GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:44:04

Sequence gi568815594r:184595291_184834062 : 238772 bp : 43.18% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  12189  12228   40                              -2.56
 1.01 Init +  12316  12343   28  0  1   78   96    18 0.390   1.36
 1.02 Term +  29285  29484  200  0  2  116   36   167 0.513  11.86
 1.03 PlyA +  30043  30048    6                               1.05

 2.04 PlyA -  30500  30495    6                               1.05
 2.03 Term -  34211  33982  230  0  2   86   43   123 0.938   4.39
 2.02 Intr -  35851  35747  105  2  0   44   85    99 0.719   5.39
 2.01 Init -  37104  36978  127  0  1   40   95    84 0.715   4.62
 2.00 Prom -  55131  55092   40                              -2.26

 3.00 Prom +  61507  61546   40                              -3.46
 3.01 Init +  65423  65442   20  1  2   59   61    21 0.075  -3.94
 3.02 Intr +  66484  66613  130  1  1   36   84    84 0.770   3.50
 3.03 Intr +  70627  70774  148  0  1   65  111    46 0.784   4.41
 3.04 Intr +  76988  77170  183  0  0   63  123     8 0.248   1.56
 3.05 Intr +  84630  84654   25  1  1   67   53    52 0.470  -3.32
 3.06 Intr +  86958  87046   89  0  2  106   99    45 0.884   7.01
 3.07 Intr +  90119  90208   90  0  0   87   88    28 0.777   2.67
 3.08 Intr +  90286  90394  109  2  1   41  101    63 0.641   2.24
 3.09 Intr +  96209  96291   83  2  2   34   93    43 0.494  -1.32
 3.10 Term +  99323  99489  167  0  2    6   36   181 0.226   2.78
 3.11 PlyA + 100957 100962    6                               1.05

 4.11 PlyA - 103674 103669    6                               1.05
 4.10 Term - 103715 103697   19  1  1  116   54   -16 0.257  -4.41
 4.09 Intr - 105591 105530   62  0  2   50  103    87 0.512   3.93
 4.08 Intr - 107151 107073   79  2  1   81  103    65 0.913   6.85
 4.07 Intr - 114890 114782  109  0  1   55   89    85 0.825   4.64
 4.06 Intr - 117723 117654   70  0  1   96   80    15 0.917   0.25
 4.05 Intr - 121343 121107  237  2  0   74  103   184 0.959  16.31
 4.04 Intr - 122892 122749  144  0  0   62   31   166 0.889   8.78
 4.03 Intr - 123189 123131   59  1  2   81   84     2 0.874  -2.30
 4.02 Intr - 124763 124659  105  0  0   68   68    68 0.400   2.99
 4.01 Init - 125937 125925   13  0  1   81   84     2 0.577  -0.41
 4.00 Prom - 127227 127188   40                              -5.56

 5.00 Prom + 127674 127713   40                               0.14
 5.01 Init + 138771 139125  355  2  1  100  110   236 0.913  22.30
 5.02 Intr + 143006 143367  362  0  2   38   34   175 0.190   2.04
 5.03 Term + 150640 150765  126  0  0   76   48   128 0.480   5.88
 5.04 PlyA + 151145 151150    6                               1.05

 6.23 PlyA - 157059 157054    6                               1.05
 6.22 Term - 161975 161835  141  2  0  104   36   117 0.804   6.03
 6.21 Intr - 162416 162345   72  2  0   80   80    27 0.493   0.70
 6.20 Intr - 162630 162529  102  0  0   61  116    43 0.963   4.77
 6.19 Intr - 165210 165067  144  0  0   86   91   161 0.998  16.68
 6.18 Intr - 167233 167117  117  1  0  120  100    65 0.997  11.56
 6.17 Intr - 167965 167877   89  2  2   79  105   100 0.995  10.49
 6.16 Intr - 169635 169563   73  0  1   80   80    18 0.629  -0.82
 6.15 Intr - 170696 170601   96  2  0   62   94    52 0.688   3.41
 6.14 Intr - 171466 171332  135  1  0   43   92   188 0.989  15.46
 6.13 Intr - 173160 173026  135  0  0   73   91   181 0.999  17.66
 6.12 Intr - 177864 177791   74  1  2   92   78    48 0.839   3.33
 6.11 Intr - 178424 178373   52  2  1   83  109    -4 0.859  -0.32
 6.10 Intr - 181372 181194  179  2  2   94  105   190 0.996  20.94
 6.09 Intr - 181693 181594  100  1  1   58  102   113 0.994   9.38
 6.08 Intr - 185143 185042  102  1  0  137   64    84 0.988  11.27
 6.07 Intr - 188701 188637   65  2  2  116  109    19 0.960   5.24
 6.06 Intr - 193441 193327  115  1  1  113   82   106 0.987  12.52
 6.05 Intr - 195943 195849   95  2  2   88   65    28 0.766   0.18
 6.04 Intr - 202530 202364  167  2  2   23  110    68 0.321   2.10
 6.03 Intr - 203629 203271  359  1  2  -11   -8   279 0.101   2.45
 6.02 Intr - 208256 208030  227  0  2  103  101   297 0.567  30.20
 6.01 Init - 216425 216302  124  2  1   40   50    44 0.036  -3.87
 6.00 Prom - 219424 219385   40                              -4.56

 7.00 Prom + 228642 228681   40                              -1.46
 7.01 Init + 230774 230998  225  1  0   82   50   149 0.938   6.97
 7.02 Term + 231257 231466  210  1  0   81   42   123 0.830   4.29
 7.03 PlyA + 232680 232685    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_1|75_aa
MEYYAAIKKASITDLFLTTASITDLFLTTASITDLFLTTASIIDLFLTTASIIDLFLTTA
SITYLFLTTASIIQC

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_1|228_bp
atggaatactacgcagccataaaaaaggcctccatcactgacctgtttctgaccacagcc
tccatcactgacctgtttctgaccacagcctccatcactgacctgtttctgaccacagcc
tccatcattgacctgtttctgaccacagcctccatcattgacctgtttctgaccacagcc
tccatcacttacctgtttctgaccacagcctccatcattcagtgttag

>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_2|153_aa
MTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDELDCGIETDSGVDDDMAC
HKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVA
TEFESFSFDATFHAKKQIPCIVSMLTKELYFYH

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_2|462_bp
atgacatctcggtctggtacagatgtcgatgcagcaaacctcagggaaacattcagaaac
ttgaaatatgaagtcaggaataaaaatgatcttacacgtgaagaaattgtggaattgatg
cgtgatgaactggactgtggcattgagacagacagtggtgttgatgatgacatggcgtgt
cataaaataccagtggaggccgacttcttgtatgcatactccacagcacctggttattat
tcttggcgaaattcaaaggatggctcctggttcatccagtcgctttgtgccatgctgaaa
cagtatgccgacaagcttgaatttatgcacattcttacccgggttaaccgaaaggtggca
acagaatttgagtccttttcctttgacgctacttttcatgcaaagaaacagattccatgt
attgtttccatgctcacaaaagaactctatttttatcactaa

>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_3|347_aa
MELTATGKNLLHCYEVIPENAVCKLYFDLEFNKPANPGADGKKMVALLIEYVCKALQELY
GVNCSAEDVLNLDSSTDEKFSRHLIFQLHDVAFKDNIHVEAPARQGFSFNKMFTEKATEE
SWTSNSKKLERLGSAEQSSPDLSFLVVKNNMGEKHLFVDLGNRFLVPERFSDTLRILTCE
PSQNKQKGVGYFNSIGTSVETIEGFQCSPYPEVDHFVLSLVNKDGIKGGIRRWNYFFPEE
LLVYDICKYRWCENIGRAHKSNNIMILVDLKNEVWYQKCHDPVCKAENFKSDCASADAVW
DNGIDDAYFLEATEDAELAEAAENSLLSYNSEVDEIPDELIIEVLQE

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_3|1044_bp
atggaactgactgctacaggaaaaaatctcttacactgctatgaagttattcctgaaaat
gctgtgtgcaagctttattttgatttggaatttaacaaacctgccaacccaggagctgat
gggaaaaagatggttgcattactcattgagtatgtgtgtaaagcacttcaagagttatac
ggtgttaattgctcagctgaagatgttttgaacttggattctagcactgatgaaaaattc
agccggcatttaatatttcagctccatgatgtggcatttaaagataatattcatgttgaa
gcacctgcaagacaaggattttctttcaataaaatgttcacagaaaaggctacagaggaa
agctggacatcgaattcaaagaaactggagaggctggggtcagctgagcaaagcagtcct
gacctttcatttctagttgtgaagaataacatgggagagaagcatctttttgtagatctc
ggaaaccggttcctggtgccagaaaggttctcagatactttacgaattcttacatgtgag
ccatctcagaataaacaaaaaggagttggatattttaacagtatcggcacttcagtagaa
accattgaaggttttcagtgttctccctatcctgaagttgatcattttgttctttctttg
gtgaataaagatggcattaaaggaggaattcggcgttggaactactttttcccagaagaa
ttactggtttatgatatttgtaaatatcggtggtgtgaaaacattggaagagcccataag
agtaataatataatgattctggttgatctgaaaaatgaagtttggtatcaaaaatgtcat
gaccctgtatgtaaagcagaaaacttcaaatctgactgtgcatctgctgatgctgtctgg
gataatggcattgatgatgcttattttttagaagctactgaagatgctgaattagctgaa
gctgcagagaacagtcttctcagttataacagtgaagtggatgaaattcctgatgaacta
attatagaagtattacaagagtaa

>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_4|298_aa
MRLAGLVPGALFSSFDEVMFHWMVLMLMDVYQCLDIEESGLPFACMHGIEGPCASLDPGR
LPTAVASAQLLQWIQKALQWVQKVLQLEAGTDHRRSMQHAYVGALQPPGRKLRPISDDSE
SIEESDTRRKVKSAEKISTQRHEVIRTTASSELSEKPAESVTSKKTGPLSAQPSVEKENL
AIESQSKTQKKGKISHDKRKKSRSKAIGSDTSDIVHIWCPEGMKTSDIKELNIVLPEFEK
THLEHQQRIESKVCKAAIATFYVNVKEQFIKMMISDIEKKRQRMIEVQDELLRYKFRN

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_4|897_bp
atgaggctagcaggattggtccctggtgccttatttagttcatttgatgaggtcatgttt
cactggatggtcttgatgcttatggatgtttatcagtgtctagacattgaagagtcaggg
ctcccctttgcctgtatgcatggcatagagggcccctgtgccagtttggatcctgggaga
ctgcccacagctgtggcctctgcccagctgctgcagtggatccagaaggcgctgcagtgg
gtgcagaaggtgctgcagctggaggctggcactgaccataggagatccatgcagcatgcc
tatgtgggtgccctgcagcccccaggaagaaagctcaggcccattagtgatgactctgaa
agcattgaagaaagtgatacaaggagaaaagttaaatcagcagagaaaataagtacacaa
cgtcatgaggttattcgaaccacagcgtcttcagaactttcagagaaaccagctgagtct
gtcacttctaaaaagacaggaccccttagtgcccagccctctgttgaaaaagagaacttg
gcaatagaaagtcaatcgaaaactcagaaaaaagggaagatatctcatgacaaaaggaag
aaatcaagaagtaaagccataggctcagatacttctgacattgtgcacatttggtgtcca
gaaggaatgaaaaccagtgacatcaaggagttgaatattgttttgcctgaatttgagaaa
acccacctagagcatcaacaaagaatagaatctaaagtttgtaaggcagccatcgccaca
ttttatgttaatgttaaagaacaattcatcaaaatgatgatttcagatatcgaaaagaaa
aggcagcgtatgattgaagtccaggatgaactgcttcgatataaatttagaaattga

>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_5|280_aa
MVPLSALERLEAPAKPLAAPNSQSGPSTRACAGLPERPPGSSLAWSVRENWVWLLQRNGA
GVHAAQPVTYGPKHAKVFRAFAPTRIASFPAPESPGATWDGPLWGGERGGASVPESWAVV
PNPYTVLSQIPEEAEWFTVLELKDACFCIPLHSDSQFLFAFEDPTDHTSRLTWTVLPQGF
GDRPHLFGQALAQDLCHFSSPGTLVLQYVDDLLLATSSEASCQQATLELLKFLANQGYKH
WVHQGADEERAWRFDDVIGAQSASLSDVVNTASKSVQEDE

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_5|843_bp
atggtgccgctctccgctctcgagcgactggaagctcccgccaagcccctcgccgctccg
aacagccaatccgggccgagcacgcgcgcgtgcgcaggacttcctgagcggcccccgggc
tcctccctggcctggagcgtgagggaaaactgggtctggttattacagcgcaacggagct
ggagtccatgccgcacaaccagttacctacggtccaaaacatgccaaagttttccgggct
ttcgcgcccacccgcatcgccagttttccggcgccagaaagcccgggagccacgtgggac
ggccccttgtggggtggggaaaggggaggagctagtgtccctgagtcgtgggcagttgta
cccaacccctatactgtgctctctcaaataccagaggaagcagaatggttcacggttctg
gagctcaaggatgcctgcttctgtattcccctgcactctgactcccagtttctctttgcc
tttgaggatcccacagaccacacgtcccgacttacatggacagtcttgccccaagggttt
ggggatagacctcatctgtttggtcaggcactggcccaagatctatgccacttctcaagt
ccaggcactctggtccttcagtatgtggatgatttacttttggctaccagttcggaagcc
tcatgccagcaggctactctagagctcttgaaatttctagctaatcaagggtacaagcac
tgggtccaccagggggcagatgaagaaagggcctggagattcgacgatgtcattggagca
cagagcgcctcactttcagacgttgtaaatactgcttcaaagtcagttcaagaagatgaa
taa

>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_6|920_aa
MFRHPELKLCARSAITLIPPPPAQPPVTSLLLSVSVNLLILEFSLENYQHRTMQAHELFR
YFRMPELVDFRQYVRTLPTNTLMGFGAFAALTTFWYATRPKPLKPPCDLSMQSVEVAMRT
FVIAEGGSSAGKSCVQDLLLPVSTDPCDIHRSSECLRCSAGYLISVCSYTSSDHNQCYAG
TASLALLWIGGILKGCLLWKQFRWTERSHWNFGYWALGSPGNGNGCCVALFARGGHCTRA
EKAAALRELQASRKYRSDPLSLAEGESHLETRAVNASDLFSCHRTTAVGSFSARGTPLQS
AESGVAFEERALKKTMNAFLLCQEGSGGARRSALLDSDEPLVYFYDDVTTLYEGFQRGIQ
VSNNGPCLGSRKPDQPYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWV
IIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEKAKLLLEGVENKLIPGL
KIIVVMDAYGSELVERGQRCGVEVTSMKAMEPPAPEDLAVICFTSGTTGNPKGAMVTHRN
IVSDCSAFVKATECVMLCHGAKIGFFQGDIRLLMDDLKVLQPTVFPVVPRLLNRMFDRIF
GQANTTLKRWLLDFASKRKEAELRSGIIRNNSLWDRLIFHKVQSSLGGRVRLMVTGAAPV
SATVLTFLRAALGCQFYEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMN
YMAAEGEGEVCVKGPNVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKH
IFKLAQGEYIAPEKIENIYMRSEPVAQVFVHGESLQAFLIAIVVPDVETLCSWAQKRGFE
GSFEELCRNKDVKKAILEDMVRLGKDSGLKPFEQVKGITLHPELFSIDNGLLTPTMKAKR
PELRNYFRSQIDDLYSTIKV

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_6|2763_bp
atgtttcgtcatcccgaattgaaactctgtgcccgttcagcaataacgctcattcctcct
ccccctgcccagcccccagtaacctctctgctgctttctgtctctgtgaatttgctgatt
ctagaattcagcttagagaactatcaacacaggacaatgcaagcccatgagctgttccgg
tattttcgaatgccagagctggttgacttccgacagtacgtgcgtactcttccgaccaac
acgcttatgggcttcggagcttttgcagcactcaccaccttctggtacgccacgagaccc
aaacccctgaagccgccatgcgacctctccatgcagtcagtggaagtggcgatgagaacc
tttgtaattgctgaaggaggtagtagtgcaggcaagtcctgtgtgcaagacctgctgctc
ccagttagtacggacccctgtgacattcacagaagttcagaatgtctgagatgctctgca
ggctaccttatctccgtctgcagctacacctccagtgatcacaatcagtgctacgctggc
acagccagcctggccctgctctggattggaggcatcctcaagggctgcttgctgtggaag
cagtttcgctggaccgagaggagccactggaattttgggtactgggccttagggtcaccc
gggaatgggaatggctgctgtgtggccctgtttgccagagggggccattgtaccagggca
gagaaggctgctgccctcagggagctccaggccagcaggaagtaccgctcggaccccttg
tccttggcagagggtgagagccatcttgagactagagcagtcaatgcaagtgacttgttt
tcatgccatagaactacagctgtgggttcattctcagctaggggaactcctctgcagagt
gcagaaagtggtgttgcttttgaagagagagcactgaaaaagaccatgaatgcatttctg
ttgtgtcaagagggtagtggtggtgcacgaagatccgcactacttgacagcgacgagccc
ttggtgtatttctatgatgatgtcacaacattatacgaaggtttccagaggggaatacag
gtgtcaaataatggcccttgtttaggctctcggaaaccagaccaaccctatgaatggctt
tcatataaacaggttgcagaattgtcggagtgcataggctcagcactgatccagaagggc
ttcaagactgccccagatcagttcattggcatctttgctcaaaatagacctgagtgggtg
attattgaacaaggatgctttgcttattcgatggtgatcgttccactttatgataccctt
ggaaatgaagccatcacgtacatagtcaacaaagctgaactctctctggtttttgttgac
aagccagagaaggccaaactcttattagagggtgtagaaaataagttaataccaggcctt
aaaatcatagttgtcatggatgcctacggcagtgaactggtggaacgaggccagaggtgt
ggggtggaagtcaccagcatgaaggcgatggagcctccagcacctgaagatcttgcagta
atttgtttcacaagtggaactacaggcaaccccaaaggagcaatggtcactcaccgaaac
atagtgagcgattgttcagcttttgtgaaagcaacagagtgtgtaatgctgtgtcatgga
gctaaaatcggatttttccaaggagatatcaggctgctcatggatgacctcaaggtgctt
caacccactgtcttccccgtggttccaagactgctgaaccggatgtttgaccgaattttc
ggacaagcaaacaccacgctgaagcgatggctcttggactttgcctccaagaggaaagaa
gcagagcttcgcagcggcatcatcagaaacaacagcctgtgggaccggctgatcttccac
aaagtacagtcgagcctgggcggaagagtccggctgatggtgacaggagccgccccggtg
tctgccactgtgctgacgttcctcagagcagccctgggctgtcagttttatgaaggatac
ggacagacagagtgcactgccgggtgctgcctgaccatgcctggagactggaccgcaggc
catgttggggccccgatgccgtgcaatttgataaaacttgttgatgtggaagaaatgaat
tacatggctgccgagggcgagggcgaggtgtgtgtgaaagggccaaatgtatttcagggc
tacttgaaggacccagcgaaaacagcagaagctttggacaaagacggctggttacacaca
ggggacattggaaaatggttaccaaatggcaccttgaaaattatcgaccggaaaaagcac
atatttaagctggcacaaggagaatacatagcccctgaaaagattgaaaatatctacatg
cgaagtgagcctgttgctcaggtgtttgtccacggagaaagcctgcaggcatttctcatt
gcaattgtggtaccagatgttgagacattatgttcctgggcccaaaagagaggatttgaa
gggtcgtttgaggaactgtgcagaaataaggatgtcaaaaaagctatcctcgaagatatg
gtgagacttgggaaggattctggtctgaaaccatttgaacaggtcaaaggcatcacattg
caccctgaattattttctatcgacaatggccttctgactccaacaatgaaggcgaaaagg
ccagagctgcggaactatttcaggtcgcagatagatgacctctattccactatcaaggtt
tag

>gi568815594r:184595291_184834062|GENSCAN_predicted_peptide_7|144_aa
MLLVRSPRRPRPPAAPPRPQAPPPAGPAPPSARPPSCLGARGWRVAGGREAAAGERRWSR
PDCLGFHNESEEGQRSLTWAAPAARAGAGELRADCALHHGGHLLCGSEGFRGSEGFRVPA
MPILGLQKPTRWFSGSHPKGCSSF

>gi568815594r:184595291_184834062|GENSCAN_predicted_CDS_7|435_bp
atgctgctggtgcgctcgccgcgccggccccgccctcccgcggccccgccccgcccgcag
gccccgcccccggcaggccccgccccgccgagcgcccggccgccctcctgtctgggcgcg
cgtggctggcgggtggccggcggtcgagaggctgcggcgggcgaacgccgctggagtcgc
ccagactgcctcggatttcataatgaatctgaggaaggacaaaggagcctgacgtgggca
gcgcccgcagctcgcgccggtgcaggggagctgagggccgactgcgcgctgcaccacggc
ggccacctgctgtgcggttctgagggcttccgcggttctgagggcttccgcgtccctgcc
atgcccatcttggggcttcagaagccaacacgatggttttcgggctcacatcccaaaggc
tgctcttccttttag