GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:13:49

Sequence gi568815594r:81332297_81559508 : 227212 bp : 39.38% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     68     63    6                               1.05
 1.03 Term -  13534  13179  356  2  2  130   44   242 0.044  17.67
 1.02 Intr -  26960  26836  125  1  2   90   59    94 0.044   6.01
 1.01 Init -  42120  41969  152  0  2   90   38   118 0.056   6.56
 1.00 Prom -  51703  51664   40                              -6.85

 2.00 Prom +  55832  55871   40                              -3.65
 2.01 Init +  60189  60223   35  2  2   50   94    37 0.113  -0.10
 2.02 Intr +  60555  60748  194  0  2   82   53    95 0.093   3.61
 2.03 Intr +  85526  85718  193  0  1   84   12   156 0.478   5.23
 2.04 Intr +  91924  92024  101  1  2   64   72    92 0.409   4.03
 2.05 Term +  93426  93607  182  1  2  107   38   101 0.346   3.79
 2.06 PlyA +  93957  93962    6                               1.05

 3.06 PlyA -  94462  94457    6                               1.05
 3.05 Term -  95428  95238  191  2  2  107   54    57 0.323   0.83
 3.04 Intr -  97597  97280  318  2  0   73   40   199 0.147   8.61
 3.03 Intr - 101667 101544  124  0  1   86   91   108 0.918  10.14
 3.02 Intr - 102438 102343   96  0  0   90  105    11 0.825   2.29
 3.01 Init - 106580 106509   72  2  0   46   99    39 0.417   1.92
 3.00 Prom - 111590 111551   40                              -4.45

 4.10 PlyA - 112164 112159    6                               1.05
 4.09 Term - 113332 113180  153  1  0   74   38   157 0.986   6.24
 4.08 Intr - 113542 113447   96  1  0   88   77    66 0.964   4.79
 4.07 Intr - 115282 115208   75  1  0  110   84   103 0.999  10.89
 4.06 Intr - 115985 115773  213  2  0   67   95   241 0.641  20.69
 4.05 Intr - 124492 124304  189  1  0   96   35   186 0.839  12.96
 4.04 Intr - 125325 125203  123  0  0  107   90    57 0.964   7.66
 4.03 Intr - 127218 127036  183  0  0  125   45   149 0.858  13.36
 4.02 Intr - 140994 140821  174  0  0   76   58    92 0.613   4.21
 4.01 Init - 141714 141598  117  0  0   77   27    92 0.295   2.26
 4.00 Prom - 155301 155262   40                              -3.65

 5.00 Prom + 155672 155711   40                              -7.05
 5.01 Init + 155727 155851  125  2  2   82   91   101 0.830   9.49
 5.02 Intr + 167587 167639   53  1  2   94  101   -11 0.119  -1.57
 5.03 Intr + 169016 169132  117  0  0   57   86    88 0.530   5.02
 5.04 Intr + 173425 173540  116  2  2   49   89    38 0.172  -0.75
 5.05 Intr + 180817 180868   52  0  1  110   84    47 0.212   4.06
 5.06 Term + 186973 187049   77  2  2  103   54    67 0.626   1.82
 5.07 PlyA + 187471 187476    6                               1.05

 6.00 Prom + 189899 189938   40                              -5.15
 6.01 Init + 195120 195358  239  2  2   55   89   105 0.709   4.89
 6.02 Intr + 195398 195486   89  2  2   81   67    33 0.329  -0.80
 6.03 Term + 195892 196187  296  2  2   89   54    99 0.284   1.08
 6.04 PlyA + 196479 196484    6                               1.05

 7.00 Prom + 202302 202341   40                              -6.15
 7.01 Sngl + 202395 204503 2109  2  0   50   39   684 0.622  53.68
 7.02 PlyA + 204764 204769    6                               1.05

 8.04 PlyA - 205561 205556    6                               1.05
 8.03 Term - 211905 211797  109  2  1   34   43   141 0.257   1.20
 8.02 Intr - 219383 219152  232  0  1   69   71   122 0.158   4.51
 8.01 Init - 223417 223396   22  1  1   84   92    17 0.299   1.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_1|210_aa
MTSPNELNKAQGINTGETEICELSGREFETPALRKLKEIQDNREGIQNSIKCSTGTMAQI
QQSSMGAYVVHCQALPPCLIFLILFNSTQIATDTAVALLTGGECVDMRRKHFLCFSCQLH
PPLKLTLCHLDAKGLDPATPPFAERQCLGNRGQKNYGAACTGLREGAKPLQLILAVAIRG
AYPCPAVTLWSGIKGHSLYELKFISPLTGA

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_1|633_bp
atgacctcaccaaatgaactaaataaggcacaagggatcaatactggagaaacagagata
tgtgagctttcaggcagagaattcgaaacacctgctttgaggaaactcaaggaaattcaa
gataacagagaaggaattcagaattctatcaagtgcagtactggtaccatggctcaaatc
cagcagtcttccatgggagcctatgttgttcactgtcaagccttgccaccttgccttatc
ttcctgattctcttcaactcaactcagatagccacagacacagcagtagctcttctcact
gggggtgagtgtgtggacatgcggagaaagcattttttgtgcttttcatgccagctccac
cccccactgaaattgaccctatgccacttggatgccaaaggactggacccagctactcct
ccctttgcagagcggcaatgtcttggcaacagaggacagaaaaattatggagctgcctgc
actggactgcgggaaggggcaaagcctcttcaactcattttggcggtagccatcagaggg
gcatatccgtgtcctgcagtcacactgtggtcaggaatcaaaggtcacagtctttatgaa
ttgaagttcataagtcctctgacaggagcatga

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_2|234_aa
MAKTAITFAPTYWNNFPHLPTFPKSTHPSKPVSGPLYPKSLCKPSPSHRRGTEETSRTTS
SGLEVSGSFTHWLWLGADRKDIQTLISERSYPIPERKKPCTERREEPKQTGFAGFPASLL
DPSLSSNHISTPLSLLHRTEAWHVDSSWKEKVQKEVKSMLEKTVNEEMTEVPKPETSVKA
YAFFLLLLLPPTDTGASPVALHGMACALSLGKLNNIKLSVALASVCHHSATPIN

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_2|705_bp
atggcaaaaacagcaattacgtttgcaccaacctactggaataactttccccaccttcct
acttttccaaaatccacccatccatcaaaacctgtgtcaggtcctctttatccaaagagc
ctgtgcaaaccttctccatctcaccgcagagggacagaggagacatccaggactacaagc
tctggactagaggtcagcggttcttttactcactggctgtggcttggagctgaccgtaaa
gacattcagaccctcatttcagagaggtcctaccccatacctgagaggaagaaaccttgc
acagagaggcgagaagaacctaaacagacaggctttgctggcttcccggccagtctatta
gatccttccctttcatccaatcacatttctacaccactctccctgcttcatcgaactgaa
gcgtggcatgtggacagcagttggaaagagaaagtacagaaagaagttaaaagtatgcta
gaaaaaacagtaaatgaagaaatgacagaggtgccaaagccagaaacctcagtcaaagcc
tatgctttcttcttgctcctgcttctgcccccgaccgacaccggtgcttcccctgtggcc
ctgcatggcatggcatgtgccctttctctggggaaattgaataatataaagctttcagtg
gcactggcctctgtgtgtcatcactcagctacccccataaattaa

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_3|266_aa
MKLEAIILSKLTQEQKTKHCMFSLIVIPFFSLLIKDIYFLNEGCANRLPNGHVNFEKFWE
LAKQVSEFMTWKQVECPFERDRKILQYLLTVPVFSEDVSGLPVCWRMSVCPSASVLPSVS
SRRPAAPQTAPAKLRLIPPVCPACWHLSVCPAGVPFYQCAPLNVLSTTRHLRLLQQMCSS
PRPATCVSVCRRSRVFIGPRWGRDHGGAGLCFLASRTTNTHEDPAVIGAPGSAKHTSSLK
TRWRTYFLQLTDRLRFCETEMFTEDT

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_3|801_bp
atgaagctagaagccatcatcctcagcaaactaacacaggaacagaaaaccaaacactgc
atgttctcactcattgtgataccattcttcagtctcttaatcaaagatatttatttcctc
aatgagggttgtgccaaccgccttcccaatggccatgtcaattttgagaaattttgggaa
ctggccaaacaagtgagtgaatttatgacatggaaacaagtggagtgtccatttgagagg
gaccggaagatcttgcagtatctgctcacagtaccagtcttcagtgaagatgtaagtggc
ctgccagtgtgctggcgtatgtcggtgtgcccatctgccagcgtgctcccctcagtgtcc
tctcgacgaccagccgctcctcagactgcccctgccaaactccgcctcatcccgccagtc
tgtcctgcgtgctggcatctttcggtgtgccctgccggcgtgcccttctaccagtgtgct
cccctcaatgtcctctcgacgactcgccacttgcgtcttcttcagcagatgtgttcctca
ccacgtccagctacttgtgtgtctgtctgccggcggtctcgggtttttataggcccaaga
tgggggcgtgatcatggaggggctggcctttgttttctggcatctcgtaccacgaacact
catgaagaccctgcagtcattggagcacccgggtcagcaaagcacacaagctcactcaag
accagatggagaacttatttcctgcagctgacagatagactcagattttgtgagactgaa
atgttcactgaagacacttga

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_4|440_aa
MVDAPPPTKLECPGLISDCCCAGSENFKPVDLSLLGSIGNRDAKTELEKSTNQYNHNSRA
GPPSLCVSLCMAGPPSSLGLMASHLNCREAMVKSKAQESMPQTPPFSAMFDSSGYNRNLY
QSAEDSCGGLYYHDNNLLSGSLEALIQHLVPNVDYYPDRTYIFTFLLSSRLFMHPYELMA
KVCHLCVEHQRLSDPDSDKNQMRKIAPKILQLLTEWTETFPYDFRDERMMRNLKDLAHRI
ASGEEVGNLNLARLLEFPGRAWTYRKNVQQMMQCLIRKLAALSQYEEVLAKISSTSTDRL
TVLKTKPQSIQRDIITVCNDPYTLAQQLTHIELERLNYIGPEEFVQAFVQKDPLDNDKSC
YSERKKTRNLEAYVEWFNRLSYLVATEICMPVKKKHRARMIEYFIDVARECFNIGNFNSL
MAIICEYFVEDTCRLSLRIL

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_4|1323_bp
atggtggatgcccctcctcccaccaagctcgagtgtcctgggttgatctcagactgctgc
tgtgctggcagtgagaatttcaagccagtggatcttagtttgctgggctccattgggaat
cgggatgcaaaaactgagcttgaaaaatcaaccaaccagtacaaccacaacagcagggca
gggccacccagcctctgtgtttcactctgcatggctggcccaccaagttcccttggcctt
atggcttctcatttaaactgcagagaagctatggttaagtcaaaggctcaagaaagtatg
cctcagactcctcccttttcagcaatgtttgacagcagtggttacaatcgaaacctctat
cagtctgcagaggacagctgtggagggttgtattaccatgacaacaacctcctctctgga
tccctggaagcactcatccagcacttagtacctaatgtggattactatccagatagaaca
tacatatttaccttcctactcagttctcggttatttatgcatccgtatgagctaatggcc
aaagtttgccacttatgtgttgagcaccagagactaagtgatcctgatagtgataagaac
cagatgagaaaaattgcacccaaaatccttcaactcctcacggaatggacggaaacattt
ccctatgattttcgggatgaaagaatgatgagaaacttaaaagatctggctcaccgaata
gccagtggcgaagaggttggtaacctgaatttagcgcggctgctggaattcccaggcaga
gcctggacatacagaaagaatgtccagcaaatgatgcagtgtctgatccgcaagcttgct
gcgctcagccagtacgaagaagtcctggcaaaaatcagctccacatccacagatcggctc
acagttctcaagaccaagccacagtctatacaaagggatatcattactgtctgcaacgac
ccttacacgttggcccagcagctgactcatatagagctggagaggctcaattatattggg
ccagaagaatttgttcaggcgttcgtgcagaaggaccctttggataatgacaagagttgc
tacagtgaacggaagaaaacacgaaacttagaagcttacgtggaatggtttaatcgcctc
agctacttggttgctacagaaatctgtatgcctgttaagaaaaaacaccgagcaagaatg
attgagtatttcattgacgtagctcgggagtgttttaacattggcaacttcaactccttg
atggcgataatctgtgagtattttgtggaggatacatgtcgtttatctttacgaatcctg
taa

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_5|179_aa
MGKVFMTKTPKAMATKAKIDEWDLIKLKSFCTAKEIIIRMNSMTSSQTLPDRLLQSPCEY
CLHFLVDWFEPGVIISALQMKKRKKLKKDKKLSPNRTGRVMKKSLANQVFSSIKVPKPTK
QPNKKPGTIREESKAAMPPNDVCQLEELHVYDLALPPNDQLYLESGEPGSRAEKTGGCI

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_5|540_bp
atgggcaaagtcttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgat
gaatgggatctaattaaactaaagagcttctgcacagcaaaagaaattatcatcagaatg
aacagcatgacatcctctcaaacgctacctgacagactgctgcaatcaccctgtgaatat
tgtcttcatttccttgttgattggtttgaacctggggtcattatctctgctttgcaaatg
aagaagagaaagaagctcaaaaaggacaagaaactttccccaaatcgaacaggtagggtt
atgaaaaaatctttggctaaccaagtattctctagcataaaagtaccaaaaccaaccaag
caaccaaacaaaaagccgggtacaatcagagaagaaagcaaggctgccatgcctccgaat
gatgtctgtcagctagaggaattacatgtgtatgacttagcattgcctcccaatgaccaa
ctctacctagaatccggagagcctggaagcagggcagagaagactggaggatgcatctga

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_6|207_aa
MPAGVLAPCEAVAGPVIWQASSMAGTGECSVLQKLGGARKHRASKKVPQLWLRELLDLGS
LKGHSNSLLLSSLLSSPATCSFSPTILQFLSSCSVSRKNEEHRQLECGQVPIASRLFVCR
GACSSVQNHPLSFPPVLISTQCPEGTKAAGCWHVSAAPSVYAPNQIVTTPRLGHNFALKS
ELVPGAGRGQTAGAGTSEPTVEGGPGP

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_6|624_bp
atgccggcaggggtgttggctccctgtgaggctgtggctggaccagtcatatggcaagca
tcttccatggctggcactggggaatgcagtgtcctccagaagcttggaggtgccaggaaa
cacagagcctcaaagaaggtgccacagctctggctcagggagcttttagatctgggctct
ctgaagggccacagcaattctctccttctctcttctctcctctcatcacctgcaacatgc
tctttcagccccaccattctgcagttcctgagttcttgttctgtgtccaggaagaatgag
gaacacagacaactggagtgtgggcaagtgcccatagcatccaggctgtttgtgtgcaga
ggtgcctgcagttccgttcaaaaccatcccctcagctttcctcctgtactcatcagcacc
caatgtccggaggggaccaaggcagcagggtgctggcatgtcagtgctgccccaagtgtg
tatgcacccaaccagattgtgacaacacctaggcttggccacaactttgctctgaaatca
gagctggtgccaggagcagggagaggccagacagcaggagcaggcacttctgagcctaca
gtggaaggggggcctggcccttga

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_7|702_aa
MGDLNTPLSTLHRSTRQKVNKDTQELNSALHQADLTDIYRTLHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKYQRTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETSKNKDTTYQNLWDTFKAVCRGKFIALNTHKRKQERSKVDTLTSQLK
ELEKQEQTHSKASRRQEITKIREELKEIETQKTLQKINKSRSWFFERINKIDRPLARLIK
KKRQKNQIDTIKNDKGNITTNPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEVDFLNRPITGSEIVAIINSLPTKKSPGPEGFTAEFYQRYKEELVPFLLKLLQSIEKE
GILPNSFYEASITLIPKLGRDTTKKENFRPISLMNIDAKILNEILANQIQQHIKKLIHHD
QVGFIPGMQGWFNIRKSINVIQHVNRTKNKNHMIISIDAEKAFDKIQQAFMLKTLNTLGI
DGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVWEVLARAIRQE
KEIKGIQLGKEEVKLSLFADDMIVYLENPTVSAQNLLKLISNFNKVSGYKINVQKSQAFL
YTNNRQTESQIMSELPFTIASKRIKYLGIHLTRDEKDLFKENYKPLLKEIKEDTNKWKNI
PCSWVGRINVMKMAILPKVIYRFNAIPIKLPMPFFTDWKKLL

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_7|2109_bp
atgggagacttgaacaccccactgtcaacattacacagatcaacgagacagaaagttaac
aaggatacccaggaattgaactcagctctgcaccaagcggacctaacagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatatcaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccagcaagaacaaagacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcacta
aacacccacaagagaaagcaggaaagatccaaagttgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacactcaaaagctagcagaaggcaagaaataactaaa
atcagagaagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaataaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaag
aaaaaaagacagaagaatcagatagacacaataaaaaatgataaagggaatatcaccacc
aatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacaccctcccaagactaaac
caggaagaagttgactttctgaatagaccaataacaggctctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagaaggattcacagccgaattctaccag
aggtacaaggaggaactggtaccattccttctgaaactactccaatcaatagaaaaagag
ggaatcctccctaactcattttatgaggccagcatcaccttgataccaaagctgggcaga
gacacaaccaaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatc
ctcaatgaaatactagcaaaccaaatccagcagcacatcaaaaagcttatccaccatgat
caagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaatcaataaatgta
atccagcatgtaaacagaaccaaaaacaaaaaccacatgattatctcaatagatgcagaa
aaggcctttgacaaaattcaacaagccttcatgctaaaaactctcaatacattaggtatt
gatgggacatatctcaaaataataagagctatctatgacaaacccacagccaatatcata
ctgaatgggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccct
ctctcaccactcctattcaacatcgtgtgggaagttctggccagggcaatcaggcaggag
aaggaaataaagggtattcagttaggaaaagaggaagtcaaattgtccctgtttgcagat
gacatgattgtatatctagaaaaccccactgtctcagcccaaaatctccttaagctgata
agcaatttcaacaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattctta
tacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgct
tcaaagagaataaaatacctaggaatccaccttacaagggacgagaaggacctcttcaag
gagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacatt
ccatgctcatgggtaggaagaatcaatgtcatgaaaatggccatactgcccaaggtaatt
tatagattcaatgccatccccatcaagctaccaatgcctttcttcacagattggaaaaaa
ctactttaa

>gi568815594r:81332297_81559508|GENSCAN_predicted_peptide_8|120_aa
MKPSDLEVNQPSCICLLTKLYYDLCRVENDNLGLGQIHCLSVDVAGKVWLTLRTDPPVVF
VLSEEETPGEKMLMITIADIIDVYGDDADLIVVDKLFDMLLDLVCQYFTEDFRIDVHQGY

>gi568815594r:81332297_81559508|GENSCAN_predicted_CDS_8|363_bp
atgaagccaagtgatcttgaagttaaccagccctcatgtatatgcctgcttacaaaatta
tattatgacttatgcagagtggagaatgacaacctgggcctgggtcagattcactgctta
agtgtggacgtggctggcaaagtctggttaactctcaggacagacccaccagttgtcttt
gtgttgagtgaggaagagactcctggtgaaaaaatgctaatgataactattgctgacatt
atagacgtatatggggatgatgccgacttgatcgtggtggataagctttttgatatgcta
ctggatttggtttgccagtattttactgaggattttcgcatcgatgttcatcagggatat
tga