GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:14:00

Sequence gi568815597r:32836809_33064685 : 227877 bp : 47.82% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  16271  16358   88  0  1  122  101    36 0.634   7.33
 1.02 Term +  22452  22557  106  0  1  100   40    51 0.209  -0.62
 1.03 PlyA +  26285  26290    6                               1.05

 2.07 PlyA -  26749  26744    6                               1.05
 2.06 Term -  27028  27002   27  1  0  118   47    40 0.793   0.97
 2.05 Intr -  27989  27856  134  0  2  145  100   204 0.999  27.66
 2.04 Intr -  31034  30945   90  0  0   68  109   115 0.944  11.57
 2.03 Intr -  31580  31415  166  2  1   48   49   263 0.966  17.93
 2.02 Intr -  32189  32074  116  0  2   85   95   127 0.984  13.27
 2.01 Init -  34082  33845  238  2  1  105   90   222 0.999  20.27
 2.00 Prom -  37329  37290   40                              -9.16

 3.00 Prom +  45442  45481   40                              -4.96
 3.01 Init +  52091  52468  378  1  0  105   80   880 0.754  85.80
 3.02 Intr +  56716  56821  106  0  1  130   89   168 0.999  20.89
 3.03 Term +  56957  57054   98  0  2  122   54   184 0.697  16.53
 3.04 PlyA +  57265  57270    6                              -5.99

 4.07 PlyA -  57808  57803    6                              -1.95
 4.06 Term -  58170  57997  174  0  0   -6   54   195 0.681   4.46
 4.05 Intr -  58631  58497  135  2  0  100  115   120 0.970  16.66
 4.04 Intr -  58935  58747  189  0  0   55   73   151 0.977  10.08
 4.03 Intr -  59161  59102   60  1  0   58   92    69 0.852   3.23
 4.02 Intr -  61511  61318  194  0  2   66   44   361 0.990  28.71
 4.01 Init -  64430  64415   16  2  1   83   97    34 0.630   3.54
 4.00 Prom -  77850  77811   40                              -2.96

 5.12 PlyA -  78740  78735    6                               1.05
 5.11 Term -  84523  84368  156  1  0   21   43   187 0.857   5.43
 5.10 Intr -  89458  89316  143  2  2   35  115    17 0.066  -0.83
 5.09 Intr - 100451 100090  362  1  2   70   50   339 0.376  23.16
 5.08 Intr - 101720 101589  132  1  0  103   91   112 0.999  12.76
 5.07 Intr - 105651 105444  208  1  1   58   97   124 0.967   8.44
 5.06 Intr - 107351 107211  141  0  0  146   98   133 0.999  20.42
 5.05 Intr - 108820 108706  115  1  1   91   99    84 0.999   9.82
 5.04 Intr - 109756 109594  163  0  1  119  116   142 0.998  20.08
 5.03 Intr - 111558 111414  145  1  1   48  110   -13 0.427  -3.76
 5.02 Intr - 112966 112761  206  0  2   68   75   156 0.738  11.14
 5.01 Init - 127877 127243  635  2  2   95   88   930 0.134  88.52
 5.00 Prom - 140049 140010   40                              -6.96

 6.00 Prom + 141721 141760   40                              -7.96
 6.01 Sngl + 143137 143664  528  0  0   78   43   670 0.779  57.56
 6.02 PlyA + 143694 143699    6                               1.05

 7.05 PlyA - 147060 147055    6                               1.05
 7.04 Term - 150588 150206  383  1  2   40   43   190 0.761   4.70
 7.03 Intr - 155515 155422   94  1  1  102   75   -11 0.484  -1.46
 7.02 Intr - 161021 160903  119  0  2   33   72    94 0.452   2.48
 7.01 Init - 161805 161703  103  0  1   66   80    76 0.793   5.00
 7.00 Prom - 164624 164585   40                              -3.56

 8.07 PlyA - 166452 166447    6                               1.05
 8.06 Term - 176594 176373  222  2  0  112   35   269 0.952  20.92
 8.05 Intr - 177786 177714   73  2  1  124   52   104 0.999   9.81
 8.04 Intr - 184653 184559   95  0  2   30   63   123 0.998   2.76
 8.03 Intr - 184895 184785  111  2  0   90   64   107 0.870   9.08
 8.02 Intr - 187759 187634  126  1  0   82   82    58 0.612   5.48
 8.01 Init - 200020 199928   93  1  0  105   99   105 0.893  13.68
 8.00 Prom - 203161 203122   40                              -3.46

 9.02 PlyA - 206452 206447    6                               1.05
 9.01 Term - 227808 227674  135  0  0   81   49   104 0.839   3.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 127877 127239  639  2  0   95   53   942 0.866  87.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_1|64_aa
XISGELCALMDQVHHMQHSKWQHPSDLTTRASIDCGRSHAIQEHSLFEGDVRNQNQWYRI
DGCS

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_1|195_bp
ngtatctcgggggagctttgtgccttgatggatcaagttcatcatatgcagcactcaaaa
tggcagcatccttcggacctcaccacgcgagctagcattgattgtggaagaagccatgct
atccaagagcattctctctttgaaggggatgtaagaaaccagaatcagtggtacagaatt
gatggttgttcataa

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_2|256_aa
MQAARGGAGRPERPGRPGRGPERERERPPGAGAASPCAAPGLPAGGATIHPGSPSAWPPR
ARAALRLWLGCVCFALVQADSPSAPVNVTVRHLKANSAVVSWDVLEDEVVIGFAISQQKK
DVRMLRFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEPVLFKTPHEVTMKE
MGRNQQLRTGEVLIIVVVLFMWAGVIALFCRQYDIIKDNEPNNNKEKTKSASETSTPEHQ
GGGLLRSKPCKKAIHN

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_2|771_bp
atgcaggcggctcggggcggcgcagggcggccggagcggccgggccggccgggccggggg
ccggagcgcgagcgcgagcggccgccgggcgccggagccgcgtccccctgcgccgccccg
ggcctgccggccggaggagccaccatacaccccgggtcgccgagcgcctggccgccccgc
gcccgcgccgcgctccgcctgtggctgggctgcgtctgcttcgcgctggtgcaggcggac
agtccctcagccccagtgaacgtcaccgtcaggcacctcaaggccaactctgcagtggtg
agctgggatgttctggaggatgaggttgtcatcggatttgccatctcccagcagaagaag
gatgtgcggatgctgcgcttcatccaggaggtgaacaccaccacccgctcatgtgccctc
tgggacctggaggaggatacggagtacatagtccacgtgcaggccatctccattcagggc
cagagcccagccagcgagcctgtgctcttcaagaccccgcatgaggtaaccatgaaagag
atggggaggaaccaacagctgcggacaggcgaggtgctgatcatcgtcgtggtcctgttc
atgtgggcaggtgtcattgccctcttctgccgccagtatgacatcatcaaggacaatgaa
cccaataacaacaaggaaaaaaccaagagtgcatcagaaaccagcacaccagagcaccag
ggcggggggcttctccgcagcaagccttgcaagaaggctattcacaattag

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_3|193_aa
MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGD
ASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREE
MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIV
RLLQCDPSSASQF

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_3|582_bp
atgggcaagcagaacagcaagctgcggcccgagatgttgcaggacctgcgagagaacaca
gagttctcagagctggagctgcaggagtggtacaagggcttcctcaaggactgccccaca
ggaatcctcaatgtggatgagttcaagaagatctacgccaacttctttccctatggtgac
gcctccaagtttgccgagcacgtcttccgcacctttgacaccaacagcgatggcaccata
gactttcgggagttcatcattgcgctgagcgtgacctcgcgcggccgcctggagcagaag
ctcatgtgggccttcagcatgtatgacctggacggcaacggctacatcagccgggaggag
atgctggagatcgtgcaggccatttacaagatggtttcgtccgtgatgaagatgccggag
gacgagtcgaccccggaaaagaggactgagaaaatcttccgccaaatggacacaaacaac
gacggcaagctgtccttggaggagttcatccgcggggccaaaagcgacccgtccatcgtg
cgtctgctgcagtgcgaccccagcagcgcctcccagttctga

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_4|255_aa
MCLRLGGLSVGDFRKVLMKTGLVLVVLGHVSFITAALFHGTVLRYVGTPQDAVALQYCVV
NILSVTSAIVVITSGIAAIVLSRYLPSTPLRWTVFSSSVACALLSLTCALGLLASIAMTF
ATQGKALLAACTFGSSELLALAPDCPFDPTRIYSSSLCLWGIALVLCVAENVFAVRCAQL
THQLLELRPWWGKSSHHMSLPALTSFHFPDVLEEETQAENQWVWQPPVSLQMRENPELVE
GRDLLSCTSSEPLTL

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_4|768_bp
atgtgtctgcgcctcggaggcctgagtgtgggcgacttccggaaggtgctgatgaagaca
ggcctggtgctggtggtgctgggccatgtgagcttcatcacagctgccctgttccatggc
acagtgctgcgctacgtgggcacccctcaagatgcggtggctctgcagtactgcgtggtc
aacatcctctctgtcacttccgccatcgtggtcatcacttcaggcatcgcagccatcgtg
ttgtcacgctacctccctagcacccccctgcgctggacagtgtttagctcgagcgtggcc
tgtgctctcctttctctgacctgtgccctcggcctcttggcctccatcgccatgaccttt
gccacccagggcaaggcactgctggctgcctgcacttttgggagctctgaactactggcc
ctcgcacctgactgtcccttcgaccccacacgcatttatagctccagcctgtgcctctgg
ggcatcgccctagtgctctgcgtggcggagaacgtgtttgctgtacgctgtgctcagctc
acccaccagctgctggagctgaggccctggtgggggaaaagcagccaccacatgagcctt
ccagccctcacctccttccatttcccggatgtcctggaggaggagacccaggctgagaac
cagtgggtctggcagcctcctgtgtctctgcagatgcgggagaacccagagctggtggag
ggccgtgacctgctgagctgcaccagctctgagcctctgaccctctga

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_5|801_aa
MGSEKDSESPRSTSLHAAAPDPKCRSGGRRRRLTLHSVFSASARGRRARAKPQAEPPPPA
AQPPPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECP
LCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVPISCPECSERLNPHDIRLLLA
DPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCQTEFCYH
CKQIWHPNQTCDMARQQRAQTLRVRTKHTSGLSYGQESGPADDIKPCPRCSAYIIKMNDG
SCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQLGTLIGAPVG
ISLIAGIAIPAMVIGIPVYVGRKIHSRYEGRKTSKHKRNLAITGGVTLSVIASPVIAAVS
VGIGVPIMLAYVYGVVPISLCRGGGCGVSTANGKGVKIEFDEDDGPITVADAWRALKNPS
IGESSIEGLTSVLSTSGSPTDGLSVMQGPYSETASFAALSGGTLSGGILSSGKGKYSRLE
VQADVQKEIFPKDTASLGAISDNASTRAMAGSIISSYNPQDRECNNMEIQVDIEAKPSHY
QLVSGSSTEDSLHVHAQMAENEEEGSGGGGSEEDPPCRHQSCEQKDCLASKPWDISLAQP
ESIRSDLESSDAQSDDVPDITSDECGSPRSHTAACPSTPRAQDGGLTGEAPPEDVPGPHK
TLSSGGERIDHRCVPTKNSTPKSSVSSPGKKARIESTFEIDQSNAFIRQRRKRRHKEEDI
KTTRPSAYSSLSRLLRPVDLS

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_5|2406_bp
atgggctccgagaaggactccgagtcgccgcgctccacatcgctacatgcggccgcaccc
gaccctaagtgccgcagcggcggccggcgccggcgcctcaccttgcacagcgtcttctct
gcctcggcccgcggccgccgcgcccgggccaagccgcaggccgagccgccgcccccggct
gcgcagccgccgcccgccccggcccctgccgcggcccagggcccgccgcccgaggcgctg
cccgccgagccggccgccgaggccgaggcggaggccgcggcggcggcggcggagcctggg
ttcgacgatgaggaggcggcggagggcggtggcccgggcgcggaggaggtggagtgtccg
ctgtgcctggtgcggctgccgcctgagcgggccccgcgcctcctcagctgtccgcaccgc
tcgtgccgggactgcctccgccactacctgcgcctggagataagcgagagcagggtgccc
atcagctgccccgagtgcagcgagcgactcaacccgcacgacatccgcttgctgctcgcc
gacccgccgcttatgcacaagtacgaggagttcatgctgcgccgctacctagcctcggac
cccgactgccgctggtgcccggccccggactgcggttatgctgttattgcctatggctgt
gccagctgcccgaagctaacttgtgagagggaaggttgccagactgagttctgctaccac
tgcaagcagatatggcatccaaatcagacatgcgatatggcccgtcaacagagggcccag
actttacgagttcggaccaaacacacttcaggtctcagttatgggcaagaatctggacca
gcagatgacatcaagccatgcccacgatgcagtgcatacattatcaagatgaatgatgga
agctgtaatcacatgacctgtgcagtgtgtggctgtgaattctgttggctttgtatgaaa
gagatctcagacttgcattacctcagcccctctggctgtacattctggggcaagaagcca
tggagccgtaagaagaaaattctttggcagctgggcacgttgattggtgctccagtgggg
atttctctcattgctggcattgccattcctgccatggtcattggcattcctgtttatgtt
ggaaggaagattcacagcaggtatgagggaaggaaaacctccaaacacaagaggaatttg
gctatcactggaggagtgactttgtcggtcattgcatccccagttattgctgcagttagt
gttggtattggtgtccccattatgctggcatatgtttatggggttgtgcccatttctctt
tgtcgtggaggcggctgtggagttagcacagccaacggaaaaggagtgaaaattgaattt
gatgaagatgatggtccaatcacagtggcagatgcctggagagccctcaagaatcccagc
attggggaaagcagcattgaaggcctgactagtgtattgagcactagtggaagccctaca
gatggacttagtgttatgcaaggtccttacagcgaaacggccagctttgcagccctctca
gggggcacgctgagtggcggcattctctccagtggcaagggaaaatatagcaggttagaa
gttcaagccgatgtccaaaaggaaattttccccaaagacacagccagtcttggtgcaatt
agtgacaacgcaagcactcgtgctatggccggttccataatcagttcctacaacccacag
gacagagaatgcaacaatatggaaatccaagtggacattgaagccaaaccaagccactat
cagctggtgagtggaagcagcacggaggactcgctccatgttcatgctcagatggcagag
aatgaagaagaaggtagtggtggcggaggcagtgaagaggatcccccctgcagacaccaa
agctgtgaacagaaagactgcctggccagcaaaccttgggacatcagcctggcccagcct
gaaagcatccgcagtgacctagagagttctgatgcacagtcagacgatgtgccagacatc
acctcagatgagtgtggctccccccgctcccatactgcagcctgcccctcgacccccaga
gcccaagacggcggacttacaggggaggcgccacctgaagacgttccagggccccataag
accctatcttccggaggggaacggatcgaccaccggtgtgtgcccacaaaaaattcaact
cctaagtcctcagtttctagtcccgggaagaaagccagaattgaaagcacctttgagatc
gaccagtccaacgccttcattcgacaaagaaggaaacgaaggcacaaggaggaagacata
aaaaccacgaggccgagtgcctacagctccctcagtcgcctcctgaggccagtggacctg
agctga

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_6|175_aa
MKALGTQQEYKVVCHCLPTPKCHTLPLYHMQIFAPNHVVAKFHFWYFLSQLKKMKKSSGE
TVNCGQVFEKYPLWVKNFGIWLRYDSRSSTHNMYREYRDLTTMGAVTQCYQDMGTQYRAR
ANFIQIMKVEEIAASKCWWPVVKQFHDSKIKFLLPHLVLCHQQKPRFTRRPNTFF

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_6|528_bp
atgaaggccttgggcacacaacaagagtacaaggtggtgtgtcactgcctgcccaccccc
aaatgccacacactgcccctctaccacatgcaaatctttgcgcctaatcatgtagtcgcc
aagttccacttctggtacttcctatctcaattaaagaagatgaagaagtcttcaggggag
actgtcaactgtgggcaggtgtttgagaagtacccactgtgggtgaagaactttggcatc
tggctgcgctatgactcccggagcagcacccacaacatgtacagggaataccgggaccta
accaccatgggcgctgtcacccagtgctaccaagacatgggcacccagtaccgcgcccgg
gccaacttcatccagatcatgaaggtggaggagattgcggccagcaagtgctggtggcca
gttgtcaagcaattccacgactccaagatcaagttcctgctgccccacttggtgctgtgc
catcagcagaagccacgcttcaccaggagacccaacaccttcttctag

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_7|232_aa
MPKELQGSMERATDCLQCPGWLPYRKDVELLHLPDREGIPELQFEHEVLENQLPEAAQEE
CYQVRDDLFQVIWPGLLSGLKRGIEYQVLVFVLLSENFLKIAWERDGRGYLLGALNTQTN
VATVVPNGNTHLEPGMLVSAGLLLHGRGLQNLILERCPQEKVNDLRLLDGQGEGLDFLQG
LDLHVLDQVAQLGDRHPFLIFILASASSMAQALTPTTIQAPMPLPKPPWKPL

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_7|699_bp
atgcccaaggagctgcagggctccatggagagagcaactgactgcctgcagtgtcctgga
tggcttccctataggaaggacgtggagctactacatcttccagacagggaaggcatccct
gagttgcagtttgaacatgaggttctagagaaccagcttcctgaagcagcacaggaagag
tgttaccaagtacgagatgacttgtttcaggtcatctggccagggctgcttagtggactc
aaaagaggtatcgagtatcaggttttggtttttgttctgctatcagaaaattttttgaag
attgcctgggagagagatggccgtggctacctcctcggagcacttaacacccagaccaac
gtggccactgtagtccccaatggcaacacacaccttgaacctggtatgctggtcagcgca
ggtctgcttttgcacgggcgtggtcttcaaaacctcatccttgagagatgcccccaggaa
aaagtcaatgatctcagactcctcgatggtcaaggagaagggctagatttcctccaggga
cttgatcttcatgtccttgaccaggtagcccaacttggtgacaggcatccattcctcatc
ttcatccttgcctctgcaagctccatggcccaggccctgaccccaaccactatccaggcc
ccaatgccactgccaaagcctccgtggaaaccactatga

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_8|239_aa
MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_8|720_bp
atggctcccagcgtgccagcggcagaacccgagtatcctaaaggcatccgggccgtgctg
ctggggcctcccggggccggtaaagggacccaggcacccagattggctgaaaacttctgt
gtctgccatttagctactggggacatgctgagggccatggtggcttctggctcagagcta
ggaaaaaagctgaaggcaactatggatgctgggaaactggtgagtgatgaaatggtagtg
gagctcattgagaagaatttggagacccccttgtgcaaaaatggttttcttctggatggc
ttccctcggactgtgaggcaggcagaaatgctcgatgacctcatggagaagaggaaagag
aagcttgattctgtgattgaattcagcatcccagactctctgctgatccgaagaatcaca
ggaaggctgattcaccccaagagtggccgttcctaccacgaggagttcaaccctccaaaa
gagcccatgaaagatgacatcaccggggaacccttgatccgtcgatcagatgataatgaa
aaggccttgaaaatccgcctgcaagcctaccacactcaaaccaccccactcatagagtac
tacaggaaacgggggatccactccgccatcgatgcatcccagacccccgatgtcgtgttc
gcaagcatcctagcagccttctccaaagccacatgtaaagacttggttatgtttatctaa

>gi568815597r:32836809_33064685|GENSCAN_predicted_peptide_9|44_aa
VLPSTQAYHKADCRLTRESLIDLSSMTTLERTFTLEKSPTLGAR

>gi568815597r:32836809_33064685|GENSCAN_predicted_CDS_9|135_bp
gttcttccgagcacacaagcttaccacaaggctgactgtagacttactcgggaatctctc
attgacttgtcctcaatgaccacgctcgagcgtaccttcaccctagagaaaagccccacg
ttgggcgccagatga