  2  105   49    77 0.982   3.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_1|91_aa
MRSLGQNPTEAELQDMINEVDADGNGTVDFPEFLTMMARKMKDTDSEEEIRDAFCVFDKD
GNGYISATELHHVMTNLGENLTDDEVDEMIS

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_1|273_bp
atgaggtctcttgggcagaatcccacagaagcagagttacaggacatgattaatgaagta
gatgctgatggtaatggcacagttgacttccctgaatttctaacaatgatggcaagaaaa
atgaaagacacagacagtgaagaagaaattagagatgcattctgtgtgtttgataaggat
ggcaatggctatattagtgcaacagaacttcaccatgtgatgacaaaccttggagagaat
ttaacagatgacgaggttgatgaaatgatcagn

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_2|684_aa
MQSREDVPRSRRLASPRGGRRPKRISKPSVSAFFTGPEELKDTAHSAALLAQLKSFYDAR
LLCDVTIEVVTPGSGPGTGRLFSCNRNVLAAACPYFKSMFTGGMYESQQASVTMHDVDAE
SFEVLVDYCYTGRVSLSEANVQRLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFA
DAFDHHKLRSQAQSYIAHNFKQLSRMGSIREETLADLTLAQLLAVLRLDSLDIESERTVC
HVAVQWLEAAAKERGPSAAEVFKCVRWMHFTEEDQDYLEGLLTKPIVKKYCLDVIEGALQ
MRYGDLLYKSLVPVPNSSSSSSSSNSLVSAAENPPQRLGMCAKEMVIFFGHPRDPFLCYD
PYSGDIYTMPSPLTSFAHTKTVTSSAVCVSPDHDIYLAAQPRKDLWVYKPAQNSWQQLAD
RLLCREGMDVAYLNGYIYILGGRDPITGVKLKEVECYSVQRNQWALVAPVPHSFYSFELI
VVQNYLYAVNSKRMLCYDPSHNMWLNCASLKRSDFQEACVFNDEIYCICDIPVMKVYNPA
RGEWRRISNIPLDSETHNYQIVNHDQKLLLITSTTPQWKKNRVTVYEYDTREDQWINIGT
MLGLLQFDSGFICLCARVYPSCLEPGQSFITEEDDARSESSTEWDLDGFSELDSESGSSS
SFSDDEVWVQVAPQRNAQDQQGSL

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_2|2055_bp
atgcagtcccgggaagacgtcccgcgctctcgccgcctcgccagtccccgtggtgggagg
cggcccaagaggatttccaagccctcggtttcggcctttttcacgggtccagaggagtta
aaggacacggcccattctgcagccctgctggcacagctcaagtccttctacgacgcgcgg
ctgctgtgtgatgtgaccatcgaggtggtgacgcctggcagcgggcctggcacgggtcgc
ctcttttcctgcaatcgcaacgtgctagcagctgcgtgtccctacttcaagagcatgttc
acaggtggcatgtacgagagccagcaggccagcgtgaccatgcacgatgtggacgccgag
tccttcgaggtgttggtcgactactgctacacgggtcgtgtgtctctcagtgaggccaat
gtgcagcgcctgtacgcggcctccgacatgctacagctggaatatgtgcgggaagcctgt
gcctccttcttagcccgacgtcttgacctgaccaactgcaccgccatcctcaagtttgca
gacgccttcgaccatcacaagcttcgatctcaggcccagtcctacatagctcacaacttc
aagcagctcagccgaatgggttcaattcgggaggagactctagcagatctaaccctggcc
cagctgctggctgtcctacgcctggatagtctggacatagagagtgagcggactgtatgc
catgtagctgtgcagtggctggaggctgctgccaaagagcggggtcccagtgctgcagaa
gtcttcaagtgcgtgcgctggatgcacttcactgaagaagatcaggactacttagaaggg
ctgctgaccaagcccatcgtgaagaagtactgcctggacgttattgaaggggccctgcag
atgcgctatggtgacctgttgtacaagtctctggtgccagtgccaaacagcagcagcagc
agtagcagcagcaactctcttgtatctgcagcagaaaatccaccccagagactgggtatg
tgtgccaaggagatggtgatcttctttggacatcctagagatccctttctctgctatgac
ccttactcgggggacatttacacaatgccatcccctttgaccagctttgctcacactaag
actgtcacctcctcagctgtctgtgtgtccccagaccatgacatctatctagctgctcag
cccaggaaagacctctgggtgtataaaccagctcagaatagttggcagcaacttgcagat
cgcttgctgtgtcgtgagggcatggatgtggcatatctcaatggctacatctacattttg
gggggacgagaccctattactggagttaagttgaaggaagtggaatgctacagtgttcag
agaaaccagtgggcattggtggctcctgtccctcattccttctattcctttgaactcata
gtggttcagaactatctttatgctgtcaacagtaagcgcatgctttgctatgatcctagc
cacaatatgtggctgaactgtgcttctcttaaacgtagtgactttcaggaagcatgtgtc
ttcaatgatgaaatctattgtatctgtgacatcccagtcatgaaggtctacaacccagct
aggggagaatggaggcggattagtaatattcctttggattcagagacccacaactaccag
attgtcaatcatgaccaaaagttgcttctcatcacttctacaaccccacaatggaaaaag
aaccgagtgacagtgtatgagtatgatactagggaagatcagtggattaatataggtacc
atgttaggccttttgcagtttgactctggctttatttgcctttgtgctcgtgtttatcct
tcctgccttgaacctggtcagagttttattactgaggaagatgatgcacggagtgagtct
agtactgaatgggacttagatggattcagtgagctggactctgagtcaggaagttcaagt
tctttttcagatgatgaagtctgggtgcaagtagcacctcagcgaaatgcacaggatcag
cagggttctttgtaa

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_3|161_aa
MFAQAVRLYNKQVVKPAKLVSVSSGWLAPKPQDKILHTLPSPFHKQRGLSLWPLPPLTHG
EFCQTTTSVHLRPKGSSVSCDKCCQAWNSPLRVVKSPLAQCRSRNAIQEPGPGDPKSPLV
LYTMAKLIPEAGMSESHSRSTAYCLCIAVGYSGPMGSLVSR

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_3|486_bp
atgtttgcacaggccgtaaggctctacaataagcaggtggtgaagccagccaagcttgtg
tccgtctcttcaggatggctggcacccaaaccacaagacaaaatccttcacactcttccc
tcccctttccacaagcagaggggcctctccctatggcctctgccaccactgacccatggc
gaattctgtcagaccaccactagtgttcacttaaggcccaagggctcttcagtcagctgt
gacaaatgttgccaggcctggaactcacccctcagggtagtgaaatcccctctggcacag
tgcaggtccagaaatgctatccaagagcctggacctggggaccccaagagcccgttggtg
ctctacaccatggccaagctgatacctgaggctggcatgtccgagtctcactcaaggtcc
acagcatactgcctgtgcatcgctgttggttactcagggcccatgggctctttagtcagc
aggtga

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_4|509_aa
MLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETE
QAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVIL
EVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYALLFRLYRRQVDPGE
MMDYRKLNQAVNPIAAAIPDVVSSVEQINIIPGTWYTAVDVANAFFSIPVNESQQKQFAF
IQQGHNTPSLSSVRLPNCCRYRGQQNRVTCTKNMQSAKTDCWKFYRSAAQVLHQIICGLH
HAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLD
PKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL
YQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKG
LDQLIQRLLQSADEEAIAELLDEHLKSAK

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_4|1530_bp
atgctctggaagcataaagcactacagaaatatatggagaacctgagtaaggagtaccaa
acacttgagcaatgtctgcagcatatccctgtgaatgaggaaaaccgaaggtccttgaac
agaaggcatgctgagttggcacctcttgcagccatttaccaagaaattcaggagactgaa
caagcaattgaagaattagaatcaatgtgtaaaagcctaaataaacaagatgaaaagcag
ttacaagaacttgcactggaagaaaggcaaaccattgatcaaaaaatcaacatgttgtac
aatgagcttttccagagccttgtgccaaaggagaaatatgacaaaaatgatgttatttta
gaggtgacagctggaaggactactggaggtgacatctgccaacaatttacccgagaaata
tttgacatgtaccagaattattcgtgctataaacactggcaatttgaacttctgaattat
acaccagcagattatgctctcctatttcgcctgtacagaagacaggtggatcctggagaa
atgatggattatcgaaagcttaaccaggcagtgaatccaattgcagctgctataccagat
gtggtttcatcagttgagcaaattaacataatccctggtacctggtatacagctgttgat
gtggcaaatgcctttttctccatccctgtcaatgaaagccagcagaagcagtttgctttc
atccagcaaggccacaatacaccttcattgtcctccgttaggctgcctaattgctgccga
tacagagggcagcagaacagggtgacttgcaccaagaatatgcagtctgcaaaaacagac
tgttggaaattctacaggtcagcagcccaagttcttcaccagatcatttgtggactacat
catgcagccgcccgaatttccggtgacggtgtctataagcatttgaagtatgagggtggg
attcaccgagttcagcgcatccccgaggtgggcctgtcctcaaggatgcagcgcattcac
acaggaacgatgtcggttattgtccttcctcagccagatgaggtggatgtgaaattggac
cccaaggatttgcgaatagatacatttcgagccaaaggagcaggagggcagcatgttaat
aaaactgatagtgccgtcagacttgtccacatccccacagggctagtagtagaatgccaa
caagaaagatcacagataaaaaataaagaaatagcctttcgtgtgttgagagctagactc
taccagcagattattgagaaagacaagcgtcagcaacaaagtgctagaaaactgcaggtg
ggaacaagagcccagtcagagcgaattcggacatataatttcacccaggatagagtcagt
gaccacaggatagcatatgaagttcgtgatattaaggaatttttatgtggtgggaagggc
ctggatcagctaattcagagactgcttcaatcagcagatgaagaagccattgctgaactt
ttggatgaacaccttaaatcagcaaaataa

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_5|173_aa
MEKNWALFVDQCRLQALRFSVDLFDLLSILVRCDSFAGIQKAVVDQIGSRPSNSDHDLCL
CLTTTARAQRVTQVQAIKCVVVGDGATNIFLICFSLVSLASFENVCAEWHPEMQHHFPNT
PIILVGSKLDLNVVKDTIEKLKEKKLTPITYLQFLARNKEIGALKYLKCLALT

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_5|522_bp
atggagaagaattgggccctatttgttgaccaatgccggctgcaggctttgcggttttca
gtggatctctttgatttgctgagcatacttgtcagatgtgatagttttgcagggattcag
aaagctgtcgtggatcagatcggcagcagaccatcaaacagtgaccatgacctttgtctg
tgcctaaccaccactgccagggcccagcgagtgacccaggtgcaagccatcaagtgtgtg
gtggttggagatggagctacaaacatatttttaatatgcttctcccttgtgagtcttgca
tcatttgaaaatgtctgtgcagagtggcatcctgaaatgcagcaccattttcccaacact
cccatcattcttgtgggaagtaaacttgatcttaatgttgttaaagacacgattgagaaa
ctgaaggagaagaagctgactcccatcacctatctgcagtttttagccaggaataaggag
attggcgctttaaaatacctgaagtgcttggctctcacatag

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_6|49_aa
MEPEQRKKEEEEEREAEREESVAHITYVKRALGIAKVFTDVVTVILLYA

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_6|150_bp
atggagccagaacagcggaagaaggaggaagaggaggaaagggaggctgaacgagaagaa
tcagtggcccatattacatatgtaaaaagggctttgggaattgcaaaggtctttacagat
gtggttactgttattttactttatgcatga

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_7|178_aa
MLPSNAKPASPRGFNYSSKACATKKQTAVLKLVTTQKRTSSQIFTSKERARQPLPAEAAV
PGHCGERREVSGKSAAGVRRAAEDRGKEAHGGAARQPPWAGRSGKVGSRDLRGKQRAVGS
GGQAWPAPAAARPLALKARGPGDRGAAARPTATHQDAFEEVALLGRQQHVRHRGRQGG

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_7|537_bp
atgctcccctcaaatgcaaaaccagccagtccacgcggctttaattactcaagcaaggcc
tgtgcgactaaaaagcaaacagctgttttgaagttggtgacaactcagaaacgcacttca
agtcaaatattcacttccaaagagagagcacggcagccactaccggccgaggcggctgtg
cccgggcactgcggagagcggcgtgaagtttctggaaagagcgcggcgggggtgaggcga
gccgcagaagaccgcggaaaggaagcgcacggaggagcggctcggcagcccccgtgggcc
ggccggagcgggaaagtggggtcccgcgacctccgaggtaaacaaagagcggtgggcagc
ggaggccaagcctggcccgcgccggccgccgccagaccgcttgcccttaaggcccgagga
cccggggaccggggggcggcagcgcggcctacggccactcaccaagatgcgtttgaagag
gttgctctccttgggcggcagcagcacgttcggcatcgtggccggcagggaggctag

>gi568815585r:41160493_41360907|GENSCAN_predicted_peptide_8|373_aa
MEFRHVGQADLELLTSGWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQI
QMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKDYDMALKLLEEFRQTQQVPPNKI
DYEYSELILYQNQVMREADLLQESLEHIEMYEKQICDKLLVEEIKGEILLKLGRLKEASE
VFKNLIDRNAENWCYYEGLEKALQISERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTE
KVSIIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYI
NAAIASTPTLIELFYMKAKIYKHIGNLKEAAKWMDEAQSLDTADRFINSKCAKYMLRANM
IKEAEEMCSKFTR

>gi568815585r:41160493_41360907|GENSCAN_predicted_CDS_8|1119_bp
atggagtttcgccatgttggtcaggctgatctcgaactcctgacctcaggttggcatgta
tatggactcttgcagcgttctgataaaaaatatgatgaagctataaaatgttaccgaaat
gccctcaaattagataaagataacctgcaaattttgagggatctctcactgttgcagatc
caaatgagagaccttgaaggttaccgagagacaagataccagcttcttcagttgcgcccc
acacagcgtgcctcctggattggatatgctattgcataccatttgctgaaagattatgat
atggccctaaaactgttggaagaatttagacaaactcagcaagttcctccaaacaaaata
gattatgaatatagtgaattgatattataccagaatcaagtgatgagagaggcagatctg
ttgcaggaatctttggaacatatagaaatgtatgagaaacaaatatgtgataaacttttg
gtggaagaaattaaaggggaaatactgttgaaattgggaagattaaaagaagccagtgaa
gtgttcaaaaacttgattgatcgaaatgcagaaaattggtgttattatgaaggcttggaa
aaagctctacaaattagtgaaagatttagagaactaatggataagttcctgagggttaac
ttcagtaaaggctgcccacccttgtttactactttgaaatctttatattacaatacagaa
aaggtttctataatccaggaacttgttactaattatgaagcctctcttaaaacgtgtgac
ttttttagcccatatgagaatggggagaaggaacccccgacaacactactctgggttcag
tatttcctggcacagcactttgataaacttggacagtattctttggctttggattatatt
aatgctgcaattgctagtactccaactctaatagaattattctatatgaaagcaaaaatt
tacaagcatataggtaatctcaaagaagctgcaaagtggatggatgaagcacagtctttg
gacacagctgatagattcatcaattccaaatgtgcaaaatacatgcttcgagcaaatatg
ataaaagaagcagaggaaatgtgctccaagttcacaagg