GENSCAN 1.0	Date run:  7-Nov-116	Time: 19:14:41

Sequence gi568815590r:51720354_51961151 : 240798 bp : 38.89% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     28     23    6                               1.05
 1.03 Term -   1804   1689  116  2  2   20   43   175 0.377   3.95
 1.02 Intr -   3397   3322   76  1  1   73   39   123 0.563   4.07
 1.01 Init -   6070   6011   60  1  0  105   69    15 0.368   2.60
 1.00 Prom -   7960   7921   40                              -2.85

 2.02 PlyA -  10744  10739    6                               1.05
 2.01 Sngl -  11335  11006  330  1  0   35   53   218 0.568   8.77
 2.00 Prom -  21026  20987   40                              -4.85

 3.00 Prom +  26100  26139   40                              -4.85
 3.01 Init +  32532  32673  142  2  1   45    7   153 0.485   3.25
 3.02 Intr +  33976  34094  119  2  2   67   85   122 0.670   9.06
 3.03 Intr +  46578  46611   34  2  1  107   35    36 0.006  -2.92
 3.04 Intr +  52293  52406  114  1  0   74   77    84 0.261   5.40
 3.05 Term +  56107  56213  107  2  2   94   40    69 0.398   0.29
 3.06 PlyA +  57046  57051    6                               1.05

 4.04 PlyA -  58206  58201    6                               1.05
 4.03 Term -  59071  58914  158  2  2   69   44    71 0.253  -2.09
 4.02 Intr -  59403  59187  217  0  1   71   95    45 0.513   0.65
 4.01 Init -  61720  61535  186  1  0   53   81   121 0.582   7.01
 4.00 Prom -  69136  69097   40                              -5.45

 5.05 PlyA -  69549  69544    6                               1.05
 5.04 Term -  70327  70167  161  2  2   98   48    92 0.256   3.32
 5.03 Intr -  72889  72730  160  1  1   62   60   107 0.169   3.94
 5.02 Intr -  75598  75526   73  0  1   58   89    51 0.119   0.69
 5.01 Init -  88991  88828  164  2  2   97   84   133 0.400  11.05
 5.00 Prom -  99456  99417   40                              -7.05

 6.07 PlyA -  99837  99832    6                               1.05
 6.06 Term - 100365  99998  368  1  2   83   32   285 0.996  16.18
 6.05 Intr - 111214 111091  124  1  1   84   94   102 0.993   9.64
 6.04 Intr - 113336 113165  172  1  1   86   93    65 0.701   5.82
 6.03 Intr - 125410 125308  103  2  1   53   97   111 0.966   6.81
 6.02 Intr - 136949 136851   99  0  0   83   99    81 0.951   7.86
 6.01 Init - 140798 140492  307  2  1   62   59   268 0.945  18.80
 6.00 Prom - 153955 153916   40                              -4.95

 7.00 Prom + 158828 158867   40                              -5.65
 7.01 Init + 163246 163297   52  0  1   36   95    25 0.143  -0.63
 7.02 Intr + 166072 166205  134  2  2   44   49    93 0.155   0.44
 7.03 Term + 178402 179058  657  0  0  101   49   348 0.976  25.16
 7.04 PlyA + 180744 180749    6                               1.05

 8.00 Prom + 185833 185872   40                              -4.15
 8.01 Init + 187137 187194   58  2  1   65   80    -5 0.290  -2.01
 8.02 Intr + 194071 194213  143  2  2   75   78   155 0.873  12.35
 8.03 Intr + 204344 204606  263  1  2   91   78    47 0.051  -0.64
 8.04 Term + 214829 214952  124  2  1   45   43   174 0.736   5.48
 8.05 PlyA + 215031 215036    6                               1.05

 9.05 PlyA - 215611 215606    6                               1.05
 9.04 Term - 222110 221932  179  0  2   57   55   165 0.813   6.97
 9.03 Intr - 222646 222536  111  2  0   78   78   101 0.803   7.53
 9.02 Intr - 226503 226431   73  0  1   76   86    57 0.259   2.36
 9.01 Init - 229361 229290   72  2  0   72   29    71 0.244   0.72
 9.00 Prom - 233191 233152   40                              -5.45

10.03 PlyA - 233526 233521    6                               1.05
10.02 Term - 234135 234037   99  0  0  103   43   101 0.852   4.25
10.01 Intr - 237816 237736   81  0  0   75   94    32 0.623   1.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  94417  94605  189  0  0   58   38   181 0.877   4.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_1|83_aa
MGLSMNSISLGFTKPKVKWDETAPPRSEELCRPAGAPAAQGPPSAATIMNQGKLSRLQAP
VCIGEKATACGRKKVVRRTAAAD

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_1|252_bp
atgggcctttcaatgaattccatttctcttgggtttaccaagccaaaggtgaagtgggat
gaaacagccccacctcgctcagaggaactttgtcgacctgctggtgctcccgcagcccag
ggcccaccttcggcagcaacaatcatgaaccagggaaagctcagccgactgcaggcacca
gtgtgcattggtgagaaagcaactgcttgcggaaggaagaaggtggtccgtagaacagca
gcagcagattag

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_2|109_aa
MYENAWVSRHRCAAGQSPNGEPLLGQCKRECGMGTPTQSPSGAVRRGPPSSGPQNGSSTD
SLHYVPGKAADTQRQFLKATRRGLYPAKPQGWSCLRPWKSTSCISVTWM

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_2|330_bp
atgtatgaaaatgcctgggtgtccaggcataggtgtgctgcagggcagagccctaatgga
gaacctctgctaggacagtgcaaaagggaatgtggaatgggaacccccacacagagtcct
agtggagctgtgagaagagggccaccgtcctccggaccccaaaatggtagttccacggat
agcttgcactatgtgcctggaaaagctgcagacactcaacgccagttcctgaaagcaacc
aggagggggctgtaccctgcaaagccacaggggtggagctgcctaagaccatggaaatcc
acctcttgcatcagtgtgacctggatgtga

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_3|171_aa
MSIHGAYPWAQMSTNGVAVMSQIKTKVSARILGKGFVATANMRLPPAGAVDPIAGGSEST
QKKPTTGGSPDEKPAQGQGKSHGFWLKNYDHVYVGALDGWGDPVSLGLYEVCVEGGKEEE
AEDMGLRQGSMGLSCKGQPTLREIEKNLREIALNYRGLVSPNNPDKVSILD

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_3|516_bp
atgagcatccatggggcatacccatgggcacaaatgtctacaaatggggtggctgtgatg
tctcagatcaagaccaaggtgtctgccagaatcctggggaaaggcttcgtggcgactgcc
aacatgcggctgcctccagccggggctgttgatcccattgcgggtggttctgagagcaca
caaaagaaacccaccactggaggcagccccgatgagaagcctgcccaagggcaggggaaa
agccatggcttctggctgaagaactatgatcatgtgtatgttggtgcccttgatggctgg
ggtgacccagtgtctctagggttgtatgaagtctgtgtggaaggtgggaaggaggaagag
gctgaagacatggggctgagacaaggtagcatgggtctgtcctgcaaaggccagccgaca
cttagagaaatagaaaagaacctacgtgaaatagcattgaattatcgggggctggtttcc
cccaataaccctgacaaagtctctatccttgactaa

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_4|186_aa
MGREQPPYCVLSKFLTYTVVNCVAAGHLNTCGEEAIAKDELEVTMRRMGRYSGQEQPWPK
LALKRDEDSQLLCGSLLVTKNMHNCQSGIHEIEFMGTHTWWTRTGSCVPSALPVSAHPFF
LLPGPNFSGHRLSPGVPDIWDFCDRLFGLDGSSHSDTLETHIGAHRDFASPSDHDMCGLP
LHTALA

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_4|561_bp
atgggcagagaacagccaccctactgtgttttgtccaaattcctgacctacactgtggtt
aactgtgtagcagcaggtcatttgaacacatgtggtgaggaggccatagctaaggatgaa
ctggaagtcaccatgaggaggatggggcggtattctgggcaggagcagccttggccaaag
ctggcgctgaaaagggatgaagacagccaactattatgtggcagccttctggttaccaag
aacatgcacaattgtcagagcggaatccatgagatagaatttatgggcacacatacttgg
tggaccagaactgggagctgcgtgccatcagcactccctgtctctgctcatcctttcttt
ctgctgcctgggcctaacttctctgggcacaggctttctccaggggttcccgacatctgg
gatttttgtgacaggttgtttggattggatggcagttctcactcagataccctggaaact
cacataggtgcccacagggacttcgcctcgccgtcagatcatgatatgtgtggccttccc
ttgcacacagccttggcctag

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_5|185_aa
MEPRLFCWTTLFLLAGWCLPGLPCPSRCLCFKSTVRCMHLMLDHIPQVPQQTTVLPTFDH
LRVHDVSLQGRGDQVNYPQSDPSFIGLLWFPGGPLQTWVPRASVISGGYRTAKMAAAPSP
GLSVPEGHQPDAGPSLAHQGGQCRRELRLRHGPTCSLGKKGILESLCLIEKIMLPLVAPG
CQKRK

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_5|558_bp
atggagcccagactgttctgctggaccactctctttctcctggccgggtggtgcctgcca
gggttgccctgccccagccggtgcctttgctttaagagcaccgtccgctgcatgcacttg
atgctggaccacattcctcaggtaccacagcagaccacagttctaccaacctttgatcat
ttgcgggtgcacgatgtctctctccagggtcggggtgaccaggttaattacccacagtca
gacccctctttcatagggctgctgtggtttcctgggggtccactccagacctgggtccct
cgtgcaagtgtcatcagtggaggttacagaacagcaaagatggctgccgctccttcccct
gggctgtctgtcccagaggggcaccaacctgatgccggcccttccctcgcccatcaggga
ggacagtgtcgcagagagctgcgactccggcatgggcccacgtgtagcctagggaagaaa
gggatcctggaatctctgtgcctcatagaaaaaataatgctgcccttagttgctcctgga
tgccagaagagaaaataa

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_6|390_aa
MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN
IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILVNRSDSGETASAIQHCGC
HYLAATTFIPKGEIIGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVV
GNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWE
SKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKG
IPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHNEAMKPE
EPPQNLLREKIMKLPLPESLKAYLTYFRDK

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_6|1173_bp
atgggaggagctgtgagtgctggggaagataatgatgacttaattgataatttaaaagaa
gctcagtatattcgtactgaaagagtggagcaagccttcagagcgattgatcgtggagat
tactatttggaaggctacagagacaatgcttacaaagacttagcctggaagcatggaaac
atccacttgtcagcaccttgcatttattctgaagttatggaagcattgaaacttcaacca
ggattgtcttttcttaacctgggaagtggaaccggatatttaagtacaatggtgggctta
attttagttaataggagtgactctggggagactgctagtgccatccagcactgtggatgc
cactaccttgctgctacaacattcattcctaaaggtgaaataattggtccttttggaata
aatcatgggattgagcttcattcagatgtggtggaatatgccaaggaaaaactggagagc
ttcatcaaaaatagtgatagctttgataaatttgagttctgtgaacctgcatttgttgtt
ggtaattgcctccagatagcttctgacagtcatcagtatgatcgaatttattgtggagct
ggagtgcagaaagaccatgaaaactacatgaaaatattactaaaagttggaggcatatta
gtcatgcctatagaggatcagttaacacagattatgcgaactggacagaacacttgggaa
agtaaaaatatccttgctgtttcatttgctccacttgtgcaaccaagtaagaatgataat
ggcaaaccagattctgtgggactccctccctgtgctgtcaggaatctacaggacttggct
cgtatttacattcgacgcacacttagaaatttcataaatgatgagatgcaggccaagggg
attcctcaaagggctccacccaaaaggaaaagaaagagagttaaacagagaattaacact
tacgtatttgtgggtaatcagcttattcctcagcctctagacagtgaagaggatgaaaaa
atggaagaggataacaaagaagaggaggaaaaagatcacaatgaagcaatgaagccagag
gagccacctcaaaatttactgagagaaaaaatcatgaagctgcccctccctgaatcttta
aaagcttacttgacatattttagagacaaataa

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_7|280_aa
MPDIFKTCSESQTENNQDYCNELQDDHTCSYPNFNGIPICHFDSSAQYTTFINKESSSKN
PQRLSFLAPDLPALKSPCPRLFGCRPPGPLASKRIPVARPALARGTRTPHDPEPPLAAAL
PVARAAARRPGARTRRGPQQPDAATTTITTRTPPPSGEAGPGPATGAARASRTPEPPGSG
HAQRTTGTGAAPRGRQSQQGRETPPSGPAPLRARSAPKPKQREALTGQKTMAVGEITREH
GLHLSSPPPSPRSRTGAGVQAFSGLRATACRCLAAQSPLH

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_7|843_bp
atgcccgatatttttaaaacgtgttcagaaagtcaaactgaaaacaaccaagattactgc
aatgaacttcaagatgatcatacctgtagttatcccaatttcaatgggattcctatatgc
cattttgattcatctgcccagtatacaacttttatcaataaagaaagcagctccaaaaat
ccacagcgcctcagtttcctggcccccgacctgcccgcccttaagtccccctgcccccga
ctcttcggctgccgtccccctggccctctggcctccaagcgcatcccagtcgcccgcccg
gccctagcacgcgggactcgcacaccccacgaccccgagcccccactggcggcggcgtta
cctgtggcgcgggcagcggcgcgcaggccaggcgctaggactcggcggggtccgcagcag
ccagacgccgctaccaccacaataacaacacggacgccaccgccgagtggagaggcgggg
cccggacccgcgactggagcagccagagcctcccggactccggagccgccggggtccggg
catgcgcagagaaccacgggcacaggggcagctccccgcggacgccaaagtcaacaaggc
cgggagacgcccccatctggccccgcccccctcagggctcgctccgcccccaagcccaaa
caacgcgaggccttgacaggccagaagacgatggcggtaggggagatcacgcgagagcat
ggcctccacctctcctccccaccgccatctccacgttctcgcaccggcgctggggtgcag
gctttcagtggtctcagggctacggcttgtcggtgcctcgccgcacagtcccctttgcat
tga

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_8|195_aa
MAHITSVHVHMAHTACRGTVFPDDMGICDDMGICDMGIPDDMGIWLCVPTQISSQIVIPV
CPRRDQMSLNPLSLPKHRLKLFSEVPLSAQSPDLPKKKTIISDFFPEFSLTELFTETPGI
LSRTCCSMYRMPITDSMSIAREEGFIGCSVEENRSNITGIYPNHCDANPTKAPDGKASIS
GIQFGDLPCEEDEAI

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_8|588_bp
atggcacacatcacttctgtccacgttcatatggctcacactgcctgcagggggacagta
ttccctgatgatatgggaatctgtgatgatatgggaatctgtgatatgggaatccctgat
gatatgggaatatggctctgtgtccccacccaaatctcatctcaaattgtgatccccgtg
tgtccgaggagggaccaaatgtctctcaatcctctgtctctcccaaaacacaggctaaag
ttgttctctgaagttcccttgtctgcccaaagtccagacctaccaaagaagaaaacaatt
atctctgatttcttccctgagttttcattaactgaactttttactgaaacaccagggatt
ctgtctaggacttgctgctccatgtacagaatgccaatcactgactcaatgagtattgcc
agggaagaaggctttattgggtgctcagtggaggagaacaggagtaacatcacggggatt
tacccaaaccactgtgatgccaatccaaccaaagctcctgatggaaaagcttcaatctca
ggaattcagtttggcgacttgccctgtgaagaagatgaagctatatag

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_9|144_aa
MKKLYSHIDPITLWESSNWLLEFGHHGSLELGRRKQQHKKEGGKEVREGPQRFAVSGEGT
RDNTISGAVGAMKAEKEVPRQGVLRDLYAFSPTYLPFASSFFSESSEGEGEVFSCGPYMA
KHHALSGMHSASERLAAMAQDATL

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_9|435_bp
atgaagaagctgtattctcatattgatcccattactctgtgggagtcttcaaactggctg
ctggaatttgggcaccatgggagtttagagctgggaaggagaaagcagcaacacaagaaa
gaaggtggtaaggaagtgagagaaggacctcaaagattcgcagtgagtggagaggggacc
agggacaatacaatttcaggagcagtaggggccatgaaagcagagaaggaagtgcccagg
caaggcgtcctacgagatctatatgccttttctccaacatatctgccttttgcgagttca
ttttttagtgaatcttcagagggtgaaggagaagttttttcctgtggcccatatatggcc
aagcatcatgccctgtcaggcatgcacagcgcatctgagcgactcgcagcaatggctcag
gatgccacactctga

>gi568815590r:51720354_51961151|GENSCAN_predicted_peptide_10|59_aa
VTPLNNVGVRGLTPTLADFVIWPHGGQAVAAFRDQRPLQAWSKITQAAAFSMALNSMYT

>gi568815590r:51720354_51961151|GENSCAN_predicted_CDS_10|180_bp
gtcactcctttgaacaatgtaggagttagaggactaactcctacacttgcggattttgtc
atctggcctcacggtggccaggctgttgcagccttcagagatcagcgtcctctgcaagcc
tggagcaagattactcaggcagcagcgttttctatggcgctaaattccatgtacacatag