GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:06:04

Sequence gi568815582r:74523931_74761449 : 237519 bp : 45.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  28282  28488  207  0  0   39   48   272 0.460  15.64
 1.02 PlyA +  28842  28847    6                               1.05

 2.03 PlyA -  30262  30257    6                               1.05
 2.02 Term -  59904  59785  120  0  0   60   44    71 0.057  -1.63
 2.01 Init -  83164  82727  438  1  0   95   78   451 0.802  38.92
 2.00 Prom -  97719  97680   40                              -4.16

 3.12 PlyA -  99000  98995    6                               1.05
 3.11 Term - 100141  99998  144  1  0  129   42   152 0.986  12.61
 3.10 Intr - 102624 102413  212  1  2   93   93   138 0.979  13.43
 3.09 Intr - 104736 104522  215  2  2   72  119     3 0.571   0.16
 3.08 Intr - 107027 106851  177  1  0   62   91   100 0.980   6.73
 3.07 Intr - 108743 108593  151  0  1  104  109    95 0.998  12.42
 3.06 Intr - 112647 112416  232  0  1   67  103    53 0.532   2.05
 3.05 Intr - 114040 113926  115  0  1   98   98    39 0.877   6.35
 3.04 Intr - 120523 120432   92  1  2   65  100   113 0.999   8.99
 3.03 Intr - 120805 120611  195  1  0   72  110   130 0.854  13.21
 3.02 Intr - 128192 127973  220  1  1   86   36    95 0.236   2.40
 3.01 Init - 137519 137002  518  2  2   68   99   192 0.427  12.66
 3.00 Prom - 138352 138313   40                              -3.06

 4.00 Prom + 139634 139673   40                              -7.66
 4.01 Init + 141679 141733   55  0  1   59   59    70 0.307   0.65
 4.02 Term + 143574 143839  266  1  2   17   33   245 0.969   7.57
 4.03 PlyA + 144889 144894    6                               1.05

 5.12 PlyA - 144944 144939    6                               1.05
 5.11 Term - 149026 148995   32  2  2   79   48    38 0.397  -3.08
 5.10 Intr - 151170 151030  141  1  0   62   54   253 0.574  19.62
 5.09 Intr - 152740 152605  136  1  1   92   58   -16 0.278  -4.06
 5.08 Intr - 155050 154969   82  0  1   61  113    44 0.142   3.84
 5.07 Intr - 158856 158721  136  1  1   69  111    52 0.368   5.23
 5.06 Intr - 161653 161556   98  0  2   92  110    87 0.948  10.95
 5.05 Intr - 167538 167347  192  2  0  -22   85   145 0.308   1.81
 5.04 Intr - 171791 171352  440  2  2   27   36   439 0.097  24.91
 5.03 Intr - 172202 172122   81  2  0   75   42   108 0.203   4.73
 5.02 Intr - 176752 176523  230  2  2   53  105    73 0.230   3.09
 5.01 Init - 184609 184549   61  1  1   76   69    75 0.486   5.81
 5.00 Prom - 187170 187131   40                              -6.76

 6.10 PlyA - 187236 187231    6                               1.05
 6.09 Term - 190075 189945  131  2  2   58   49   128 0.932   4.24
 6.08 Intr - 192669 192417  253  0  1  104   94   430 0.743  42.21
 6.07 Intr - 195230 195058  173  0  2   96  105   316 0.991  33.76
 6.06 Intr - 202401 202295  107  2  2   94   95   146 0.861  15.76
 6.05 Intr - 203456 203314  143  2  2   97   93   175 0.977  18.05
 6.04 Intr - 205967 205781  187  1  1   81  -10   147 0.083   3.89
 6.03 Intr - 213367 213357   11  1  2  113   94     6 0.036  -3.24
 6.02 Intr - 216185 216093   93  2  0  120   77    83 0.087  10.56
 6.01 Init - 228174 228100   75  0  0   82    6   122 0.002   4.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  37163  37264  102  1  0   81   76    96 0.945   8.11
S.002 Init - 204744 204679   66  0  0   66   37    95 0.829   3.27
S.003 Intr + 225452 225571  120  0  0  103   89    92 0.976  11.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:74523931_74761449|GENSCAN_predicted_peptide_1|68_aa
VSPAPDLGPAATKMLMPKKNGIAIYELLFKEGVMVAKKDVHLPKYPDLAEDKNVPNLHIM
KAMQSLKS

>gi568815582r:74523931_74761449|GENSCAN_predicted_CDS_1|207_bp
gtctctccagccccggacctgggccctgcagccaccaagatgctgatgcctaagaagaac
gggattgccatctatgaactcctttttaaggagggagtcatggtggccaagaaggatgtc
caccttcctaagtacccagacctggcagaagacaagaatgtgcccaaccttcacatcatg
aaggccatgcagtctctcaagtcttaa

>gi568815582r:74523931_74761449|GENSCAN_predicted_peptide_2|185_aa
MAACGRVRRMFRLSAALHLLLLFAAGAEKLPGQGVHSQGQGPGANFVSFVGQAGGGGPAG
QQLPQLPQSSQLQQQQQQQQQQQQPQPPQPPFPAGGPPARRGGAGAGGGWKLAEEESCRE
DVTRVCPKHTWSNNLAVLECLQDVRETWSSGGRSHGESFEREMLGHWLIGVWICLPEKMM
IELKE

>gi568815582r:74523931_74761449|GENSCAN_predicted_CDS_2|558_bp
atggcggcgtgtggacgtgtacggaggatgttccgcttgtcggcggcgctgcatctgctg
ctgctattcgcggccggggccgagaaactccccggccagggcgtccacagccagggccag
ggtcccggggccaactttgtgtccttcgtagggcaggccggaggcggcggcccggcgggt
cagcagctgccccagctgcctcagtcatcgcagcttcagcagcaacagcagcagcagcaa
cagcaacagcagcctcagccgccgcagccgcctttcccggcgggtgggcctccggcccgg
cggggaggagcgggggctggtgggggctggaagctggcggaggaagagtcctgcagggag
gacgtgacccgcgtgtgccctaagcacacctggagcaacaacctggcggtgctcgagtgc
ctgcaggatgtgagggagacatggtcgagtggaggacgtagccatggtgagagctttgaa
agagagatgcttggacattggctaattggagtctggatatgtctccctgagaagatgatg
attgagctgaaggaatga

>gi568815582r:74523931_74761449|GENSCAN_predicted_peptide_3|756_aa
MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVVSSQGVPSILQPAPAEV
ISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQHRQGSDGNHTIPASSLHSM
TNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRRARAGGSQRTDSARLRAPLDA
YFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDSDSSAEYGGVVDQAEESGAVILE
GQYFTQPSPQKSEPLLPSASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCIST
WLKGQVRKCPQCNKKARHSDIVVLYARTLRALDTSEQERMKSSLLKEQMLRKQAELESAQ
CRLQLQVLTDKCTRLQRRVQDLQKLTSHQSQNLQQPRGSQAWVLSCSPSSQGQHKHKYHF
QKTFTVSQAGNCRIMAYCDALSCLVISQPSPQASFLPGFGVKMLSTANMKSSQYIPMHGK
QIRGLAFSSYLRGLLLSASLDNTIKLTSLETNTVVQTYNAGRPVWSCCWCLDEANYIYAG
LANGSILVYDVRNTSSHVQELVAQKARCPLVSLSYMPRAASAAFPYGGVLAGTLEDASFW
EQKMDFSHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNHTTIRSVLMEMSYRLDDTG
NPICSCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGDEAANSALLWDAASGSLLQ
DLQTDQPVLDICPFEVNRNSYLATLTEKMVHIYKWE

>gi568815582r:74523931_74761449|GENSCAN_predicted_CDS_3|2271_bp
atggctcatgaagcaatggaatatgatgttcaggtgcagttaaatcatgccgaacaacag
ccagctcctgctggcatggccagcagccaagggggaccagccctcctccagcctgttcct
gctgatgtggtcagcagccagggggtaccatccatcctccagccagctcctgctgaggtg
atcagcagccaagcgacaccacccctgctccagcctgctccgcaactgtctgttgacctg
acagaagtggaggtcttgggagaagacactgtggagaacatcaatccaagaacttcagaa
caacataggcagggatctgatggtaatcacaccatcccagcatcttcgttgcattcaatg
accaacttcatcagcggactgcagagacttcatggcatgctggaattcctgagaccttca
tcttcaaaccacagtgtagggccaatgagaacaagaaggagggtatctgcttcacggagg
gcaagagccggagggtctcagaggacagacagtgccaggttgagagcaccattggatgct
tactttcaggtgagcaggacccagcctgacttgccagctaccacttatgattcagagact
aggaatcctgtatctgaagagttgcaggtgtctagtagttctgattctgacagtgacagc
tctgcagagtatggaggggttgttgaccaggcagaggaatctggagctgtcattttagaa
ggtcagtattttacccagccatctccccagaagtctgagcctctgctaccttctgcttct
atggatgaggaagaaggggacacttgtacaatatgtctggaacagtggaccaatgctggg
gaccaccggctctcagcattacgctgtgggcatctctttgggtataggtgcatttccacg
tggcttaaaggacaagtacgaaaatgtccccagtgcaacaagaaagccaggcacagtgac
attgtcgtcctttatgcccgaaccctgagagctttggacactagtgaacaggagcgcatg
aaaagttccctactgaaggaacagatgctaaggaaacaggccgagttagaatcagcacag
tgccgactccaactgcaggtcctcactgataagtgcactaggcttcaaaggcgtgttcag
gacttgcaaaaacttacgtcacatcaaagtcagaatttacagcaacccaggggctcccaa
gcatgggtcctgagctgctcaccctccagccagggccagcacaagcacaagtaccacttc
caaaagaccttcacagtatctcaggcaggaaactgccggatcatggcatactgtgatgct
ctgagctgcctggtgatatcacagccttctcctcaggcctcttttcttccaggctttggt
gttaagatgttgagtactgccaacatgaagagcagtcagtacattccgatgcatggcaaa
cagatccgtggactggcgtttagcagttacctcagaggcttgctactctctgcttcccta
gacaacactattaaactgaccagcctggagacaaataccgtggtccagacttataatgct
ggacgtcctgtctggagctgttgctggtgtcttgatgaggctaactacatctatgctgga
ctggccaatggttcaattctggtatatgacgtgcgaaacacgagcagtcatgtgcaggag
ttagtagctcagaaagccagatgcccactggtctccctgtcatacatgcccagagctgcc
tcagctgcatttccatatggtggggtgctggctggaaccttggaggatgcttcattctgg
gaacagaaaatggacttttctcattggcctcatgtgctgcccttggagccagggggctgc
atagactttcagacagagaacagctcccggcactgtcttgtgacctacaggcctgataaa
aatcacaccaccatacgaagtgtgctgatggaaatgtcctaccgactggatgacactgga
aatccaatctgctcctgccagcctgtacatacattttttggaggacctacttgcaaacta
ttgaccaaaaatgccattttccaaagcccagagaatgatggcaacatcctggtgtgtact
ggggatgaagcagcaaattctgccctgctgtgggatgctgccagtggctcgttgctccag
gacctacagaccgatcagcctgtgttggacatctgcccatttgaggtgaaccgtaacagc
tacttggctaccttaacagagaagatggtccacatctataagtgggagtga

>gi568815582r:74523931_74761449|GENSCAN_predicted_peptide_4|106_aa
MSRAWWRAPVVPAIAGSRGPPLAASAKRKGPPEFSSYVRGARAHSRLGSEPAAGRKATKK
TDKPRQDDKDDLDVTELTNEDPLDQLVKYGVNCGPIVGTTRKLYEK

>gi568815582r:74523931_74761449|GENSCAN_predicted_CDS_4|321_bp
atgagccgggcgtggtggcgcgcacctgtggtcccagctattgcgggaagccgagggccg
ccgctcgccgccagcgccaaaagaaaggggcccccggaattctccagctacgtacgagga
gcgcgagcccacagccgtctcggctccgagcccgccgccggcaggaaagccacaaagaaa
actgataaacccagacaagatgataaagacgatctagatgtaacagaactcactaatgaa
gatcctttggatcagcttgtgaaatacggagtgaattgtggtcctattgtgggaacaacc
aggaagctgtatgagaaatag

>gi568815582r:74523931_74761449|GENSCAN_predicted_peptide_5|542_aa
MQAKQMLALAKVLGQKQEHRGRDRGALSPPATCGVRYSQQSAGCGHQERGRRGTPAGLAF
ANFSPGQEAVVGKKVEERAFWNCARDRLDAHPSGGAKGRFTPRIQPTKGECEEAAQLPQS
EVEQVIHKRCEEMKYCKKQCRRLGHRVLGLIKPLEMLQDQGKRSVPSEKLTTAMNRFKAA
LEEANGEIEKFSNRSNICRFLTASQDKILFKDVNRKLSDVWKELSLLLQVEQRMPVSPIS
QGASWAQEDQQDADEDRRAFQMLRRGKLGLWSDLPPKCMQEIPQEQIKEIKKEQLSGSPW
ILLRENEVSTLYKGEYHRAPVAIKVFKKLQAGSIAIVRQTFNKEIKTMKKFESPNILRIF
GICIDETVTPPQFSIVMEYCELGTLRELLDREKDLTLGKRMVLVLGAARGLYRLHHSEAP
ELHGKIRSSNFLVTQGYQVKMPFPLCDGDISTPKTLFLLLSRSSCSLTIRCAIPPFIPGI
PYGARCCNSEKIRKLVAVKRQQEPLGEDCPSELREIIDECRAHDPSVRPSVDEQKRRLND
VF

>gi568815582r:74523931_74761449|GENSCAN_predicted_CDS_5|1629_bp
atgcaagccaagcagatgctggctttggcaaaagtccttggacaaaagcaggaacataga
ggtagggatcggggcgccttgtcgccgccagccacgtgtggcgtccggtacagtcagcag
agtgcagggtgcgggcaccaggaaagggggcgcaggggaactcccgcgggcctcgcgttt
gcaaacttctcgcctgggcaggaggcggtcgtgggaaagaaggtggaagagcgagctttt
tggaactgtgcacgggacagattggacgcacacccctcgggaggcgcgaagggccgcttc
accccacgcatccagccaaccaagggagagtgtgaggaggcggcacagctgccccagtcc
gaagtagagcaggtcatccacaaacggtgtgaagagatgaaatactgcaagaaacagtgc
cggcgcctgggccaccgcgtcctcggcctgatcaagcctctggagatgctccaggaccaa
ggaaagaggagcgtgccctctgagaagttaaccacagccatgaaccgcttcaaggctgcc
ctggaggaggctaatggggagatagaaaagttcagcaatagatccaatatctgcaggttt
ctaacagcaagccaggacaaaatactcttcaaggacgtgaacaggaagctgagtgatgtc
tggaaggagctctcgctgttacttcaggttgagcaacgcatgcctgtttcacccataagc
caaggagcgtcctgggcacaggaagatcagcaggatgcagacgaagacaggcgagctttc
cagatgctaagaagaggcaagctgggtctttggtcagatttaccaccaaaatgcatgcag
gagatcccgcaagagcaaatcaaggagatcaagaaggagcagctttcaggatccccgtgg
attctgctaagggaaaatgaagtcagcacactttataaaggagaataccacagagctcca
gtggccataaaagtattcaaaaaactccaggctggcagcattgcaatagtgaggcagact
ttcaataaggagatcaaaaccatgaagaaattcgaatctcccaacatcctgcgtatattt
gggatttgcattgatgaaacagtgactccgcctcaattctccattgtcatggagtactgt
gaactcgggaccctgagggagctgttggatagggaaaaagacctcacacttggcaagcgc
atggtcctagtcctgggggcagcccgaggcctataccggctacaccattcagaagcacct
gaactccacggaaaaatcagaagctcaaacttcctggtaactcaaggctaccaagtgaag
atgcctttccccctctgcgatggtgatataagtactcccaaaacactgtttctactactc
tcacgctcttcatgcagcctgactataagatgcgctattccacctttcatccctggtatc
ccatacggcgctagatgctgtaattctgagaagatccgcaagctggtggctgtgaagcgg
cagcaggagccactgggtgaagactgcccttcagagctgcgggagatcattgatgagtgc
cgggcccatgatccctctgtgcggccctctgtggatgagcagaagcgcagacttaatgat
gtgttctga

>gi568815582r:74523931_74761449|GENSCAN_predicted_peptide_6|390_aa
MEPLELADALDVSSEGKEEVEDDTKGSMENEPVALEETQKTDPAMEPRFKVVDWDKNTAS
GCLTPRAEDWLSIHRDTLILTPIVCGRLGPTSITDEGTEGLREEKMHVQDLTAGQRHSQA
LMDLVDWRKPLLWQVGHLGEKYDEWVHQPVTRPIRLFHSDLIEGLSKTVWYSVPIIWVPL
VLYLSWSYYRTFAQGNVRLFTSFTTEYTVAVPKSMFPGLFMLGTFLWSLIEYLIHRFLFH
MKPPSDSYYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLVIGVFYLCMQLILPEAVGGT
VFAGGLLGYVLYDMTHYYLHFGSPHKGSYLYSLKAHHVKHHFAHQKSGGSHPLGGQVALG
DPLLPGASLPRAQPTGLLQAVATGSSRKGK

>gi568815582r:74523931_74761449|GENSCAN_predicted_CDS_6|1173_bp
atggaaccattagaacttgctgatgcattggatgtcagcagcgagggaaaggaagaagtt
gaggatgacaccaagggctccatggagaacgagcctgtagcccttgaggaaactcagaag
acagatcctgctatggaaccacggttcaaagtggtggattgggacaagaacacagccagt
ggctgcctgactccccgtgctgaagattggctgagcatccaccgagacaccctcatcctc
actccgattgtgtgtggcagattggggcccaccagcatcacagatgagggcactgagggg
ctccgggaggaaaagatgcacgtccaggatctcacagctggtcaaaggcacagccaggct
ctaatggacctggtggactggcgaaagcctctcctgtggcaggtgggccacttgggagag
aagtacgatgagtgggttcaccagccggtgaccaggcccatccgcctcttccactcagac
ctcattgagggcctctctaagactgtctggtacagtgtccccatcatctgggtgcccctg
gtgctgtatctcagctggtcctactaccgaacctttgcccagggcaacgtccgactcttc
acgtcatttacaacagagtacacggtggcagtgcccaagtccatgttccccgggctcttc
atgctggggacattcctctggagcctcatcgagtacctcatccaccgcttcctgttccac
atgaagccccccagcgacagctattacctcatcatgctgcacttcgtcatgcacggccag
caccacaaggcacccttcgacggctcccgcctggtcttcccccctgtgccagcctccctg
gtgatcggcgtcttctacttgtgcatgcagctcatcctgcccgaggcagtagggggcact
gtgtttgcggggggcctcctgggctacgtcctctatgacatgacccattactacctgcac
tttggctcgccgcacaagggctcctacctgtacagcctgaaggcccaccacgtcaagcac
cactttgcacatcagaagtcaggagggtcacatccacttggtggccaggtggcccttggt
gacccacttcttcctggagcgtccctgcctagagctcagcccacaggactgcttcaggcc
gtggccacaggtagcagccgcaaggggaaatga