GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:14:28

Sequence gi568815585r:41030490_41232511 : 202022 bp : 40.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  11158  11301  144  0  0   29   93    78 0.011   1.96
 1.02 Intr +  24554  24685  132  1  0   73  110    46 0.464   5.22
 1.03 Intr +  30418  30672  255  0  0   35   49   315 0.885  19.02
 1.04 Intr +  31024  31186  163  0  1   13   84   298 0.977  20.53
 1.05 Term +  31330  31526  197  2  2   50   46   144 0.590   2.99
 1.06 PlyA +  32018  32023    6                               1.05

 2.00 Prom +  33310  33349   40                              -6.85
 2.01 Init +  33817  33855   39  0  0   64   63     6 0.526  -4.06
 2.02 Intr +  34675  34798  124  0  1   77   98   148 0.906  13.94
 2.03 Intr +  38072  38248  177  0  0   98  107   108 0.997  12.67
 2.04 Intr +  41038  41084   47  2  2   22   86    55 0.429  -4.09
 2.05 Intr +  42293  42368   76  1  1   69  107    64 0.611   4.57
 2.06 Intr +  45555  45748  194  1  2   40  100   147 0.972   9.39
 2.07 Intr +  50157  50320  164  2  2   87   89   126 0.994  10.45
 2.08 Term +  52215  52425  211  0  1   41   33   182 0.835   3.78
 2.09 PlyA +  52560  52565    6                               1.05

 3.02 PlyA -  52588  52583    6                               1.05
 3.01 Sngl -  63085  62918  168  1  0   94   43   112 0.613   1.81
 3.00 Prom -  66803  66764   40                              -1.65

 4.05 PlyA -  66920  66915    6                               1.05
 4.04 Term -  77245  76556  690  1  0   93   43   174 0.215   6.00
 4.03 Intr - 102162 100019 2144  1  2   12   65  2000 0.013 176.47
 4.02 Intr - 103627 103542   86  0  2   42  105    79 0.009   3.54
 4.01 Init - 140552 140281  272  2  2   49   91   282 0.419  21.09
 4.00 Prom - 146580 146541   40                              -5.95

 5.02 PlyA - 146706 146701    6                               1.05
 5.01 Sngl - 163768 161714 2055  1  0   96   36  2151 0.999 203.67
 5.00 Prom - 168618 168579   40                              -5.35

 6.00 Prom + 168752 168791   40                              -5.75
 6.01 Init + 183059 183135   77  1  2    1  101   111 0.495   4.31
 6.02 Term + 183245 183653  409  2  1   46   45   216 0.738   6.80
 6.03 PlyA + 184642 184647    6                               1.05

 7.04 PlyA - 185119 185114    6                               1.05
 7.03 Term - 186739 186626  114  1  0   84   36   125 0.963   4.49
 7.02 Intr - 192865 192767   99  1  0   76   85    88 0.989   6.69
 7.01 Intr - 196079 195943  137  0  2  107  110    70 0.858  10.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  16472  15900  573  2  0   43   44   251 0.903  12.11
S.002 Sngl - 102022  99998 2025  1  0   96   44  1936 0.951 183.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_1|296_aa
PEQQSETLFPGGKKKGIQKTSKSQSIDQMHQNHLKMHTLLSPTPKDSTVPSPASSLMIQR
ETSQSPCSKVTLLTVVCEREEDMSPDTSSSLQLLLPPPPPPPPPPLLLPTRSRAREQAPS
ERVGVVGERRGGAAPLQQQSLRRSLATRSAGPAVSPLFFLTPPEDPDPQVPVAPLVKLGT
AERWSRGLSKVSGSEGGSGGHRAAGRARLVPLGKRESEWNPGRLAERLAQSYLQGRFSGR
GRNVTPLNALGYGARALGGGRRPVQGAGWTAAGEATQCSLYDAVGGRMHPLGFRSP

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_1|891_bp
cctgagcaacagagtgagaccctttttccagggggaaaaaaaaagggcatccagaagact
tcaaaaagccagtccatagatcagatgcaccagaatcatctaaagatgcacacactcctg
agtcctacacctaaagattcaactgtgccaagccctgcttcaagtctgatgatacagagg
gaaacaagtcaaagcccctgctccaaagttacactcctgacagtggtctgtgagcgggag
gaggatatgtccccagacacttccagctctctgcagctgctgctgccgccgccgccgccg
ccgccgccgccgccgctgctgctgcccacacgctcccgagctagggaacaagccccatcc
gagcgcgtgggcgtcgtaggggagaggaggggcggggccgctccgctgcaacagcaaagt
ttgaggcgaagcctagcgactcgcagcgccggtcccgcagtttcacctctttttttttta
actccgccagaggaccccgacccacaggtcccggttgctccgctggtcaaattgggaaca
gcggaacgctggtcccggggactgagtaaggtgtctggatcggagggaggttcgggtggg
catcgggcggctggaagagctcgactcgtcccgctgggaaagcgcgagtctgagtggaac
cctggacgacttgcagagcggctggcgcagtcatacctgcagggccggttctcagggcgg
ggtagaaatgttaccccgctgaacgccctggggtatggggcacgggctctagggggaggc
cggcggccggttcagggggctggttggacggccgcgggtgaagcgacgcagtgctctctc
tacgacgctgtcgggggtcgcatgcaccccttgggtttccgaagcccctga

>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_2|343_aa
MDTVLLLQTVLQSIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKRLGLESEILEPS
ITPVTSTIPPTSTSNQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKP
EGFQGDLKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSKVNENS
LGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQ
KQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGGGEP
KVVFKEKTVTSLGVMADGVAPVFKKRRTENGKSRNLRQRGDDQ

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_2|1032_bp
atggataccgtattgttattgcaaacagtgctgcagtcaattaaacagaaaagcctggat
aaggcaaaggaagaagaaaaggcatcaaaggagtttgctgcaatggaggcagctgccctg
aaagcataccaagaggatttgaaaagacttggcttagagtcagaaattttggagccaagc
ataacaccagtaaccagcactatcccacctacctcgacatcaaatcaacagaaagaaaag
aaagaaaagaagaaaagaaaaaaagatccttcaaagggcagatgggtagaaggcataacc
tctgagggttaccattactattatgatcttatctcaggagcatctcagtgggagaaacct
gaaggatttcaaggagacttaaaaaagacagcagtgaagaccgtttgggtagaaggttta
agtgaagatggttttacctattactataatacagaaacaggagaatccagatgggagaaa
cctgatgatttcattccacacactagtgatctgccttctagtaaggtcaatgaaaattca
cttggcaccctagatgaatccaaatcatcagattcgcatagtgattctgatggggaacag
gaagcagaagaaggaggggtctctacagagacagaaaagccaaaaataaagtttaaggaa
aaaaataaaaatagtgatggaggaagtgacccagaaacacagaaagaaaaaagtattcag
aaacagaattcattaggttcaaatgaagaaaaatcgaaaactcttaagaaatcaaaccca
tatggagaatggcaagaaattaaacaagaggttgagtctcatgaggaggtagatttggaa
cttccaagcactgaaaatgagtatgtatcaacttcagaagctgatggtggcggagaaccc
aaagtggtatttaaagaaaaaacagtcacttctcttggagttatggcagatggagtggcc
ccagtcttcaaaaagagaagaactgaaaatggaaaatctagaaatttaaggcaacgaggt
gatgatcaatag

>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_3|55_aa
MAGEASGNLQSLWKAKGKQAHLTWLEQEEEIEEEVLHTSKQADPMATHSLAQEQQ

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_3|168_bp
atggctggggaagcctcgggaaatttacaatcattgtggaaggcaaaagggaagcaggca
catcttacatggttagagcaggaggaagagatagaagaggaggtgctacatacttctaaa
caagcagatcctatggcaactcactcactagcacaagaacagcaataa

>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_4|1063_aa
MRSLGQNPTEAELQDMINEVDADGNGTVDFPEFLTMMARKMKDTDSEEEIRDAFCVFDKD
GNGYISATELHHVMTNLGENLTDDEVDEMIRGNGKKSGLIVLTTVDSDERGRQWQGFTGG
LNSVNGLVLLSLRRRCYLSVSEGRLRRSQSRVLQRFSPSAPVAISTMQSREDAPRSRRLA
SPRGGKRPKKIHKPTVSAFFTGPEELKDTAHSAALLAQLKSFYDARLLCDVTIEVVTPGS
GPGTGRLFPCNRNVLAAACPYFKSMFTGGMYESQQASVTMHDVDAESFEVLVDYCYTGRV
SLSEANVERLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFADAFGHRKLRSQAQS
YIAQNFKQLSHMGSIREETLADLTLAQLLAVLRLDSLDVESEQTVCHVAVQWLEAAPKER
GPSAAEVFKCVRWMHFTEEDQDYLEGLLTKPIVKKYCLDVIEGALQMRYGDLLYKSLVPV
PNSSSSSSSSNSLVSAAENPPQRLGMCAKEMVIFFGHPRDPFLCCDPYSGDLYKVPSPLT
CLAHTRTVTTLAVCISPDHDIYLAAQPRTDLWVYKPAQNSWQQLADRLLCREGMDVAYLN
GYIYILGGRDPITGVKLKEVECYNVKRNQWALVAPLPHSFLSFDLMVIRDYLYALNSKRM
FCYDPSHNMWLKCVSLKRNDFQEACVFNEEIYCICDIPVMKVYNPVRAEWRQMNNIPLVS
ETNNYRIIKHGQKLLLITSRTPQWKKNRVTVYEYDIRGDQWINIGTTLGLLQFDSNFFCL
SARVYPSCLEPGQSFLTEEEEIPSESSTEWDLGGFSEPDSESGSSSSLSDDDFWDSIFLL
LPFMVLGLGSNPAPRSEWVWGVERGQAVRADTPEPAGTGGGGWWGVGMCRVGLPLVPGSC
LFLEPEAQTCSCGCCSCSYTWKGRSYLFPALPRVQGGSDPLLHFGRLQPCPGGWGFCLLG
GVEQEAWICRCVFGSCSCTGSSHPNLEGAGLPLAPWSVQPQLHFPAAAGVMVAAPAITTV
HMRSLTRLDLGLPSVTCGISDYAPIHLPFHYLFYTRDTVDVLY

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_4|3192_bp
atgaggtctcttgggcagaatcccacagaagcagagttacaggacatgattaatgaagta
gatgctgatggtaatggcacagttgacttccctgaatttctaacaatgatggcaagaaaa
atgaaagacacagacagtgaagaagaaattagagatgcattctgtgtgtttgataaggat
ggcaatggctatattagtgcaacagaacttcaccatgtgatgacaaaccttggagagaat
ttaacagatgacgaggttgatgaaatgatcagagggaatgggaagaagagtggcttgatt
gttttgactacggtggacagtgatgagagaggaagacagtggcagggtttcacaggaggg
ttgaattcagtaaatgggctcgtgctgctgtctcttcggagacgctgctatcttagcgtc
agcgagggaaggttgaggaggagccagagccgggtcctgcagcgtttctcgccatcagcg
cccgtcgccatctccaccatgcagtcccgggaagacgccccgcgctctcgccgcctagcc
agtccccgtggtgggaagcggcccaagaagattcacaaacccacagtttcggcctttttc
acgggtccagaggaattaaaggacacggcccattctgcagccctgctggcacagctcaag
tccttctacgatgcgcggctgctgtgtgatgtgaccatcgaggtggtgacgcctggcagc
gggcctggcacgggtcgcctgttcccctgcaaccgcaatgtgctggccgcggcatgtccc
tacttcaagagcatgttcacaggtggcatgtacgagagccagcaggccagcgtgaccatg
cacgatgtggacgccgagtccttcgaggtgttggtcgactactgctacacgggtcgtgtg
tctctcagtgaggccaacgtggagcgcctgtacgcggcctccgacatgctacagctggaa
tatgtgcgggaagcctgtgcctccttcttagcccgacgtcttgacctgaccaactgcacc
gccatcctcaagtttgcagatgcctttggccatcgcaagctgcgatcccaggcccagtcc
tatatagctcagaacttcaagcaactcagccacatgggttcaattcgggaggagactcta
gcagatctgaccctggcccagctgctggctgtcctgcgcttggatagtctggacgtggag
agtgagcagacagtgtgccatgtggcagtgcagtggctggaggctgctcccaaagagcgg
ggtcccagtgctgcagaagtcttcaagtgcgtgcgctggatgcacttcactgaagaagat
caggactacttagaagggctgctgaccaagcccatcgtgaagaagtactgcctggacgtt
attgaaggggccctgcagatgcgctatggtgacctgttgtacaagtctctggtgccagtg
ccaaacagcagcagcagcagtagcagcagcaactctcttgtatctgcagcagaaaatcca
ccccagagactgggtatgtgtgccaaggagatggtgatcttctttggacaccccagagat
ccctttctctgctgtgatccatactcgggggacctttacaaagtgccgtcacctttgacc
tgtctggctcacactaggactgtcaccactttagctgtctgtatctctcctgaccatgac
atctatctagctgctcagcccaggacagacctctgggtgtataaaccagctcagaatagt
tggcagcaacttgcagatcgcttgctgtgtcgtgagggcatggatgtggcatatctcaat
ggctatatctacattttgggggggcgagaccctattactggagttaagttgaaggaagtg
gaatgctacaatgttaagagaaaccagtgggcattggtggctccactgccccattctttt
ttatcctttgacctaatggtaattcgagactatctctatgctctcaacagtaagcgcatg
ttctgttatgatcctagccacaatatgtggctgaagtgcgtttctctgaagcgcaatgac
tttcaggaagcctgcgtcttcaatgaggagatctattgtatctgtgatatcccagtcatg
aaggtctacaacccagttagggcagaatggaggcaaatgaataatattcccttggtctca
gagaccaacaactacagaattatcaagcatggccaaaaattgttgctcatcacctctcgc
accccacagtggaaaaagaaccgggtgactgtgtatgaatatgatattaggggagaccaa
tggattaatataggtaccacattaggcctcttgcagtttgattctaactttttttgcctc
tctgctcgtgtttatccttcctgccttgaacctggtcagagtttcctcactgaagaagaa
gaaataccaagtgagtctagcactgaatgggacttaggtggattcagtgagccagactct
gagtcaggaagttcaagttctctttctgatgatgatttttgggactctatcttcctcctg
ctgccattcatggtcctggggcttggttccaaccctgctccgagatcagagtgggtgtgg
ggagtggagagaggccaggcagtgagagcagacacccctgagcctgcagggacaggtggt
gggggttggtggggggtagggatgtgtcgggtggggctcccgcttgtccctggctcctgc
ctgttcctggagccggaggcccagacctgcagctgcgggtgctgcagctgcagctacacc
tggaagggcagatcctacttgttcccagctctcccaagagtacagggaggctcggatcca
ttgctgcattttgggcggctgcagccctgcccaggagggtggggcttctgcctgctcggt
ggagtagagcaggaggcctggatctgcaggtgcgttttcggcagctgcagctgcacaggg
agctcccatcccaacttagaaggggccgggctcccccttgctccatggagtgtgcaaccc
cagctgcacttccctgctgcagccggcgtgatggtagcagcccctgccatcaccaccgta
cacatgaggtcattgacccgtctggatttaggtttaccatctgttacttgcggaatttca
gactatgctccaatccacctaccttttcattatttgttttacacaagggatactgttgat
gtcctctactag

>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_5|684_aa
MQSREDVPRSRRLASPRGGRRPKRISKPSVSAFFTGPEELKDTAHSAALLAQLKSFYDAR
LLCDVTIEVVTPGSGPGTGRLFSCNRNVLAAACPYFKSMFTGGMYESQQASVTMHDVDAE
SFEVLVDYCYTGRVSLSEANVQRLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFA
DAFDHHKLRSQAQSYIAHNFKQLSRMGSIREETLADLTLAQLLAVLRLDSLDIESERTVC
HVAVQWLEAAAKERGPSAAEVFKCVRWMHFTEEDQDYLEGLLTKPIVKKYCLDVIEGALQ
MRYGDLLYKSLVPVPNSSSSSSSSNSLVSAAENPPQRLGMCAKEMVIFFGHPRDPFLCYD
PYSGDIYTMPSPLTSFAHTKTVTSSAVCVSPDHDIYLAAQPRKDLWVYKPAQNSWQQLAD
RLLCREGMDVAYLNGYIYILGGRDPITGVKLKEVECYSVQRNQWALVAPVPHSFYSFELI
VVQNYLYAVNSKRMLCYDPSHNMWLNCASLKRSDFQEACVFNDEIYCICDIPVMKVYNPA
RGEWRRISNIPLDSETHNYQIVNHDQKLLLITSTTPQWKKNRVTVYEYDTREDQWINIGT
MLGLLQFDSGFICLCARVYPSCLEPGQSFITEEDDARSESSTEWDLDGFSELDSESGSSS
SFSDDEVWVQVAPQRNAQDQQGSL

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_5|2055_bp
atgcagtcccgggaagacgtcccgcgctctcgccgcctcgccagtccccgtggtgggagg
cggcccaagaggatttccaagccctcggtttcggcctttttcacgggtccagaggagtta
aaggacacggcccattctgcagccctgctggcacagctcaagtccttctacgacgcgcgg
ctgctgtgtgatgtgaccatcgaggtggtgacgcctggcagcgggcctggcacgggtcgc
ctcttttcctgcaatcgcaacgtgctagcagctgcgtgtccctacttcaagagcatgttc
acaggtggcatgtacgagagccagcaggccagcgtgaccatgcacgatgtggacgccgag
tccttcgaggtgttggtcgactactgctacacgggtcgtgtgtctctcagtgaggccaat
gtgcagcgcctgtacgcggcctccgacatgctacagctggaatatgtgcgggaagcctgt
gcctccttcttagcccgacgtcttgacctgaccaactgcaccgccatcctcaagtttgca
gacgccttcgaccatcacaagcttcgatctcaggcccagtcctacatagctcacaacttc
aagcagctcagccgaatgggttcaattcgggaggagactctagcagatctaaccctggcc
cagctgctggctgtcctacgcctggatagtctggacatagagagtgagcggactgtatgc
catgtagctgtgcagtggctggaggctgctgccaaagagcggggtcccagtgctgcagaa
gtcttcaagtgcgtgcgctggatgcacttcactgaagaagatcaggactacttagaaggg
ctgctgaccaagcccatcgtgaagaagtactgcctggacgttattgaaggggccctgcag
atgcgctatggtgacctgttgtacaagtctctggtgccagtgccaaacagcagcagcagc
agtagcagcagcaactctcttgtatctgcagcagaaaatccaccccagagactgggtatg
tgtgccaaggagatggtgatcttctttggacatcctagagatccctttctctgctatgac
ccttactcgggggacatttacacaatgccatcccctttgaccagctttgctcacactaag
actgtcacctcctcagctgtctgtgtgtccccagaccatgacatctatctagctgctcag
cccaggaaagacctctgggtgtataaaccagctcagaatagttggcagcaacttgcagat
cgcttgctgtgtcgtgagggcatggatgtggcatatctcaatggctacatctacattttg
gggggacgagaccctattactggagttaagttgaaggaagtggaatgctacagtgttcag
agaaaccagtgggcattggtggctcctgtccctcattccttctattcctttgaactcata
gtggttcagaactatctttatgctgtcaacagtaagcgcatgctttgctatgatcctagc
cacaatatgtggctgaactgtgcttctcttaaacgtagtgactttcaggaagcatgtgtc
ttcaatgatgaaatctattgtatctgtgacatcccagtcatgaaggtctacaacccagct
aggggagaatggaggcggattagtaatattcctttggattcagagacccacaactaccag
attgtcaatcatgaccaaaagttgcttctcatcacttctacaaccccacaatggaaaaag
aaccgagtgacagtgtatgagtatgatactagggaagatcagtggattaatataggtacc
atgttaggccttttgcagtttgactctggctttatttgcctttgtgctcgtgtttatcct
tcctgccttgaacctggtcagagttttattactgaggaagatgatgcacggagtgagtct
agtactgaatgggacttagatggattcagtgagctggactctgagtcaggaagttcaagt
tctttttcagatgatgaagtctgggtgcaagtagcacctcagcgaaatgcacaggatcag
cagggttctttgtaa

>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_6|161_aa
MFAQAVRLYNKQVVKPAKLVSVSSGWLAPKPQDKILHTLPSPFHKQRGLSLWPLPPLTHG
EFCQTTTSVHLRPKGSSVSCDKCCQAWNSPLRVVKSPLAQCRSRNAIQEPGPGDPKSPLV
LYTMAKLIPEAGMSESHSRSTAYCLCIAVGYSGPMGSLVSR

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_6|486_bp
atgtttgcacaggccgtaaggctctacaataagcaggtggtgaagccagccaagcttgtg
tccgtctcttcaggatggctggcacccaaaccacaagacaaaatccttcacactcttccc
tcccctttccacaagcagaggggcctctccctatggcctctgccaccactgacccatggc
gaattctgtcagaccaccactagtgttcacttaaggcccaagggctcttcagtcagctgt
gacaaatgttgccaggcctggaactcacccctcagggtagtgaaatcccctctggcacag
tgcaggtccagaaatgctatccaagagcctggacctggggaccccaagagcccgttggtg
ctctacaccatggccaagctgatacctgaggctggcatgtccgagtctcactcaaggtcc
acagcatactgcctgtgcatcgctgttggttactcagggcccatgggctctttagtcagc
aggtga

>gi568815585r:41030490_41232511|GENSCAN_predicted_peptide_7|116_aa
XLVVECQQERSQIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYN
FTQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAELLDEHLKSAK

>gi568815585r:41030490_41232511|GENSCAN_predicted_CDS_7|351_bp
nggctagtagtagaatgccaacaagaaagatcacagataaaaaataaagaaatagccttt
cgtgtgttgagagctagactctaccagcagattattgagaaagacaagcgtcagcaacaa
agtgctagaaaactgcaggtgggaacaagagcccagtcagagcgaattcggacatataat
ttcacccaggatagagtcagtgaccacaggatagcatatgaagttcgtgatattaaggaa
tttttatgtggtgggaagggcctggatcagctaattcagagactgcttcaatcagcagat
gaagaagccattgctgaacttttggatgaacaccttaaatcagcaaaataa