GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:58:00

Sequence gi568815585f:49360106_49591833 : 231728 bp : 39.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2346   2546  201  2  0   57   60   168 0.776   9.82
 1.02 Term +   5289   5510  222  2  0   19   38   234 0.991   7.43
 1.03 PlyA +   5848   5853    6                               1.05

 2.04 PlyA -   7861   7856    6                               1.05
 2.03 Term -  13731  13588  144  0  0   70   42   112 0.970   1.73
 2.02 Intr -  17026  16862  165  1  0   64   99   149 0.930  12.84
 2.01 Init -  24113  23991  123  2  0   53   74   115 0.343   6.82
 2.00 Prom -  33060  33021   40                              -6.75

 3.00 Prom +  37133  37172   40                              -3.95
 3.01 Init +  47940  48000   61  2  1   38   88    87 0.963   5.16
 3.02 Intr +  52764  52846   83  1  2   73   92    76 0.535   4.94
 3.03 Intr +  57698  57845  148  1  1   53   58    72 0.287  -0.41
 3.04 Term +  61667  61779  113  0  2   69   47    76 0.131  -0.66
 3.05 PlyA +  61930  61935    6                               1.05

 4.05 PlyA -  62182  62177    6                               1.05
 4.04 Term -  63118  62997  122  2  2   86   42   115 0.579   4.36
 4.03 Intr -  74118  73981  138  1  0   80   94    84 0.203   7.71
 4.02 Intr -  80807  80762   46  2  1   47   89    58 0.104  -1.14
 4.01 Init -  92564  92505   60  2  0   90   98    23 0.039   4.80
 4.00 Prom -  93800  93761   40                              -5.65

 5.00 Prom +  95406  95445   40                              -9.65
 5.01 Init +  95759  95840   82  1  1   61   92    77 0.907   6.58
 5.02 Intr + 100002 100127  126  1  0   46   86   115 0.925   6.83
 5.03 Term + 103916 103962   47  0  2   94   54    36 0.416  -2.81
 5.04 PlyA + 104659 104664    6                               1.05

 6.00 Prom + 112001 112040   40                              -1.05
 6.01 Init + 116492 116934  443  1  2   53   84   199 0.846  11.60
 6.02 Intr + 120114 120230  117  0  0   85   82    25 0.416   0.26
 6.03 Intr + 120842 121011  170  2  2   74  103    47 0.770   3.47
 6.04 Intr + 122632 122857  226  2  1   99   75   112 0.917   7.12
 6.05 Intr + 123359 123458  100  2  1   84   53    36 0.729  -1.11
 6.06 Intr + 128187 128525  339  2  0  -11   82   291 0.029  13.34
 6.07 Intr + 132247 132335   89  0  2   22   84    31 0.202  -6.05
 6.08 Intr + 135794 135990  197  2  2   30   82   136 0.100   5.34
 6.09 Intr + 146515 146651  137  2  2   51  111    40 0.006   1.97
 6.10 Intr + 152954 153061  108  1  0   70  111   141 0.994  14.16
 6.11 Intr + 155738 155768   31  1  1   81  103    10 0.708  -1.41
 6.12 Intr + 163980 164111  132  1  0   78   84    75 0.544   5.80
 6.13 Term + 164808 164911  104  1  2   51   54    95 0.580  -0.14
 6.14 PlyA + 165604 165609    6                               1.05

 7.00 Prom + 168148 168187   40                              -3.75
 7.01 Init + 171180 171280  101  2  2   97   23   111 0.460   5.28
 7.02 Term + 173933 174122  190  2  1   67   38   135 0.416   2.34
 7.03 PlyA + 174174 174179    6                               1.05

 8.14 PlyA - 174345 174340    6                               1.05
 8.13 Term - 177119 177010  110  0  2   77   43    95 0.795   1.59
 8.12 Intr - 180108 179979  130  0  1   68   75    58 0.769   1.85
 8.11 Intr - 180901 180771  131  2  2   98   78    51 0.953   4.59
 8.10 Intr - 181722 181571  152  2  2   85   52   165 0.984  11.49
 8.09 Intr - 184758 184632  127  1  1   83   68   160 0.995  12.32
 8.08 Intr - 186513 186456   58  0  1   97  101    11 0.804   0.84
 8.07 Intr - 186786 186732   55  2  1   14  105    39 0.257  -3.74
 8.06 Intr - 191363 191221  143  2  2   89   88    94 0.915   7.73
 8.05 Intr - 192180 192073  108  0  0  111   98   102 0.990  13.06
 8.04 Intr - 195568 195410  159  1  0  136   78   148 0.999  17.86
 8.03 Intr - 199979 199813  167  0  2   80  107   124 0.999  12.26
 8.02 Intr - 206663 206513  151  2  1   54  116   126 0.996  10.81
 8.01 Init - 207174 207049  126  0  0   78   94   120 0.876  11.83
 8.00 Prom - 220045 220006   40                              -2.35

 9.03 PlyA - 220526 220521    6                               1.05
 9.02 Term - 225802 225630  173  2  2   92   53   106 0.433   4.51
 9.01 Intr - 227239 227111  129  2  0  114   70    16 0.440   2.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  90577  90386  192  1  0   74   48   154 0.884   4.89
S.002 Intr + 128185 128525  341  2  2   27   82   295 0.884  17.07
S.003 Init + 152526 152531    6  2  0   87   94     0 0.847   1.53


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_1|140_aa
MLKNASEPLNRTDQVEERISELADRLFENMQLEETKEKRIKNNEECLRDLGNSLERANLR
LTDLKEEKLLEQNPTSTGNQSKNGQMGPHQIEKLLHSEGYNQQSEEKTYRTQAFYEKVLN
ITDYQRNANQNYNEISSHDS

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_1|423_bp
atgctgaagaatgcatcagagcctcttaacagaactgatcaagtagaagaaagaattagt
gagcttgcagacaggctatttgaaaacatgcagttagaggagacaaaagaaaaaagaata
aaaaacaatgaagaatgcctacgagatctaggaaatagtctagaaagggcaaatctaaga
cttactgaccttaaagaggagaaacttcttgagcaaaaccccacaagcacaggcaatcaa
agcaaaaatggacaaatgggaccacatcaaattgaaaagcttctgcacagtgaagggtac
aatcaacaaagtgaagagaaaacctacagaacacaggccttctatgaaaaggtgctcaac
atcactgattatcagagaaatgcaaatcaaaactacaacgagatatcctctcacgacagt
taa

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_2|143_aa
MESTPAEDEMTTKDLEYYINLADKAVAGFERTDFNFESSSTASEEVSKSLQAMKEILCGT
NEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFETYSSDTEPPPPCLLVHGLHWDSHF
CVTLSTRTVFATPSGMLICELFE

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_2|432_bp
atggaatctactcctgctgaagatgaaatgacaacaaaggatttagaatattacataaat
ttagctgataaagcagtggcaggttttgagaggactgacttcaattttgaaagcagttct
actgcttcagaagaagtgtctaaatcactgcaagcaatgaaagaaattctgtgtggtaca
aacgagaaagaacccccaacagaagcagtggctcagctagcacaagaactctacagcagt
ggcctgctagtgacactgatagctgacctgcagctgatagactttgagacttactccagc
gacacagaacccccacccccatgtctcttggttcatggcttgcactgggacagccacttc
tgtgttaccttgagtacgaggactgtgtttgccacacctagtggcatgttaatttgtgaa
ttgtttgaatga

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_3|134_aa
MNVNLAEESKGKETVGDEIKGGGIQMVMLASQPLTSYCAARFLTGHGQKLKSELKKTLQV
IMLNIQKVRIPTRDGYNEKDILSTGKNVEKLELSNIAGGQLRTGREPSPSGGNEATLSTP
SSSVGGCLLKHRFK

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_3|405_bp
atgaatgtgaatttggcagaagaatcaaagggcaaagaaacagtaggtgatgaaattaaa
ggaggcggaattcagatggtaatgcttgccagccagccactcacctcctactgtgctgcc
cggttcctaacaggccatggacagaaattaaaatctgagttaaaaaaaaccctgcaagtc
attatgctaaatattcagaaagtgagaatacccactagggatggctataatgaaaaagac
atactaagcactggcaaaaatgtagagaaactggaactctcaaacattgctggtggtcaa
ctgagaacagggagagaaccaagcccctctggtggtaatgaggcaaccctgtctaccccc
agcagtagtgttggagggtgcctgctaaaacacagatttaagtaa

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_4|121_aa
MTSKWNVVSWMGSWNGKRHQKTLKTPPKALGTDNFRYPSNIEKKEYQEQSVLSCCSERKD
ANPKSVVCSFFMQEQCTKGEKHLFNLKFCGKDPVICFTCRPGDPDDTNDRASMIYGIVLH
E

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_4|366_bp
atgacaagtaaatggaatgtggtgtcctggatgggatcttggaatggaaaaagacatcag
aaaaccctaaagactccaccaaaggctcttggaactgataacttcagatatccatcaaat
attgagaagaaagaatatcaggagcaaagtgttctaagttgctgttcagaacgtaaagat
gcgaaccccaaatcagtggtttgttcattcttcatgcaagagcaatgcactaaaggagag
aagcatttatttaatctgaaattctgcggaaaggacccagtaatctgtttcacctgccgt
ccaggtgatcctgatgatactaatgatagagcatcaatgatctatggtatagtccttcat
gagtag

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_5|84_aa
MAVQMIVITYVVSLKVYLDEIGGEDHNSDAKTFWMELEDDGKVDFIFEQVQNVLQSLKQK
IKDGSATNKGASQKEVNAQSSGEI

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_5|255_bp
atggctgtacaaatgattgtaataacttatgttgtttcattaaaggtgtacttagatgaa
attggtggtgaagatcacaatagcgatgcaaaaactttctggatggagctagaagatgat
ggaaaagtggacttcatttttgaacaagtacaaaatgtgctgcagtcactgaaacaaaag
atcaaagatgggtctgccaccaataaaggagcatcacagaaagaagtgaatgcccaaagc
agtggtgagatttga

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_6|730_aa
MPLNLKGENPLQLPIKCHFQRRHAKTNSHSSALHVSYKTPCGRSLRNVEEVFRYLLETEC
NFLFTDNFSFNTYVQLARNYPKQKEVVSDVDISNGVESVPISFCNEIDSRKLPQFKYRKT
VWPRAYNLTNFSSMFTDSCDCSEGCIDITKCACLQLTARNAKTSPLSSDKITTGYKYKRL
QRQIPTGIYECSLLCKCNRQLCQNRVVQHGPQVRLQVFKTEQKGWGVRCLDDIDRGTFVC
IYSGRLLSRANTEKSYGIDENGRDENTMKNIFSKKRKLEVACSDCEVEVLPLGLETHPRT
AKTEKCPPKFSNNPKELTVETKYDNISRIQYHSVIRDPESKTAIFQHNGKKMDSSSNHVD
EFEDNLLIESDVIDITKYREETPPRSRCNQATTLDNQNIKKAIEVQIQKPQEGRSTACQR
QQVFCDEELLSETKNTSSDSLTKFNKGNVFLLDATKEGNVGRFLNYFNTCWRSNIWIDKT
LSHQPFEWGEGEALLDSKRQPRFKKTKPSAAGALPGSRYPAATRSCSTVMAQASPPRPER
VLGASSPEARPAQEALLLPTGILLIGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIA
AHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKDKTQLLTLAYATVKVPF
LKKCKEAGLLNYLLEEILDKVHSIPEKLMDETTSESEVSNRLATKRMCHSEIDSVTYAPL
PPPCIPVAKI

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_6|2193_bp
atgccactgaacttgaagggagaaaaccctctgcagctgccaatcaaatgtcacttccaa
agacgacatgcaaagacaaactctcattcttcagcactccacgtgagttataaaacccct
tgtggaaggagtctacgaaacgtggaggaagtttttcgttacctgcttgagacagagtgt
aactttttatttacagataacttttctttcaatacctatgttcagttggctcggaattac
ccaaagcaaaaagaagttgtttctgatgtggatattagcaatggagtggaatcagtgccc
atttctttctgtaatgaaattgacagtagaaagctcccacagtttaagtacagaaagact
gtgtggcctcgagcatataatctaaccaacttttccagcatgtttactgattcctgtgac
tgctctgagggctgcatagacataacaaaatgtgcatgtcttcaactgacagcaaggaat
gccaaaacttcccccttgtcaagtgacaaaataaccactggatataaatataaaagacta
cagagacagattcctactggcatttatgaatgcagccttttgtgcaaatgtaatcgacaa
ttgtgtcaaaaccgagttgtccaacatggtcctcaagtgaggttacaggtgttcaaaact
gagcagaagggatggggtgtacgctgtctagatgacattgacagagggacatttgtttgc
atttattcaggaagattactaagcagagctaacactgaaaaatcttatggtattgatgaa
aacgggagagatgagaatactatgaaaaatatattttcaaaaaagaggaaattagaagtt
gcatgttcagattgtgaagttgaagttctcccattaggattggaaacacatcctagaact
gctaaaactgagaaatgtccaccaaagttcagtaataatcccaaggagcttactgtggaa
acgaaatatgataatatttcaagaattcaatatcattcagttattagagatcctgaatcc
aagacagccatttttcaacacaatgggaaaaaaatggactcaagttcaaaccatgttgat
gagtttgaagataatctgctgattgaatcagatgtgatagatataactaaatatagagaa
gaaactccaccaaggagcagatgtaaccaggcgaccacattggataatcagaatattaaa
aaggcaattgaggttcaaattcagaaaccccaagagggacgatctacagcatgtcaaaga
cagcaggtattttgtgatgaagagttgctaagtgaaaccaagaatacttcatctgattct
ctaacaaagttcaataaagggaatgtgtttttattggatgccacaaaagaaggaaatgtc
ggccgcttccttaattattttaacacttgttggagaagcaatatctggatcgataaaaca
ctgtcccatcaaccatttgagtggggagagggagaagctcttcttgactcaaagcgacag
cccagatttaagaaaacgaaacctagtgcagctggggcacttccgggatctcgctatccg
gccgccacccgcagctgcagcacagtcatggcccaggcgtcgccgccccggcccgagagg
gtgctcggcgccagcagcccggaggcccggcccgcgcaggaggcgctcctccttcccacc
gggatattacttataggtgtctttcaggttgcagaaaagatggaaaaaaggacatgtgca
ctctgccccaaagatgtcgaatataatgtcctatactttgcacaatcagagaatatagct
gctcatgagaattgtttgctgtattcttcaggacttgtggaatgtgaggatcaggatcca
cttaatcctgatagaagttttgatgtggaatcagtaaagaaagaaatccagagaggaagg
aagttgaaagataaaacccaactccttactctggcatatgcaactgtgaaagttcctttt
cttaagaaatgcaaggaagcaggacttcttaattacttacttgaagaaatattagacaaa
gttcattcaattccagaaaaactcatggatgagactacttcagaatcagaggtgtctaac
aggttggccactaagagaatgtgccattcagagattgattcggtcacatatgctcccctg
ccaccgccctgcattcctgttgctaagatctga

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_7|96_aa
MHLKQQSPTFLAPGTGFVEDNFSTDHGDGAVGQGITSPVEHKLDTSSTVPQSTHTEPSSL
ALQFLKAPHLLALAMNSFSRGPSICQNAAVCVTSVK

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_7|291_bp
atgcacctaaagcagcagtccccaacctttttggcaccagggactggtttcgtggaagac
aatttttccacggaccatggggatggggcggttggtcagggaatcacatcacccgtagag
cacaaactggacacatcctcaacagtgccccagagcactcacacagaacccagcagcctt
gcgcttcagttcttaaaggctccacatttactggctttagcaatgaattcctttagcaga
gggccatccatttgccaaaatgctgcagtctgtgtaacttctgtcaaatga

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_8|538_aa
MVDVGKWPIFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQ
STLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQ
VCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHI
KRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVC
GYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERPYACTGPWPVINWVA
RQEMGPSSCRKTSSGLPLILHYEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKA
VLKIRCEHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDL
ATSYCENRLKKLCQHIIKRGITVENAFSLFSAAVRYDAECLAHIRHLINVELDEDSTLKE
ALRMISELKAGMVGFTDSERIKVTLTTGWTELGVVRDLVSSGMCLVGSCDAEAPAHPG

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_8|1617_bp
atggtggatgtcggaaagtggcccatcttcactctactctcccctcaagagatcgcgtct
attcggaaggcgtgtgtcttcggcacctcagccagtgaagcactgtacgttactgacaat
gatgaggtctttgtatttggactgaactatagtaactgtctaggaactggagataaccag
agtacacttgtacccaaaaagctagaaggcttatgtggaaagaagattaaaagcctcagt
tacgggagtggaccacatgttcttctcagcaccgaagatggagtggtttatgcctggggc
cacaatggatatagccagcttgggaatgggacgaccaaccaaggcattgctcccgtccag
gtctgtaccaatctcttgatcaagcaagtggtggaagtagcttgtggctcacatcattca
atggctctggcagctgatggagaggtgtttgcttggggttataacaactgtggccaagtg
ggatcaggttctacagcaaatcaaccaactcctcgaaaagttacaaactgtttacatatt
aagagggtagttggcattgcctgtggtcagacttcatccatggctgttctggacaatggc
gaggtatatggctggggttacaatggcaacggtcagctgggcctgggaaacaatggcaac
cagctgacccctgtgagagtggcagctttgcacagcgtgtgtgtgaaccagattgtctgc
ggttacgcacatactctagcactaacagatgagggcttgctgtatgcctggggagctaac
acatatgggcagctgggaactggcaataaaaataacctgctaagcccagcacacatcatg
gtggagaaagaaaggccatatgcctgtactggtccgtggcctgttattaactgggttgca
cggcaggagatggggccgtccagttgtaggaaaacaagctcaggactcccactgattcta
cattatgagcatgaagactttttaacagttgcagagtcactgaagaaagaatttgatagt
ccagaaactgctgatctgaagtttcgaattgatggaaaatatattcatgtccataaagct
gttttgaaaatcaggtgtgagcattttcgatccatgttccagtcgtattggaatgaagac
atgaaggaagtgatagaaatcgatcagttttcttacccagtgtatcgtgcctttctccag
tacctctacacagacacagtcgacctgccgccagaagatgctataggtcttctggatttg
gcgacatcttactgtgaaaacagactgaaaaaactttgtcagcacattatcaagagagga
attactgtggagaatgccttttcgctattctctgctgcagtcagatatgatgcagagtgc
ctggcacatattaggcacctgataaatgttgaactggatgaagatagtaccttaaaggaa
gcattaaggatgatcagtgagctgaaggcgggtatggttggtttcacagattcagagaga
ataaaagttactttaacaacaggttggacagagttaggtgtggttcgtgatcttgtgtca
tctggaatgtgtcttgtggggagctgtgatgccgaggcacctgctcaccctggttag

>gi568815585f:49360106_49591833|GENSCAN_predicted_peptide_9|100_aa
XMFTQVLLIGLQPKETDFSFFEQNRPLLVNSLNCHYFGQATSFSLWGGRPTLPTAKPSRG
AEQEPVPRAFLVPQTQKPLSPGSSHRISWGHSSGRASGRA

>gi568815585f:49360106_49591833|GENSCAN_predicted_CDS_9|303_bp
nacatgtttacacaagttcttttgatcgggttgcaaccaaaagaaactgattttagtttc
tttgagcaaaacaggcctcttctagtaaattcactcaactgccactactttgggcaagcc
acttcattcagtctctggggtggtaggccgaccctccccacagccaagccatctcgggga
gcagagcaggagcccgtgcctcgcgcgttcctggttcctcagacacaaaagcctctaagt
cccggcagcagccaccggatttcatggggacactccagtggcagggcctcggggcgggcc
tga