GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:56:10

Sequence gi568815596r:223497432_223699282 : 201851 bp : 39.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1358   1455   98  1  2  105   62   148 0.423  13.73
 1.02 Intr +  16716  16843  128  0  2   55   97    52 0.012   2.20
 1.03 Intr +  28486  28629  144  2  0   75   66    47 0.112   0.53
 1.04 Intr +  32216  32334  119  0  2   56  103    65 0.749   4.06
 1.05 Intr +  33426  33486   61  2  1   57   81    34 0.035  -3.01
 1.06 Intr +  35223  35390  168  1  0   38   62   100 0.079   1.40
 1.07 Intr +  45068  45661  594  0  0   21   64   236 0.107   6.11
 1.08 Term +  51786  51967  182  1  2   67   37   147 0.437   4.29
 1.09 PlyA +  53766  53771    6                               1.05

 2.06 PlyA -  54878  54873    6                               1.05
 2.05 Term -  57323  57119  205  1  1   69   41   116 0.024   0.86
 2.04 Intr -  60093  60013   81  2  0   74   71    64 0.012   1.13
 2.03 Intr -  83010  82861  150  2  0  113   64    21 0.007   0.56
 2.02 Intr -  89041  88927  115  2  1   49   48   122 0.060   2.89
 2.01 Init -  91971  91917   55  0  1   72  101    54 0.658   6.60
 2.00 Prom -  95437  95398   40                              -3.45

 3.02 PlyA -  98692  98687    6                               1.05
 3.01 Sngl - 101851  99998 1854  1  0   93   43  2121 0.999 199.89
 3.00 Prom - 111446 111407   40                              -4.85

 4.02 PlyA - 111693 111688    6                               1.05
 4.01 Sngl - 116170 115895  276  1  0   81   55   208 0.960  11.72
 4.00 Prom - 116274 116235   40                              -8.45

 5.00 Prom + 116462 116501   40                              -5.55
 5.01 Init + 117665 117820  156  1  0   74   75   127 0.995   9.96
 5.02 Intr + 118044 118171  128  2  2   50   75    62 0.992  -0.34
 5.03 Intr + 121461 121575  115  0  1   86   50   155 0.959  11.03
 5.04 Term + 122129 122314  186  1  0   68   44   160 0.939   6.11
 5.05 PlyA + 122384 122389    6                              -0.45

 6.00 Prom + 123124 123163   40                              -9.55
 6.01 Init + 123908 124010  103  1  1   99  109    13 0.576   4.95
 6.02 Term + 128626 128804  179  2  2  -56   39   496 0.284  27.17
 6.03 PlyA + 131534 131539    6                               1.05

 7.00 Prom + 135668 135707   40                              -5.95
 7.01 Init + 139774 139846   73  0  1  101   31    68 0.501   3.68
 7.02 Intr + 150800 150973  174  0  0   78   26   135 0.033   5.29
 7.03 Intr + 152055 152131   77  1  2   29  103    32 0.043  -2.88
 7.04 Intr + 153764 153861   98  1  2  103   74    82 0.966   6.19
 7.05 Intr + 156366 156557  192  0  0  117   61   113 0.938   9.19
 7.06 Intr + 159881 159992  112  2  1  126   92    14 0.802   5.06
 7.07 Intr + 189811 189918  108  0  0   48   40    95 0.025   0.26
 7.08 Intr + 192111 192345  235  2  1   69  100    60 0.019   1.64
 7.09 Term + 198340 198632  293  2  2  105   40   119 0.009   3.32
 7.10 PlyA + 200667 200672    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   1729   1801   73  1  1  104   37    92 0.897   2.10
S.002 Term -  83784  83687   98  1  2  104   42    95 0.894   3.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_1|497_aa
MAQLEGVEMTVRVDSEGVPSTGGYASISRMGGRQPLLVWPQGAKTFLYFRTKGFMGSMGL
PSSCCQMEKKTNKVVGGISGPCPPVKILLNPKVLRCEDSYPLMFGVCHKVGTEGIPSTHI
QSAGGGDIISIVYLLLMTIPLQAIPGQLWILKVHYILPRLQIQCSSNLILLGHWTRAQDP
PSSVSNDFEASLVKNGVFSSYSSKTGTVVGKQVAVEITEEEEMESDIAEGEGPYLNLNFD
LFGHKGQQQKPAIAFQERRCKMPLRSHTPALCLVRSSCFYVKFICLKYLLYVIITWLVGL
CHRNCLSKHDEHQREDERIFGRTETPLQNTPVLRGTASVCENLRNKYWLHKQEHDGTKCY
SSLLPSCLVFGIESQNKRPSLKSSPIEVTGITIIGVPQTLPTQPCQLLTISCNQLTQSYP
LSKIIYFFFQQLFSLHILILITYQVQKLIIRFLRFQETRPTLSSFPSSDSHTKPLRQQRR
TYWYQQLQADSSKNVHN

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_1|1494_bp
atggcccagttagaaggtgtggaaatgacagtgcgtgtggacagtgaaggtgtgcccagt
acaggagggtatgccagcatctccaggatgggtggccgccagcccctattggtatggccc
caaggagccaaaacatttctatacttcagaaccaaaggattcatgggatccatgggattg
ccaagttcctgttgccagatggagaaaaaaacaaacaaagtggttggaggtatatctggg
ccctgtcccccagtgaaaattctgcttaatcccaaagtcttgagatgtgaggattcctac
ccactgatgtttggtgtctgtcataaggtaggcactgaaggcatcccctcaacacacatc
cagagtgcaggtggtggtgacatcattagtattgtctatttgctgctgatgaccatcccc
ttacaggcgatccctggacagctgtggattttgaaagttcattatattctcccaaggttg
caaattcagtgttccagcaacctcattcttcttggacactggacaagagctcaggaccca
ccaagttcagtttcaaatgattttgaagcttctctagtcaagaatggagtcttctcttcc
tattcctccaagacagggacagtggtagggaagcaagtggctgtagagataacagaagaa
gaagagatggaaagtgacatagcagaaggggagggcccatatttgaatttgaattttgat
ctttttggccacaaaggccaacagcaaaagccagccatcgcgttccaggaacggaggtgc
aaaatgccgctcagatcacacactcctgccttgtgtttggtgagaagcagctgcttctat
gtcaagtttatctgtttgaaatatttactgtatgtaattatcacttggctggtgggcctt
tgccatagaaactgtcttagcaaacacgatgaacaccagcgggaagatgagcgcatattt
ggaaggacagaaacccctctgcaaaacaccccagtcttgagaggaacagcttctgtgtgt
gaaaacttgagaaacaagtactggttacataaacaggaacatgatggaaccaaatgctat
tccagccttttgccatcatgcttggtttttggcatagagagccagaataaacgtcccagt
ctaaagagctcaccaattgaggtaactggaattacaattataggagttcctcagaccctt
cctactcagccctgccagcttctgaccataagctgcaaccaactaactcagtcctatcca
ctttctaagataatttatttcttctttcaacaattattttcactacatatattgattttg
atcacataccaagttcaaaaacttattattcggtttctaagatttcaggaaacaaggcca
actttatcctcatttccatcatctgactcacacaccaagcccctgaggcagcaacgccga
acatattggtatcagcaattacaggctgactcatccaagaacgtgcacaattaa

>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_2|201_aa
MRKLTIMAESKGGAGVSHAILGKWFVMKQQVLIPSVMGYNLTGAISRELECLEARGWCFG
KMMAGEELEARSLIYFLWTCTLAQCFSHLTVHTSHLEILLECISWARTAQSKGDNGHLYH
LTDFYERASNVLPSLGGCVHVKNNLAKGLCAKIRKRGMRSHWLLGGLIYASRSMDQVSSH
WEGTAGTTTPSLEVQQQGKMR

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_2|606_bp
atgaggaagcttacaatcatggcggaaagcaaagggggagctggtgtgtcacatgctatt
ttgggaaagtggtttgtaatgaagcaacaagttctgattccatctgtcatgggatacaat
ttaactggggccatttcacgggaattggaatgtttagaagcccgtgggtggtgctttgga
aagatgatggcaggagaggagcttgaggctaggagcctgatttacttcctgtggacttgc
accctagcccagtgcttctcacacttgactgtgcacacgagtcacctggaaatcttgtta
gaatgcatatcctgggccaggactgcccagagcaaaggtgacaatggccatctttatcac
cttactgatttttatgaacgtgcttcaaatgttttacctagcctgggtggatgtgtacat
gtgaagaataatcttgcaaaagggctttgtgcaaaaataaggaaacgggggatgagaagt
cactggctgctaggtggccttatctatgccagccgttccatggatcaagtatcaagccac
tgggaagggacagcaggcacaaccacgccatccttagaggtccagcagcaaggaaaaatg
agatga

>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_3|617_aa
MAEAKTHWLGAALSLIPLIFLISGAEAASFQRNQLLQKEPDLRLENVQKFPSPEMIRALE
YIENLRQQAHKEESSPDYNPYQGVSVPLQQKENGDESHLPERDSLSEEDWMRIILEALRQ
AENEPQSAPKENKPYALNSEKNFPMDMSDDYETQQWPERKLKHMQFPPMYEENSRDNPFK
RTNEIVEEQYTPQSLATLESVFQELGKLTGPNNQKRERMDEEQKLYTDDEDDIYKANNIA
YEDVVGGEDWNPVEEKIESQTQEEVRDSKENIEKNEQINDEMKRSGQLGIQEEDLRKESK
DQLSDDVSKVIAYLKRLVNAAGSGRLQNGQNGERATRLFEKPLDSQSIYQLIEISRNLQI
PPEDLIEMLKTGEKPNGSVEPERELDLPVDLDDISEADLDHPDLFQNRMLSKSGYPKTPG
RAGTEALPDGLSVEDILNLLGMESAANQKTSYFPNPYNQEKVLPRLPYGAGRSRSNQLPK
AAWIPHVENRQMAYENLNDKDQELGEYLARMLVKYPEIINSNQVKRVPGQGSSEDDLQEE
EQIEQAIKEHLNQGSSQETDKLAPVSKRFPVGPPKNDDTPNRQYWDEDLLMKVLEYLNQE
KAEKGREHIAKRAMENM

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_3|1854_bp
atggctgaagcaaagacccactggcttggagcagccctgtctcttatccctttaattttc
ctcatctctggggctgaagcagcttcatttcagagaaaccagctgcttcagaaagaacca
gacctcaggttggaaaatgtccaaaagtttcccagtcctgaaatgatcagggctttggag
tacatagaaaacctccgacaacaagctcataaggaagaaagcagcccagattataatccc
taccaaggtgtctctgtcccccttcagcaaaaagaaaatggcgatgaaagccacttgccc
gagagggattcactgagtgaagaagactggatgagaataatactcgaagctttgagacag
gctgaaaatgagcctcagtctgcaccaaaagaaaataagccctatgccttgaattcagaa
aagaactttccaatggacatgagtgatgattatgagacacagcagtggccagaaagaaag
cttaagcacatgcaattccctcctatgtatgaagagaattccagggataacccctttaaa
cgcacaaatgaaatagtggaggaacaatatactcctcaaagccttgctacattggaatct
gtcttccaagagctggggaaactgacaggaccaaacaaccagaaacgtgagaggatggat
gaggagcaaaaactttatacggatgatgaagatgatatctacaaggctaataacattgcc
tatgaagatgtggtcgggggagaagactggaacccagtagaggagaaaatagagagtcaa
acccaggaagaggtgagagacagcaaagagaatatagaaaaaaatgaacaaatcaacgat
gagatgaaacgctcagggcagcttggcatccaggaagaagatcttcggaaagagagtaaa
gaccaactctcagatgatgtctccaaagtaattgcctatttgaaaaggttagtaaatgct
gcaggaagtgggaggttacagaatgggcaaaatggggaaagggccaccaggctttttgag
aaacctcttgattctcagtctatttatcagctgattgaaatctcaaggaatttacagata
cccccagaagacttaattgagatgctcaaaactggggagaagccgaatggatcagtggaa
ccggagcgggagcttgaccttcctgttgacctagatgacatctcagaggctgacttagac
catccagacctgttccaaaataggatgctctccaagagtggctaccctaaaacacctggt
cgtgctgggactgaggccctaccagacgggctcagtgttgaggatattttaaatctttta
gggatggagagtgcagcaaatcagaaaacgtcgtattttcccaatccatataaccaggag
aaagttctgccaaggctcccttatggtgctggaagatctagatcgaaccagcttcccaaa
gctgcctggattccacatgttgaaaacagacagatggcatatgaaaacctgaacgacaag
gatcaagaattaggtgagtacttggccaggatgctagttaaataccctgagatcattaat
tcaaaccaagtgaagcgagttcctggtcaaggctcatctgaagatgacctgcaggaagag
gaacaaattgagcaggccatcaaagagcatttgaatcaaggcagctctcaggagactgac
aagctggccccggtgagcaaaaggttccctgtggggcccccgaagaatgatgatacccca
aataggcagtactgggatgaagatctgttaatgaaagtgctggaatacctcaaccaagaa
aaggcagaaaagggaagggagcatattgctaagagagcaatggaaaatatgtaa

>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_4|91_aa
MSGFASEAPALVPPKPAASPASCSSPIRKRHKSIMTFKALFLSLIRAEPEDDCNERLRLC
ECVMCKLLPPCPSMRGCAETLMIKTVNLALG

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_4|276_bp
atgtcggggtttgcgtctgaggcccccgccctggttcctccgaaaccggctgcatcacca
gcatcgtgtagttctcccatcaggaaaagacacaaaagcatcatgacatttaaagccttg
ttcctgagtctcattagggcagagcccgaggatgactgtaatgaacggctgcgcctctgt
gaatgtgtaatgtgcaaactgctcccgccgtgcccctccatgcggggctgtgcggagaca
ctgatgattaaaaccgtgaacctggccttgggctga

>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_5|194_aa
MERDPVSKKNKERIEAFASSQSLSKSAALRRAFFSCPKRRAGCSRTLNVTHRDIPDLGAL
ELSSHSSHQVVTIGHSANDFSGFLGCGKIKWQNEGPRSTASPGGAAAQDVDAANREMLQT
GTVDLDCPPKLVKLRPWLPELREEDWGWRMGVRDSPGRQHIGSQERQMQSYLGGSLSSDT
RNQECGKTGGVPHG

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_5|585_bp
atggagcgagatcctgtctcaaagaaaaacaaagaaagaatagaagcatttgcttcatct
caatctctcagcaagtctgcagctttacgcagagctttcttcagttgtccgaagagaaga
gcaggctgctcccggaccctgaacgtgacccacagggatattcctgatcttggggctttg
gaattaagttctcatagctctcatcaagtagtcacaataggacactcagctaatgacttt
tcaggatttcttggatgtggaaagataaagtggcaaaacgaaggcccaaggagcacagcc
agccctggaggagctgcagcccaagatgttgatgctgcaaacagggagatgctgcaaaca
gggacagtcgaccttgactgtcctcccaaactagtgaagctgagaccatggctacctgag
ctgagagaggaagactggggctggcggatgggagtaagggatagtcctggccgccagcac
ataggcagtcaggagaggcaaatgcagtcatacctgggtggcagcctgtctagtgacact
cgaaaccaggaatgtggcaaaactggtggtgttcctcatggctag

>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_6|93_aa
MACSHRPDDTTCMGTDLAHRWMGIQHSSKIGERPEEEEEEKGEGEGEEEEEEEEEEEEEE
EEEEEEEEEEEEGEGEGEGEGEEKQRVKMKVFE

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_6|282_bp
atggcctgcagtcacagaccagatgacacaacttgcatgggaacagacctggcacacagg
tggatgggtatccagcactcctctaagataggggagaggccagaagaagaagaagaagaa
aaaggagaaggagaaggagaggaagaggaagaggaagaggaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaaggagaaggagaaggagaaggagaa
ggagaagaaaaacagagggtgaaaatgaaggtgtttgaatag

>gi568815596r:223497432_223699282|GENSCAN_predicted_peptide_7|453_aa
MTSLNADLGRRGHNWLLRAHASGCGCFVSGNLSDITAPDPRLLHSCDISTKHKTQRFTTT
GEESVRELRGVRWSIKTMHQTEKTAMHRPCTMPGVRRTASPTFNKAYQNPELSGWSYQTM
QQPYGTELEFQFVTGYYFFPRVQPAPVIKLGLFPSLSNLDHRIHPASKIQPISSSRIDTF
DEDIGKIVAQRAPRTLIHRLKRHKEAWISSSLGNSSEDKVFLHLAISSISHQAGQFRVII
QWQNENPPGPIQGALESAFPQGDSDVKALIKILSSLSWIRRTEEQCDVPQAKMFLSVLQM
ITLLLNSYDGQPFYTSANYMQEARSLRCLSDSFMVQSRDSGSARKHLQSSTVTFAKAAGK
AQHSLLQAPSQLVRATGPNLASLQRGSLPMGLRISCFFIKGLCKFHVPGYRFPLLPALKP
AVMPSSDRVRARIATKGQHAKADGVKEWKNLDL

>gi568815596r:223497432_223699282|GENSCAN_predicted_CDS_7|1362_bp
atgacatcactgaatgctgacttgggaagacgtggacacaattggctcctaagagcccat
gcaagtggctgtggctgctttgtgtctgggaatctctccgacattactgctccagatccc
aggctgcttcattcttgtgacatctccaccaagcacaagactcaaaggttcaccacaaca
ggagaagagagtgttagagagctgcgaggtgtcaggtggtcaattaagacaatgcaccaa
actgaaaagactgcaatgcaccggccatgcactatgcctggtgtgaggaggacagcctca
cctaccttcaataaggcctaccagaaccctgaattaagtgggtggtcatatcagaccatg
cagcagccctatggaacagaattagagtttcagtttgtcacaggatactatttcttcccc
agggtccagcccgctcctgtcatcaagcttgggctatttccttccctctccaacttagac
cacaggatccaccccgcaagcaagatccagccaatatcctcaagtagaattgacacattc
gatgaggacattggaaagatagtggcacaaagagcaccgaggacgttgatacatcggctc
aaaaggcataaagaggcttggatctcttcctcactgggaaacagcagcgaagacaaagtc
tttcttcaccttgcaatttccagcatctcccaccaggctgggcaattcagggtaattatt
caatggcagaatgagaatcccccaggcccaattcagggagccttggaatctgcatttcca
caaggtgattctgatgtaaaagcactgatcaagattttatcttctttatcctggattagg
agaactgaagaacaatgcgatgtaccacaggcaaaaatgtttctttcagtccttcaaatg
attactctccttttaaactcttatgatggccaacccttctatacatctgcaaactatatg
caggaagctaggagtctgagatgtttgagtgattcatttatggtacagtcaagggacagt
gggtctgctagaaaacacctgcaaagcagcacagtgacatttgctaaagctgctggaaaa
gctcaacactccctcttgcaggctccctcacagctggtaagggcaacaggacccaattta
gccagtcttcaaaggggtagtctgccaatgggattgagaatatcttgtttcttcataaaa
ggactttgcaagttccatgttcctggctaccgttttcctcttcttcctgccttgaaaccg
gctgtgatgccttcttctgaccgtgtaagggcaaggatagccacaaaaggccaacacgct
aaggctgatggagtaaaagagtggaaaaacctggatctttga